6ekb - Revision history

OCA at 12:19, 9 May 2024

2024-05-09T12:19:37Z

←Older revision		Revision as of 12:19, 9 May 2024
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	==Crystal structure of the BSD2 homolog of Arabidopsis thaliana==		==Crystal structure of the BSD2 homolog of Arabidopsis thaliana==
-	<StructureSection load='6ekb' size='340' side='right' caption='[[6ekb]], [[Resolution\|resolution]] 1.90Å' scene=''>	+	<StructureSection load='6ekb' size='340' side='right'caption='[[6ekb]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6ekb]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Arath Arath~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EKB OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6EKB FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6ekb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EKB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6EKB FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat"~~><scene name~~=~~'pdbligand=ZN:ZINC+ION'>ZN</scene~~></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.9Å</td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat">~~F1P2.200, At3g47650 ([http~~:/~~/www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])~~</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6ekb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ekb OCA], [~~http~~://pdbe.org/6ekb PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=6ekb RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/6ekb PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=6ekb ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ekb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ekb OCA], [https://pdbe.org/6ekb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ekb RCSB], [https://www.ebi.ac.uk/pdbsum/6ekb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ekb ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/BSD2_ARATH BSD2_ARATH] Chloroplast chaperone required for RuBisCo biogenesis and translational regulation of the RuBisCo large subunit (RbcL) (PubMed:29217567). Stabilizes an end-state assembly intermediate of eight RbcL subunits until the small subunits (RBCSs) become available to produce a complete stable RuBisCo complex containing eight small and eight large subunits (PubMed:29217567).<ref>PMID:29217567</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	</div>		</div>
	<div class="pdbe-citations 6ekb" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 6ekb" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Heat Shock Protein structures\|Heat Shock Protein structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Arath~~]]	+	[[Category: Arabidopsis thaliana]]
-	[[Category: Aigner, H]]	+	[[Category: Large Structures]]
-	[[Category: Bhat~~, J Y~~]]	+	[[Category: Aigner H]]
-	[[Category: Bracher, A]]	+	[[Category: Bhat JY]]
-	[[Category: Calisse, L]]	+	[[Category: Bracher A]]
-	[[Category: Hartl~~, F U~~]]	+	[[Category: Calisse L]]
-	[[Category: Hayer-Hartl, M]]	+	[[Category: Hartl FU]]
-	[[Category: Wilson~~, R H]]~~	+	[[Category: Hayer-Hartl M]]
-	~~[[Category: Assembly chaperone]]~~	+	[[Category: Wilson RH]]
-	~~[[Category: Chaperone]]~~	+
-	~~[[Category: Rubisco]]~~	+
-	~~[[Category: Zinc finger~~]]	+

OCA at 06:46, 20 December 2017

2017-12-20T06:46:44Z

←Older revision		Revision as of 06:46, 20 December 2017
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	<StructureSection load='6ekb' size='340' side='right' caption='[[6ekb]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='6ekb' size='340' side='right' caption='[[6ekb]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6ekb]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EKB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6EKB FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6ekb]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EKB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6EKB FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">F1P2.200, At3g47650 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ekb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ekb OCA], [http://pdbe.org/6ekb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ekb RCSB], [http://www.ebi.ac.uk/pdbsum/6ekb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ekb ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ekb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ekb OCA], [http://pdbe.org/6ekb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ekb RCSB], [http://www.ebi.ac.uk/pdbsum/6ekb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ekb ProSAT]</span></td></tr>
	</table>		</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Plant RuBisCo, a complex of eight large and eight small subunits, catalyzes the fixation of CO2 in photosynthesis. The low catalytic efficiency of RuBisCo provides strong motivation to reengineer the enzyme with the goal of increasing crop yields. However, genetic manipulation has been hampered by the failure to express plant RuBisCo in a bacterial host. We achieved the functional expression of Arabidopsis thaliana RuBisCo in Escherichia coli by coexpressing multiple chloroplast chaperones. These include the chaperonins Cpn60/Cpn20, RuBisCo accumulation factors 1 and 2, RbcX, and bundle-sheath defective-2 (BSD2). Our structural and functional analysis revealed the role of BSD2 in stabilizing an end-state assembly intermediate of eight RuBisCo large subunits until the small subunits become available. The ability to produce plant RuBisCo recombinantly will facilitate efforts to improve the enzyme through mutagenesis.
		+
		+	Plant RuBisCo assembly in E. coli with five chloroplast chaperones including BSD2.,Aigner H, Wilson RH, Bracher A, Calisse L, Bhat JY, Hartl FU, Hayer-Hartl M Science. 2017 Dec 8;358(6368):1272-1278. doi: 10.1126/science.aap9221. PMID:29217567<ref>PMID:29217567</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 6ekb" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Arath]]
	[[Category: Aigner, H]]		[[Category: Aigner, H]]
	[[Category: Bhat, J Y]]		[[Category: Bhat, J Y]]

OCA at 07:26, 6 December 2017

2017-12-06T07:26:42Z

←Older revision		Revision as of 07:26, 6 December 2017
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 6ekb is ~~ON HOLD until Paper Publication~~	+	==Crystal structure of the BSD2 homolog of Arabidopsis thaliana==
-		+	<StructureSection load='6ekb' size='340' side='right' caption='[[6ekb]], [[Resolution\|resolution]] 1.90Å' scene=''>
-	~~Authors~~:	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[6ekb]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EKB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6EKB FirstGlance]. <br>
-	~~Description~~:	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ekb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ekb OCA], [http://pdbe.org/6ekb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ekb RCSB], [http://www.ebi.ac.uk/pdbsum/6ekb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ekb ProSAT]</span></td></tr>
		+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Aigner, H]]
		+	[[Category: Bhat, J Y]]
		+	[[Category: Bracher, A]]
		+	[[Category: Calisse, L]]
		+	[[Category: Hartl, F U]]
		+	[[Category: Hayer-Hartl, M]]
		+	[[Category: Wilson, R H]]
		+	[[Category: Assembly chaperone]]
		+	[[Category: Chaperone]]
		+	[[Category: Rubisco]]
		+	[[Category: Zinc finger]]

OCA: Protected "6ekb" [edit=sysop:move=sysop]

2017-10-04T08:18:23Z

Protected "6ekb" [edit=sysop:move=sysop]

←Older revision

Revision as of 08:18, 4 October 2017

OCA: New page: '''Unreleased structure''' The entry 6ekb is ON HOLD until Paper Publication Authors: Description: Category: Unreleased Structures

2017-10-04T08:18:22Z

New page: '''Unreleased structure''' The entry 6ekb is ON HOLD until Paper Publication Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 6ekb is ON HOLD until Paper Publication

Authors:

Description:
[[Category: Unreleased Structures]]