6hzk - Revision history

OCA at 11:43, 24 January 2024

2024-01-24T11:43:00Z

←Older revision		Revision as of 11:43, 24 January 2024
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	<StructureSection load='6hzk' size='340' side='right'caption='[[6hzk]], [[Resolution\|resolution]] 2.40Å' scene=''>		<StructureSection load='6hzk' size='340' side='right'caption='[[6hzk]], [[Resolution\|resolution]] 2.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6hzk]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Anacystis_nidulans Anacystis nidulans~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HZK OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6HZK FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6hzk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechococcus_elongatus_PCC_6301 Synechococcus elongatus PCC 6301]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HZK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6HZK FirstGlance]. <br>
-	</td></tr><tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>prk, syc0567_d ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id~~=269084 Anacystis nidulans])</td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.4Å</td></tr>
-	~~<tr id='activity'><td class~~="~~sblockLbl~~">~~<b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>~~[~~http://en.wikipedia.org/wiki/Phosphoribulokinase Phosphoribulokinase~~]~~, with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=~~2.~~7.1.19 2.7.1.19] </span>~~</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6hzk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hzk OCA], [https://pdbe.org/6hzk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6hzk RCSB], [https://www.ebi.ac.uk/pdbsum/6hzk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6hzk ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6hzk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hzk OCA], [~~http~~://pdbe.org/6hzk PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=6hzk RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/6hzk PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=6hzk ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A0A0H3K6J7_SYNP6 A0A0H3K6J7_SYNP6]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Anacystis nidulans]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Phosphoribulokinase~~]]	+	[[Category: Synechococcus elongatus PCC 6301]]
-	[[Category: Bracher, A]]	+	[[Category: Bracher A]]
-	[[Category: Hartl~~, F U~~]]	+	[[Category: Hartl FU]]
-	[[Category: Hayer-Hartl, M]]	+	[[Category: Hayer-Hartl M]]
-	[[Category: Wilson~~, R H]]~~	+	[[Category: Wilson RH]]
-	~~[[Category: Calvin cycle]]~~	+
-	~~[[Category: Transferase~~]]	+

OCA at 06:54, 17 April 2019

2019-04-17T06:54:17Z

←Older revision		Revision as of 06:54, 17 April 2019
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	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6hzk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hzk OCA], [http://pdbe.org/6hzk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6hzk RCSB], [http://www.ebi.ac.uk/pdbsum/6hzk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6hzk ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6hzk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hzk OCA], [http://pdbe.org/6hzk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6hzk RCSB], [http://www.ebi.ac.uk/pdbsum/6hzk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6hzk ProSAT]</span></td></tr>
	</table>		</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Phosphoribulokinase (PRK) catalyses the ATP-dependent phosphorylation of ribulose 5-phosphate to give ribulose 1,5-bisphosphate. Regulation of this reaction in response to light controls carbon fixation during photosynthesis. Here, the crystal structure of PRK from the cyanobacterium Synechococcus sp. strain PCC 6301 is presented. The enzyme is dimeric and has an alpha/beta-fold with an 18-stranded beta-sheet at its core. Interestingly, a disulfide bond is found between Cys40 and the P-loop residue Cys18, revealing the structural basis for the redox inactivation of PRK activity. A second disulfide bond appears to rigidify the dimer interface and may thereby contribute to regulation by the adaptor protein CP12 and glyceraldehyde-3-phosphate dehydrogenase.
		+
		+	Crystal structure of phosphoribulokinase from Synechococcus sp. strain PCC 6301.,Wilson RH, Hayer-Hartl M, Bracher A Acta Crystallogr F Struct Biol Commun. 2019 Apr 1;75(Pt 4):278-289. doi:, 10.1107/S2053230X19002693. Epub 2019 Apr 2. PMID:30950829<ref>PMID:30950829</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 6hzk" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 07:50, 10 April 2019

2019-04-10T07:50:48Z

←Older revision		Revision as of 07:50, 10 April 2019
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	<StructureSection load='6hzk' size='340' side='right'caption='[[6hzk]], [[Resolution\|resolution]] 2.40Å' scene=''>		<StructureSection load='6hzk' size='340' side='right'caption='[[6hzk]], [[Resolution\|resolution]] 2.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[6hzk]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HZK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6HZK FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6hzk]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Anacystis_nidulans Anacystis nidulans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HZK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6HZK FirstGlance]. <br>
-	</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphoribulokinase Phosphoribulokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.19 2.7.1.19] </span></td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">prk, syc0567_d ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=269084 Anacystis nidulans])</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphoribulokinase Phosphoribulokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.19 2.7.1.19] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6hzk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hzk OCA], [http://pdbe.org/6hzk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6hzk RCSB], [http://www.ebi.ac.uk/pdbsum/6hzk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6hzk ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6hzk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hzk OCA], [http://pdbe.org/6hzk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6hzk RCSB], [http://www.ebi.ac.uk/pdbsum/6hzk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6hzk ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Anacystis nidulans]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Phosphoribulokinase]]		[[Category: Phosphoribulokinase]]

OCA at 06:39, 27 March 2019

2019-03-27T06:39:39Z

←Older revision		Revision as of 06:39, 27 March 2019
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 6hzk ~~is ON HOLD until Paper Publication~~	+	==Crystal structure of redox-inhibited phosphoribulokinase from Synechococcus sp. (strain PCC 6301)==
-		+	<StructureSection load='6hzk' size='340' side='right'caption='[[6hzk]], [[Resolution\|resolution]] 2.40Å' scene=''>
-	~~Authors~~:	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[6hzk]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HZK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6HZK FirstGlance]. <br>
-	~~Description~~:	+	</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphoribulokinase Phosphoribulokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.19 2.7.1.19] </span></td></tr>
-	[[Category: ~~Unreleased~~ Structures]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6hzk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hzk OCA], [http://pdbe.org/6hzk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6hzk RCSB], [http://www.ebi.ac.uk/pdbsum/6hzk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6hzk ProSAT]</span></td></tr>
		+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Large Structures]]
		+	[[Category: Phosphoribulokinase]]
		+	[[Category: Bracher, A]]
		+	[[Category: Hartl, F U]]
		+	[[Category: Hayer-Hartl, M]]
		+	[[Category: Wilson, R H]]
		+	[[Category: Calvin cycle]]
		+	[[Category: Transferase]]

OCA at 10:33, 7 November 2018

2018-11-07T10:33:38Z

←Older revision		Revision as of 10:33, 7 November 2018
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 6hzk is ON HOLD	+	The entry 6hzk is ON HOLD until Paper Publication

	Authors:		Authors:

OCA: Protected "6hzk" [edit=sysop:move=sysop]

2018-10-31T05:14:12Z

Protected "6hzk" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:14, 31 October 2018

OCA: New page: '''Unreleased structure''' The entry 6hzk is ON HOLD Authors: Description: Category: Unreleased Structures

2018-10-31T05:14:11Z

New page: '''Unreleased structure''' The entry 6hzk is ON HOLD Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 6hzk is ON HOLD

Authors:

Description:
[[Category: Unreleased Structures]]