OCA at 15:36, 29 November 2023

2023-11-29T15:36:55Z

←Older revision		Revision as of 15:36, 29 November 2023
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	==Crystal structure of cyclic alpha-maltosyl-1,6-maltose binding protein from Arthrobacter globiformis==		==Crystal structure of cyclic alpha-maltosyl-1,6-maltose binding protein from Arthrobacter globiformis==
-	<StructureSection load='7bvt' size='340' side='right'caption='[[7bvt]]' scene=''>	+	<StructureSection load='7bvt' size='340' side='right'caption='[[7bvt]], [[Resolution\|resolution]] 1.47Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7BVT OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=7BVT FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[7bvt]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arthrobacter_globiformis Arthrobacter globiformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7BVT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7BVT FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=7bvt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7bvt OCA], [~~http~~://pdbe.org/7bvt PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=7bvt RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/7bvt PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=7bvt ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.47Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7bvt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7bvt OCA], [https://pdbe.org/7bvt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7bvt RCSB], [https://www.ebi.ac.uk/pdbsum/7bvt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7bvt ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/D2YYD8_ARTGO D2YYD8_ARTGO]
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Cyclic alpha-maltosyl-(1-->6)-maltose (CMM) is a cyclic glucotetrasaccharide with alternating alpha-1,4 and alpha-1,6 linkages. Here, we report functional and structural analyses on CMM-binding protein (CMMBP), which is a substrate-binding protein (SBP) of an ABC importer system of the bacteria Arthrobacter globiformis. Isothermal titration calorimetry analysis revealed that CMMBP specifically bound to CMM with a Kd value of 9.6 nM. The crystal structure of CMMBP was determined at a resolution of 1.47 A, and a panose molecule was bound in a cleft between two domains. To delineate its structural features, the crystal structure of CMMBP was compared with other SBPs specific for carbohydrates, such as cyclic alpha-nigerosyl-(1-->6)-nigerose and cyclodextrins. These results indicate that A. globiformis has a unique metabolic pathway specialized for CMM.
		+
		+	Molecular analysis of cyclic alpha-maltosyl-(1-->6)-maltose binding protein in the bacterial metabolic pathway.,Kohno M, Arakawa T, Sunagawa N, Mori T, Igarashi K, Nishimoto T, Fushinobu S PLoS One. 2020 Nov 19;15(11):e0241912. doi: 10.1371/journal.pone.0241912. , eCollection 2020. PMID:33211750<ref>PMID:33211750</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 7bvt" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Arthrobacter globiformis]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Arakawa T]]		[[Category: Arakawa T]]

OCA at 07:54, 2 December 2020

2020-12-02T07:54:10Z

←Older revision		Revision as of 07:54, 2 December 2020
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-	'''Unreleased structure'''

-	~~The entry~~ 7bvt is ~~ON HOLD until Paper Publication~~	+	==Crystal structure of cyclic alpha-maltosyl-1,6-maltose binding protein from Arthrobacter globiformis==
-		+	<StructureSection load='7bvt' size='340' side='right'caption='[[7bvt]]' scene=''>
-	~~Authors~~:	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7BVT OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=7BVT FirstGlance]. <br>
-	~~Description~~:	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=7bvt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7bvt OCA], [http://pdbe.org/7bvt PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=7bvt RCSB], [http://www.ebi.ac.uk/pdbsum/7bvt PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=7bvt ProSAT]</span></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Large Structures]]
		+	[[Category: Arakawa T]]
		+	[[Category: Fushinobu S]]
		+	[[Category: Kohno M]]
		+	[[Category: Mori T]]
		+	[[Category: Nishimoto T]]

OCA: Protected "7bvt" [edit=sysop:move=sysop]

2020-04-22T04:36:44Z

Protected "7bvt" [edit=sysop:move=sysop]

←Older revision

Revision as of 04:36, 22 April 2020

OCA: New page: '''Unreleased structure''' The entry 7bvt is ON HOLD until Paper Publication Authors: Description: Category: Unreleased Structures

2020-04-22T04:36:43Z

New page: '''Unreleased structure''' The entry 7bvt is ON HOLD until Paper Publication Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 7bvt is ON HOLD until Paper Publication

Authors:

Description:
[[Category: Unreleased Structures]]

7bvt - Revision history

OCA at 15:36, 29 November 2023

OCA at 07:54, 2 December 2020

OCA: Protected "7bvt" [edit=sysop:move=sysop]

OCA: New page: '''Unreleased structure''' The entry 7bvt is ON HOLD until Paper Publication Authors: Description: Category: Unreleased Structures