7dax - Revision history

OCA at 16:29, 29 November 2023

2023-11-29T16:29:51Z

←Older revision		Revision as of 16:29, 29 November 2023
Line 3:		Line 3:
	<StructureSection load='7dax' size='340' side='right'caption='[[7dax]], [[Resolution\|resolution]] 1.70Å' scene=''>		<StructureSection load='7dax' size='340' side='right'caption='[[7dax]], [[Resolution\|resolution]] 1.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[7dax]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Drome Drome~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DAX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DAX FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[7dax]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DAX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DAX FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>~~, ~~<scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=H1X:2-~~[~~(5-tert-butyl-2-methyl-phenyl)sulfonylamino~~]~~benzoic+acid'>H1X</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.7000097Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max-height: 3em;~~'>~~[[6kel\|6kel]], [[6kem\|6kem]], [[6ken\|6ken]], [[6keq\|6keq]], [[6ker\|6ker]], [[6kep\|6kep]], [[6keo\|6keo]]~~</~~div~~><~~/td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=H1X:2-[(5-tert-butyl-2-methyl-phenyl)sulfonylamino]benzoic+acid'>H1X</scene></td></tr>
-	~~<tr id~~='~~gene'><td class~~=~~"sblockLbl"><b>[[Gene\|Gene~~:~~]]</b~~></~~td><td class="sblockDat"~~>~~GstE14~~, ~~GSTD14-14, nobo, CG4688 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7227 DROME])~~<~~/td></tr>~~	+
-	~~<tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b></td><td class="sblockDat"><span class='plainlinks'>~~[~~https://en.wikipedia.org/wiki/Glutathione_transferase Glutathione transferase], with EC number [https://www.brenda~~-~~enzymes.info/php/result_flat.php4?ecno=~~2~~.5.1.18 2.5.1.18~~] </~~span~~></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dax FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dax OCA], [https://pdbe.org/7dax PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dax RCSB], [https://www.ebi.ac.uk/pdbsum/7dax PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dax ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dax FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dax OCA], [https://pdbe.org/7dax PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dax RCSB], [https://www.ebi.ac.uk/pdbsum/7dax PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dax ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/GSTEE_DROME GSTEE_DROME]] Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles (PubMed:22082028). Essential for ecdysteroid biosynthesis (PubMed:25344753, PubMed:25300303). May be involved in detoxification (PubMed:22082028).<ref>PMID:22082028</ref> <ref>PMID:25300303</ref> <ref>PMID:25344753</ref>	+	[https://www.uniprot.org/uniprot/GSTEE_DROME GSTEE_DROME] Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles (PubMed:22082028). Essential for ecdysteroid biosynthesis (PubMed:25344753, PubMed:25300303). May be involved in detoxification (PubMed:22082028).<ref>PMID:22082028</ref> <ref>PMID:25300303</ref> <ref>PMID:25344753</ref>
		+
		+	==See Also==
		+	*[[Glutathione S-transferase 3D structures\|Glutathione S-transferase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Drome]]
-	[[Category: Glutathione transferase]]
-	[[Category: Large Structures]]
-	[[Category: Inaba, K]]
-	[[Category: Koiwai, K]]
-	[[Category: Niwa, R]]
-	[[Category: Senda, T]]
-	[[Category: Yumoto, F]]
	[[Category: Drosophila melanogaster]]		[[Category: Drosophila melanogaster]]
-	[[Category: ~~Ecdysteroid~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Glutathione s-transferase~~]]	+	[[Category: Inaba K]]
-	[[Category: ~~Gst~~]]	+	[[Category: Koiwai K]]
-	[[Category: ~~Gste14~~]]	+	[[Category: Niwa R]]
-	[[Category: ~~Inhibitor~~]]	+	[[Category: Senda T]]
-	[[Category: ~~Transferase~~]]	+	[[Category: Yumoto F]]

