6le3 - Revision history

OCA at 10:57, 22 November 2023

2023-11-22T10:57:57Z

←Older revision		Revision as of 10:57, 22 November 2023
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	==Crystal structure of gluconate 5-dehydrogenase from Lentibacter algarum==		==Crystal structure of gluconate 5-dehydrogenase from Lentibacter algarum==
-	<StructureSection load='6le3' size='340' side='right'caption='[[6le3]]' scene=''>	+	<StructureSection load='6le3' size='340' side='right'caption='[[6le3]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6LE3 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=6LE3 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[6le3]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Lentibacter_algarum Lentibacter algarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6LE3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6LE3 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=6le3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6le3 OCA], [~~http~~://pdbe.org/6le3 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=6le3 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/6le3 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=6le3 ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.1Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6le3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6le3 OCA], [https://pdbe.org/6le3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6le3 RCSB], [https://www.ebi.ac.uk/pdbsum/6le3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6le3 ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A0A1H3NGY9_9RHOB A0A1H3NGY9_9RHOB]
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Gluconate 5-dehydrogenase (Ga5DH; EC 1.1.1.69) from Lentibacter algarum (LaGa5DH) was recombinantly expressed in Escherichia coli and purified to homogeneity. The protein was crystallized and the crystal structure was solved at 2.1 A resolution. The crystal belonged to the monoclinic system, with space group P1 and unit-cell parameters a = 55.42, b = 55.48, c = 79.16 A, alpha = 100.51, beta = 105.66, gamma = 97.99 degrees . The structure revealed LaGaDH to be a tetramer, with each subunit consisting of six alpha-helices and three antiparallel beta-hairpins. LaGa5DH has high structural similarity to other Ga5DH proteins, demonstrating that this enzyme is highly conserved.
		+
		+	Crystal structure of gluconate 5-dehydrogenase from Lentibacter algarum.,Tian D, Fu X, Cao W, Yuan H Acta Crystallogr F Struct Biol Commun. 2020 May 1;76(Pt 5):228-234. doi:, 10.1107/S2053230X20005336. Epub 2020 Apr 29. PMID:32356525<ref>PMID:32356525</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 6le3" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
		+	[[Category: Lentibacter algarum]]
	[[Category: Yuan H]]		[[Category: Yuan H]]

OCA at 05:25, 13 May 2020

2020-05-13T05:25:38Z

←Older revision		Revision as of 05:25, 13 May 2020
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-	'''Unreleased structure'''

-	~~The entry 6le3 is ON HOLD until Paper Publication~~	+	==Crystal structure of gluconate 5-dehydrogenase from Lentibacter algarum==
-		+	<StructureSection load='6le3' size='340' side='right'caption='[[6le3]]' scene=''>
-	~~Authors: Yuan, H.~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6LE3 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6LE3 FirstGlance]. <br>
-	~~Description:~~ Crystal structure of gluconate 5-dehydrogenase from Lentibacter algarum	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6le3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6le3 OCA], [http://pdbe.org/6le3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6le3 RCSB], [http://www.ebi.ac.uk/pdbsum/6le3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6le3 ProSAT]</span></td></tr>
-	[[Category: ~~Unreleased~~ Structures]]	+	</table>
-	[[Category: Yuan, H]]	+	__TOC__
		+	</StructureSection>
		+	[[Category: Large Structures]]
		+	[[Category: Yuan H]]

OCA at 05:37, 18 December 2019

2019-12-18T05:37:26Z

←Older revision		Revision as of 05:37, 18 December 2019
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 6le3 is ON HOLD	+	The entry 6le3 is ON HOLD until Paper Publication

	Authors: Yuan, H.		Authors: Yuan, H.

OCA: Protected "6le3" [edit=sysop:move=sysop]

2019-12-04T06:17:51Z

Protected "6le3" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:17, 4 December 2019

OCA: New page: '''Unreleased structure''' The entry 6le3 is ON HOLD Authors: Yuan, H. Description: Crystal structure of gluconate 5-dehydrogenase from Lentibacter algarum [[Category: Unreleased Struc...

2019-12-04T06:17:50Z

New page: '''Unreleased structure''' The entry 6le3 is ON HOLD Authors: Yuan, H. Description: Crystal structure of gluconate 5-dehydrogenase from Lentibacter algarum [[Category: Unreleased Struc...

New page

'''Unreleased structure'''

The entry 6le3 is ON HOLD

Authors: Yuan, H.

Description: Crystal structure of gluconate 5-dehydrogenase from Lentibacter algarum
[[Category: Unreleased Structures]]
[[Category: Yuan, H]]