7cw5 - Revision history

OCA at 16:17, 29 November 2023

2023-11-29T16:17:24Z

←Older revision		Revision as of 16:17, 29 November 2023
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	<StructureSection load='7cw5' size='340' side='right'caption='[[7cw5]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='7cw5' size='340' side='right'caption='[[7cw5]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[7cw5]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Baccr Baccr~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7CW5 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=7CW5 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[7cw5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_cereus_ATCC_14579 Bacillus cereus ATCC 14579]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7CW5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7CW5 FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=COA:COENZYME+A'>COA</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2Å</td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>BC_5344 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~226900 BACCR])</td~~><~~/tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=COA:COENZYME+A'>COA</scene></td></tr>
-	~~<tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b></td><td class="sblockDat"><span class='plainlinks~~'>~~[http://en.wikipedia.org/wiki/Acetyl-CoA_C-acetyltransferase Acetyl-CoA C-acetyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.9 2.3.1.9]~~ </~~span~~></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7cw5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7cw5 OCA], [https://pdbe.org/7cw5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7cw5 RCSB], [https://www.ebi.ac.uk/pdbsum/7cw5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7cw5 ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=7cw5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7cw5 OCA], [~~http~~://pdbe.org/7cw5 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=7cw5 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/7cw5 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=7cw5 ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q814S6_BACCR Q814S6_BACCR]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Acetyl-CoA C-acetyltransferase]]~~	+	[[Category: Bacillus cereus ATCC 14579]]
-	~~[[Category: Baccr~~]]	+
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Hong, J]]	+	[[Category: Hong J]]
-	[[Category: Kim~~, K J]]~~	+	[[Category: Kim KJ]]
-	~~[[Category: Acetyl-coa acetyltransferase]]~~	+
-	~~[[Category: Transferase~~]]	+

OCA at 07:17, 25 November 2020

2020-11-25T07:17:13Z

←Older revision		Revision as of 07:17, 25 November 2020
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	==Acetyl-CoA acetyltransferase from Bacillus cereus ATCC 14579==		==Acetyl-CoA acetyltransferase from Bacillus cereus ATCC 14579==
-	<StructureSection load='7cw5' size='340' side='right'caption='[[7cw5]]' scene=''>	+	<StructureSection load='7cw5' size='340' side='right'caption='[[7cw5]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7CW5 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=7CW5 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[7cw5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Baccr Baccr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7CW5 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=7CW5 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=7cw5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7cw5 OCA], [http://pdbe.org/7cw5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=7cw5 RCSB], [http://www.ebi.ac.uk/pdbsum/7cw5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=7cw5 ProSAT]</span></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=COA:COENZYME+A'>COA</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BC_5344 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=226900 BACCR])</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Acetyl-CoA_C-acetyltransferase Acetyl-CoA C-acetyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.9 2.3.1.9] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=7cw5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7cw5 OCA], [http://pdbe.org/7cw5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=7cw5 RCSB], [http://www.ebi.ac.uk/pdbsum/7cw5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=7cw5 ProSAT]</span></td></tr>
	</table>		</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Bacillus cereus ATCC 14579 is a known polyhydroxybutyrate (PHB)-producing microorganism that possesses genes associated with PHB synthesis such as PhaA, PhaB, and PHA synthases. PhaA (i.e., thiolase) is the first enzyme in the PHA biosynthetic pathway, which catalyze the condensation of two acetyl-CoA molecules to acetoacetyl-CoA. Our study elucidated the crystal structure of PhaA in Bacillus cereus ATCC 14579 (BcTHL) in its apo- and CoA-bound forms. BcTHL adopts a type II biosynthetic thiolase structure by forming a tetramer. The crystal structure of CoA-complexed BcTHL revealed that the substrate binding site of BcTHL is constituted by different residues compared with other known thiolases. Our study also revealed that Arg221, a residue involved in ADP binding, undergoes a positional conformational change upon the binding of the CoA molecule.
		+
		+	Crystal structure of an acetyl-CoA acetyltransferase from PHB producing bacterium Bacillus cereus ATCC 14579.,Hong J, Park W, Seo H, Kim IK, Kim KJ Biochem Biophys Res Commun. 2020 Sep 21. pii: S0006-291X(20)31789-7. doi:, 10.1016/j.bbrc.2020.09.048. PMID:32972748<ref>PMID:32972748</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 7cw5" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Acetyl-CoA C-acetyltransferase]]
		+	[[Category: Baccr]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Hong J]]	+	[[Category: Hong, J]]
-	[[Category: Kim KJ]]	+	[[Category: Kim, K J]]
		+	[[Category: Acetyl-coa acetyltransferase]]
		+	[[Category: Transferase]]