OCA at 10:48, 31 March 2021

2021-03-31T10:48:25Z

←Older revision		Revision as of 10:48, 31 March 2021
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	==Crystal structure of Drosophila melanogaster Noppera-bo, glutathione S-transferase epsilon 14 (DmGSTE14), in TDP013-bound form==		==Crystal structure of Drosophila melanogaster Noppera-bo, glutathione S-transferase epsilon 14 (DmGSTE14), in TDP013-bound form==
-	<StructureSection load='7dax' size='340' side='right'caption='[[7dax]]' scene=''>	+	<StructureSection load='7dax' size='340' side='right'caption='[[7dax]], [[Resolution\|resolution]] 1.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DAX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DAX FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[7dax]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Drome Drome]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DAX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DAX FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dax FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dax OCA], [https://pdbe.org/7dax PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dax RCSB], [https://www.ebi.ac.uk/pdbsum/7dax PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dax ProSAT]</span></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=H1X:2-[(5-tert-butyl-2-methyl-phenyl)sulfonylamino]benzoic+acid'>H1X</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[6kel\|6kel]], [[6kem\|6kem]], [[6ken\|6ken]], [[6keq\|6keq]], [[6ker\|6ker]], [[6kep\|6kep]], [[6keo\|6keo]]</div></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">GstE14, GSTD14-14, nobo, CG4688 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7227 DROME])</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Glutathione_transferase Glutathione transferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.18 2.5.1.18] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dax FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dax OCA], [https://pdbe.org/7dax PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dax RCSB], [https://www.ebi.ac.uk/pdbsum/7dax PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dax ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[https://www.uniprot.org/uniprot/GSTEE_DROME GSTEE_DROME]] Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles (PubMed:22082028). Essential for ecdysteroid biosynthesis (PubMed:25344753, PubMed:25300303). May be involved in detoxification (PubMed:22082028).<ref>PMID:22082028</ref> <ref>PMID:25300303</ref> <ref>PMID:25344753</ref>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Drome]]
		+	[[Category: Glutathione transferase]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Inaba K]]	+	[[Category: Inaba, K]]
-	[[Category: Koiwai K]]	+	[[Category: Koiwai, K]]
-	[[Category: Niwa R]]	+	[[Category: Niwa, R]]
-	[[Category: Senda T]]	+	[[Category: Senda, T]]
-	[[Category: Yumoto F]]	+	[[Category: Yumoto, F]]
		+	[[Category: Drosophila melanogaster]]
		+	[[Category: Ecdysteroid]]
		+	[[Category: Glutathione s-transferase]]
		+	[[Category: Gst]]
		+	[[Category: Gste14]]
		+	[[Category: Inhibitor]]
		+	[[Category: Transferase]]

OCA at 11:02, 10 February 2021

2021-02-10T11:02:11Z

←Older revision		Revision as of 11:02, 10 February 2021
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry 7dax is ON HOLD until Paper Publication~~	+	==Crystal structure of Drosophila melanogaster Noppera-bo, glutathione S-transferase epsilon 14 (DmGSTE14), in TDP013-bound form==
-		+	<StructureSection load='7dax' size='340' side='right'caption='[[7dax]]' scene=''>
-	~~Authors: Koiwai, K., Inaba, K., Yumoto, F., Senda, T., Niwa, R.~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DAX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DAX FirstGlance]. <br>
-	~~Description:~~ Crystal structure of Drosophila melanogaster Noppera-bo, glutathione S-transferase epsilon 14 (DmGSTE14), in TDP013-bound form	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dax FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dax OCA], [https://pdbe.org/7dax PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dax RCSB], [https://www.ebi.ac.uk/pdbsum/7dax PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dax ProSAT]</span></td></tr>
-	[[~~Category~~: ~~Unreleased Structures~~]]	+	</table>
-	[[~~Category~~: ~~Niwa~~, R]]	+	__TOC__
-	[[Category: ~~Senda, T~~]]	+	</StructureSection>
-	[[Category: Inaba, K]]	+	[[Category: Large Structures]]
-	[[Category: ~~Yumoto, F~~]]	+	[[Category: Inaba K]]
-	[[Category: ~~Koiwai, K~~]]	+	[[Category: Koiwai K]]
		+	[[Category: Niwa R]]
		+	[[Category: Senda T]]
		+	[[Category: Yumoto F]]

OCA at 05:28, 4 November 2020

2020-11-04T05:28:14Z

←Older revision		Revision as of 05:28, 4 November 2020
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 7dax is ON HOLD	+	The entry 7dax is ON HOLD until Paper Publication

	Authors: Koiwai, K., Inaba, K., Yumoto, F., Senda, T., Niwa, R.		Authors: Koiwai, K., Inaba, K., Yumoto, F., Senda, T., Niwa, R.

OCA: Protected "7dax" [edit=sysop:move=sysop]

2020-10-28T19:02:49Z

Protected "7dax" [edit=sysop:move=sysop]

←Older revision

Revision as of 19:02, 28 October 2020

OCA: New page: '''Unreleased structure''' The entry 7dax is ON HOLD Authors: Koiwai, K., Inaba, K., Yumoto, F., Senda, T., Niwa, R. Description: Crystal structure of Drosophila melanogaster Noppera-b...

2020-10-28T19:02:48Z

New page: '''Unreleased structure''' The entry 7dax is ON HOLD Authors: Koiwai, K., Inaba, K., Yumoto, F., Senda, T., Niwa, R. Description: Crystal structure of Drosophila melanogaster Noppera-b...

New page

'''Unreleased structure'''

The entry 7dax is ON HOLD

Authors: Koiwai, K., Inaba, K., Yumoto, F., Senda, T., Niwa, R.

Description: Crystal structure of Drosophila melanogaster Noppera-bo, glutathione S-transferase epsilon 14 (DmGSTE14), in TDP013-bound form
[[Category: Unreleased Structures]]
[[Category: Niwa, R]]
[[Category: Senda, T]]
[[Category: Inaba, K]]
[[Category: Yumoto, F]]
[[Category: Koiwai, K]]