OCA at 16:39, 29 November 2023

2023-11-29T16:39:22Z

←Older revision		Revision as of 16:39, 29 November 2023
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	==Crystal structure of the RecA2 domain of RNA helicase CGH-1 in C. elegans==		==Crystal structure of the RecA2 domain of RNA helicase CGH-1 in C. elegans==
-	<StructureSection load='7dtj' size='340' side='right'caption='[[7dtj]]' scene=''>	+	<StructureSection load='7dtj' size='340' side='right'caption='[[7dtj]], [[Resolution\|resolution]] 2.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DTJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DTJ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[7dtj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DTJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DTJ FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dtj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dtj OCA], [https://pdbe.org/7dtj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dtj RCSB], [https://www.ebi.ac.uk/pdbsum/7dtj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dtj ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.402Å</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dtj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dtj OCA], [https://pdbe.org/7dtj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dtj RCSB], [https://www.ebi.ac.uk/pdbsum/7dtj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dtj ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/CGH1_CAEEL CGH1_CAEEL] Probable RNA helicase required for oocyte and sperm function. Also required to prevent the physiological germline apoptosis mechanism killing essentially all developing oocytes.<ref>PMID:11546739</ref> <ref>PMID:16221731</ref>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	A protein-RNA complex containing the RNA helicase CGH-1 and a germline specific RNA-binding protein CAR-1 is involved in various aspects of function in C. elegans. However, the structural basis for the assembly of this protein complex remains unclear. Here, we elucidate the molecular basis of the recognition of CGH-1 by CAR-1. Additionally, we found that the ATPase activity of CGH-1 is stimulated by NTL-1a MIF4G domain in vitro. Furthermore, we determined the structures of the two RecA-like domains of CGH-1 by X-ray crystallography at resolutions of 1.85 and 2.40 A, respectively. Structural and biochemical approaches revealed a bipartite interface between CGH-1 RecA2 and the FDF-TFG motif of CAR-1. NMR and structure-based mutations in CGH-1 RecA2 or CAR-1 attenuated or disrupted CGH-1 binding to CAR-1, assessed by ITC and GST-pulldown in vitro. These findings provide insights into a conserved mechanism in the recognition of CGH-1 by CAR-1. Together, our data provide the missing physical links in understanding the assembly and function of CGH-1 and CAR-1 in C. elegans.
		+
		+	Structural and biochemical insights into the recognition of RNA helicase CGH-1 by CAR-1 in C. elegans.,Zhang Y, Lv M, Li F, Li M, Zhang J, Shi Y, Hong J Biochem Biophys Res Commun. 2021 Mar 3;549:135-142. doi:, 10.1016/j.bbrc.2021.02.119. PMID:33676181<ref>PMID:33676181</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 7dtj" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Caenorhabditis elegans]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Hong JJ]]		[[Category: Hong JJ]]
	[[Category: Lv MQ]]		[[Category: Lv MQ]]
	[[Category: Zhang Y]]		[[Category: Zhang Y]]

OCA: Protected "7dtj" [edit=sysop:move=sysop]

2021-03-17T06:47:24Z

Protected "7dtj" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:47, 17 March 2021

OCA: New page: ==Crystal structure of the RecA2 domain of RNA helicase CGH-1 in C. elegans== == Structural highlights ==...

2021-03-17T06:47:22Z

New page: ==Crystal structure of the RecA2 domain of RNA helicase CGH-1 in C. elegans== <StructureSection load='7dtj' size='340' side='right'caption='7dtj' scene=''> == Structural highlights ==...

New page

==Crystal structure of the RecA2 domain of RNA helicase CGH-1 in C. elegans==
<StructureSection load='7dtj' size='340' side='right'caption='[[7dtj]]' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DTJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DTJ FirstGlance]. <br>
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dtj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dtj OCA], [https://pdbe.org/7dtj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dtj RCSB], [https://www.ebi.ac.uk/pdbsum/7dtj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dtj ProSAT]</span></td></tr>
</table>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Hong JJ]]
[[Category: Lv MQ]]
[[Category: Zhang Y]]

7dtj - Revision history

OCA at 16:39, 29 November 2023

OCA: Protected "7dtj" [edit=sysop:move=sysop]

OCA: New page: ==Crystal structure of the RecA2 domain of RNA helicase CGH-1 in C. elegans== == Structural highlights ==...