6fsj - Revision history

OCA at 06:36, 9 May 2018

2018-05-09T06:36:53Z

←Older revision		Revision as of 06:36, 9 May 2018
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	== Function ==		== Function ==
	[[http://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK]] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>		[[http://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK]] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The identification of initial lead conditions for successful protein crystallization is crucial for structural studies using X-ray crystallography. In order to reduce the number of false-negative conditions, an emerging number of fluorescence-based methods have been developed which allow more efficient identification of protein crystals and help to distinguish them from salt crystals. Detection of the native tryptophan fluorescence of protein crystals is one of the most widely used methods. However, this method can fail owing to the properties of the crystallized protein or the chemical composition of the crystallization trials. Here, a simple, fast and cost-efficient method employing 2,2,2-trichloroethanol (TCE) has been developed. It can be performed with a standard UV-light microscope and can be applied to cases in which detection of native tryptophan fluorescence fails. In four test cases this method had no effect on the diffraction properties of the crystals and no structural changes were observed. Further evidence is provided that TCE can be added to crystallization trials during their preparation, making this method compatible with high-throughput approaches.
		+
		+	Improved protein-crystal identification by using 2,2,2-trichloroethanol as a fluorescence enhancer.,Pichlo C, Toelzer C, Chojnacki K, Ocal S, Uthoff M, Ruegenberg S, Hermanns T, Schacherl M, Denzel MS, Hofmann K, Niefind K, Baumann U Acta Crystallogr F Struct Biol Commun. 2018 May 1;74(Pt 5):307-314. doi:, 10.1107/S2053230X18005253. Epub 2018 Apr 24. PMID:29717999<ref>PMID:29717999</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 6fsj" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 08:17, 2 May 2018

2018-05-02T08:17:00Z

←Older revision		Revision as of 08:17, 2 May 2018
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-	'''Unreleased structure'''

-	~~The entry~~ 6fsj is ~~ON HOLD~~	+	==Crystal structure of TCE-treated Lysozyme==
-		+	<StructureSection load='6fsj' size='340' side='right' caption='[[6fsj]], [[Resolution\|resolution]] 1.20Å' scene=''>
-	~~Authors~~: ~~Pichlo~~, C., ~~Baumann~~, U.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[6fsj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6FSJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6FSJ FirstGlance]. <br>
-	~~Description~~: ~~Crystal structure of TCE~~-~~treated~~ Lysozyme	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5n12\|5n12]]</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6fsj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6fsj OCA], [http://pdbe.org/6fsj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6fsj RCSB], [http://www.ebi.ac.uk/pdbsum/6fsj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6fsj ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK]] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Gallus gallus]]
		+	[[Category: Lysozyme]]
		+	[[Category: Baumann, U]]
	[[Category: Pichlo, C]]		[[Category: Pichlo, C]]
-	[[Category: ~~Baumann, U~~]]	+	[[Category: Hydrolase]]
		+	[[Category: Tce-treatment]]

OCA: Protected "6fsj" [edit=sysop:move=sysop]

2018-02-28T05:12:22Z

Protected "6fsj" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:12, 28 February 2018

OCA: New page: '''Unreleased structure''' The entry 6fsj is ON HOLD Authors: Pichlo, C., Baumann, U. Description: Crystal structure of TCE-treated Lysozyme Category: Unreleased Structures [[Categ...

2018-02-28T05:12:21Z

New page: '''Unreleased structure''' The entry 6fsj is ON HOLD Authors: Pichlo, C., Baumann, U. Description: Crystal structure of TCE-treated Lysozyme Category: Unreleased Structures [[Categ...

New page

'''Unreleased structure'''

The entry 6fsj is ON HOLD

Authors: Pichlo, C., Baumann, U.

Description: Crystal structure of TCE-treated Lysozyme
[[Category: Unreleased Structures]]
[[Category: Pichlo, C]]
[[Category: Baumann, U]]