OCA at 06:22, 7 October 2020

2020-10-07T06:22:56Z

←Older revision		Revision as of 06:22, 7 October 2020
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-	'''Unreleased structure'''

-	~~The entry~~ 7cw5 ~~is ON HOLD until Paper Publication~~	+	==Acetyl-CoA acetyltransferase from Bacillus cereus ATCC 14579==
-		+	<StructureSection load='7cw5' size='340' side='right'caption='[[7cw5]]' scene=''>
-	~~Authors~~: ~~Hong~~, J., ~~Kim~~, K.J.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7CW5 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=7CW5 FirstGlance]. <br>
-	~~Description~~: ~~Acetyl~~-~~CoA acetyltransferase from Bacillus cereus ATCC 14579~~	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=7cw5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7cw5 OCA], [http://pdbe.org/7cw5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=7cw5 RCSB], [http://www.ebi.ac.uk/pdbsum/7cw5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=7cw5 ProSAT]</span></td></tr>
-	[[Category: ~~Unreleased~~ Structures]]	+	</table>
-	[[Category: ~~Kim, K.~~J]]	+	__TOC__
-	[[Category: ~~Hong, J~~]]	+	</StructureSection>
		+	[[Category: Large Structures]]
		+	[[Category: Hong J]]
		+	[[Category: Kim KJ]]

OCA at 08:52, 23 September 2020

2020-09-23T08:52:26Z

←Older revision		Revision as of 08:52, 23 September 2020
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 7cw5 is ON HOLD	+	The entry 7cw5 is ON HOLD until Paper Publication

	Authors: Hong, J., Kim, K.J.		Authors: Hong, J., Kim, K.J.
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	Description: Acetyl-CoA acetyltransferase from Bacillus cereus ATCC 14579		Description: Acetyl-CoA acetyltransferase from Bacillus cereus ATCC 14579
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
-	[[Category: Hong, J]]
	[[Category: Kim, K.J]]		[[Category: Kim, K.J]]
		+	[[Category: Hong, J]]

OCA: Protected "7cw5" [edit=sysop:move=sysop]

2020-09-02T05:17:52Z

Protected "7cw5" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:17, 2 September 2020

OCA: New page: '''Unreleased structure''' The entry 7cw5 is ON HOLD Authors: Hong, J., Kim, K.J. Description: Acetyl-CoA acetyltransferase from Bacillus cereus ATCC 14579 [[Category: Unreleased Struc...

2020-09-02T05:17:51Z

New page: '''Unreleased structure''' The entry 7cw5 is ON HOLD Authors: Hong, J., Kim, K.J. Description: Acetyl-CoA acetyltransferase from Bacillus cereus ATCC 14579 [[Category: Unreleased Struc...

New page

'''Unreleased structure'''

The entry 7cw5 is ON HOLD

Authors: Hong, J., Kim, K.J.

Description: Acetyl-CoA acetyltransferase from Bacillus cereus ATCC 14579
[[Category: Unreleased Structures]]
[[Category: Hong, J]]
[[Category: Kim, K.J]]