6dxp - Revision history

OCA at 06:15, 11 October 2023

2023-10-11T06:15:26Z

←Older revision		Revision as of 06:15, 11 October 2023
Line 3:		Line 3:
	<StructureSection load='6dxp' size='340' side='right'caption='[[6dxp]], [[Resolution\|resolution]] 2.48Å' scene=''>		<StructureSection load='6dxp' size='340' side='right'caption='[[6dxp]], [[Resolution\|resolution]] 2.48Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6dxp]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DXP OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=6DXP FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6dxp]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Klebsiella_pneumoniae Klebsiella pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DXP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6DXP FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.478Å</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=6dxp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dxp OCA], [~~http~~://pdbe.org/6dxp PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=6dxp RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/6dxp PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=6dxp ProSAT]</span></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6dxp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dxp OCA], [https://pdbe.org/6dxp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6dxp RCSB], [https://www.ebi.ac.uk/pdbsum/6dxp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6dxp ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/~~A0A1W1JPX6_KLEPN A0A1W1JPX6_KLEPN]~~] Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines~~. Requires NADH, but not NADPH, as an electron donor for its activity~~.[HAMAP-Rule:MF_01216][~~SAAS~~:~~SAAS00096932~~]	+	[https://www.uniprot.org/uniprot/A6TCS9_KLEP7 A6TCS9_KLEP7] Also exhibits azoreductase activity. Catalyzes the reductive cleavage of the azo bond in aromatic azo compounds to the corresponding amines.[HAMAP-Rule:MF_01216] Quinone reductase that provides resistance to thiol-specific stress caused by electrophilic quinones.[HAMAP-Rule:MF_01216]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Klebsiella pneumoniae]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Almo~~, S C~~]]	+	[[Category: Almo SC]]
-	[[Category: Arcinas~~, A J~~]]	+	[[Category: Arcinas AJ]]
-	[[Category: Bonanno~~, J B~~]]	+	[[Category: Bonanno JB]]
-	[[Category: Chamala, S]]	+	[[Category: Chamala S]]
-	[[Category: Ghosh, A]]	+	[[Category: Ghosh A]]
-	[[Category: Kelly, L]]	+	[[Category: Kelly L]]
-	~~[[Category: Azoreductase]]~~	+
-	~~[[Category: Oxidoreductase~~]]	+

OCA at 09:08, 11 November 2020

2020-11-11T09:08:53Z

←Older revision		Revision as of 09:08, 11 November 2020
Line 1:		Line 1:

	==The crystal structure of an FMN-dependent NADH-azoreductase from Klebsiella pneumoniae==		==The crystal structure of an FMN-dependent NADH-azoreductase from Klebsiella pneumoniae==
-	<StructureSection load='6dxp' size='340' side='right' caption='[[6dxp]], [[Resolution\|resolution]] 2.48Å' scene=''>	+	<StructureSection load='6dxp' size='340' side='right'caption='[[6dxp]], [[Resolution\|resolution]] 2.48Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6dxp]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DXP OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6DXP FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6dxp]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DXP OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6DXP FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6dxp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dxp OCA], [http://pdbe.org/6dxp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6dxp RCSB], [http://www.ebi.ac.uk/pdbsum/6dxp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6dxp ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6dxp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dxp OCA], [http://pdbe.org/6dxp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6dxp RCSB], [http://www.ebi.ac.uk/pdbsum/6dxp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6dxp ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Almo, S C]]		[[Category: Almo, S C]]
	[[Category: Arcinas, A J]]		[[Category: Arcinas, A J]]

OCA at 07:20, 25 July 2018

2018-07-25T07:20:33Z

←Older revision		Revision as of 07:20, 25 July 2018
Line 1:		Line 1:
-	'''Unreleased structure'''

-	The ~~entry~~ 6dxp is ~~ON HOLD~~	+	==The crystal structure of an FMN-dependent NADH-azoreductase from Klebsiella pneumoniae==
-		+	<StructureSection load='6dxp' size='340' side='right' caption='[[6dxp]], [[Resolution\|resolution]] 2.48Å' scene=''>
-	~~Authors~~: ~~Arcinas, A~~.J., ~~Ghosh, A~~., ~~Chamala, S~~., ~~Bonanno, J~~.B., ~~Kelly, L~~., ~~Almo, S~~.C.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[6dxp]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DXP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6DXP FirstGlance]. <br>
-	~~Description~~: ~~The crystal structure~~ of an ~~FMN~~-~~dependent NADH-azoreductase from Klebsiella pneumoniae~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6dxp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dxp OCA], [http://pdbe.org/6dxp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6dxp RCSB], [http://www.ebi.ac.uk/pdbsum/6dxp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6dxp ProSAT]</span></td></tr>
-	[[Category: ~~Almo~~, ~~S.C~~]]	+	</table>
-	[[Category: Bonanno, J.B]]	+	== Function ==
		+	[[http://www.uniprot.org/uniprot/A0A1W1JPX6_KLEPN A0A1W1JPX6_KLEPN]] Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity.[HAMAP-Rule:MF_01216][SAAS:SAAS00096932]
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Almo, S C]]
		+	[[Category: Arcinas, A J]]
		+	[[Category: Bonanno, J B]]
	[[Category: Chamala, S]]		[[Category: Chamala, S]]
	[[Category: Ghosh, A]]		[[Category: Ghosh, A]]
	[[Category: Kelly, L]]		[[Category: Kelly, L]]
-	[[Category: ~~Arcinas, A.J~~]]	+	[[Category: Azoreductase]]
		+	[[Category: Oxidoreductase]]

OCA: Protected "6dxp" [edit=sysop:move=sysop]

2018-07-11T04:05:50Z

Protected "6dxp" [edit=sysop:move=sysop]

←Older revision

Revision as of 04:05, 11 July 2018

OCA: New page: '''Unreleased structure''' The entry 6dxp is ON HOLD Authors: Arcinas, A.J., Ghosh, A., Chamala, S., Bonanno, J.B., Kelly, L., Almo, S.C. Description: The crystal structure of an FMN-d...

2018-07-11T04:05:49Z

New page: '''Unreleased structure''' The entry 6dxp is ON HOLD Authors: Arcinas, A.J., Ghosh, A., Chamala, S., Bonanno, J.B., Kelly, L., Almo, S.C. Description: The crystal structure of an FMN-d...

New page

'''Unreleased structure'''

The entry 6dxp is ON HOLD

Authors: Arcinas, A.J., Ghosh, A., Chamala, S., Bonanno, J.B., Kelly, L., Almo, S.C.

Description: The crystal structure of an FMN-dependent NADH-azoreductase from Klebsiella pneumoniae
[[Category: Unreleased Structures]]
[[Category: Almo, S.C]]
[[Category: Bonanno, J.B]]
[[Category: Chamala, S]]
[[Category: Ghosh, A]]
[[Category: Kelly, L]]
[[Category: Arcinas, A.J]]