OCA at 15:19, 18 October 2023

2023-10-18T15:19:21Z

←Older revision		Revision as of 15:19, 18 October 2023
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-	====	+	==Crystal structure of BoNT/E LC-HN domain in complex with VHH JLE-E9==
-	<StructureSection load='7k7y' size='340' side='right'caption='[[7k7y]]' scene=''>	+	<StructureSection load='7k7y' size='340' side='right'caption='[[7k7y]], [[Resolution\|resolution]] 3.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[7k7y]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_botulinum Clostridium botulinum] and [https://en.wikipedia.org/wiki/Vicugna_pacos Vicugna pacos]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7K7Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7K7Y FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=7k7y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7k7y OCA], [~~http~~://pdbe.org/7k7y PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=7k7y RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/7k7y PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=7k7y ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 3.6Å</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7k7y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7k7y OCA], [https://pdbe.org/7k7y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7k7y RCSB], [https://www.ebi.ac.uk/pdbsum/7k7y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7k7y ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/BXE_CLOBO BXE_CLOBO] Botulinum toxin acts by inhibiting neurotransmitter release. It binds to peripheral neuronal synapses, is internalized and moves by retrograde transport up the axon into the spinal cord where it can move between postsynaptic and presynaptic neurons. It inhibits neurotransmitter release by acting as a zinc endopeptidase that catalyzes the hydrolysis of the 180-Arg-\|-Ile-181 bond in SNAP-25.
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Botulinum neurotoxin serotype E (BoNT/E) is one of the major causes of human botulism, which is a life-threatening disease caused by flaccid paralysis of muscles. After receptor-mediated toxin internalization into motor neurons, the translocation domain (HN) of BoNT/E transforms into a protein channel upon vesicle acidification in endosomes and delivers its protease domain (LC) across membrane to enter the neuronal cytosol. It is believed that the rapid onset of BoNT/E intoxication compared to other BoNT serotypes is related to its swift internalization and translocation. We recently identified two neutralizing single-domain camelid antibodies (VHHs) against BoNT/E1 termed JLE-E5 and JLE-E9. Here, we report the crystal structures of these two VHHs bound to the LCHN domain of BoNT/E1. The structures reveal that these VHHs recognize two distinct epitopes that are partially overlapping with the putative transmembrane regions on HN, and therefore could physically block membrane association of BoNT/E1. This is confirmed by our in vitro studies, which show that these VHHs inhibit the structural change of BoNT/E1 at acidic pH and interfere with BoNT/E1 association with lipid vesicles. Therefore, these two VHHs neutralize BoNT/E1 by preventing the transmembrane delivery of LC. Furthermore, structure-based sequence analyses show that the 3-dimensional epitopes of these two VHHs are largely conserved across many BoNT/E subtypes, suggesting a broad-spectrum protection against the BoNT/E family. In summary, this work improves our understanding of the membrane translocation mechanism of BoNT/E and paves the way for developing VHHs as diagnostics or therapeutics for the treatment of BoNT/E intoxication.
		+
		+	Two VHH Antibodies Neutralize Botulinum Neurotoxin E1 by Blocking Its Membrane Translocation in Host Cells.,Lam KH, Perry K, Shoemaker CB, Jin R Toxins (Basel). 2020 Sep 27;12(10). pii: toxins12100616. doi:, 10.3390/toxins12100616. PMID:32992561<ref>PMID:32992561</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 7k7y" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Antibody 3D structures\|Antibody 3D structures]]
		+	*[[Botulinum neurotoxin 3D structures\|Botulinum neurotoxin 3D structures]]
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Clostridium botulinum]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Z-disk~~]]	+	[[Category: Vicugna pacos]]
		+	[[Category: Jin R]]
		+	[[Category: Lam K]]

OCA at 05:53, 14 October 2020

2020-10-14T05:53:18Z

←Older revision		Revision as of 05:53, 14 October 2020
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 7k7y ~~is ON HOLD until Paper Publication~~	+	====
-		+	<StructureSection load='7k7y' size='340' side='right'caption='[[7k7y]]' scene=''>
-	~~Authors~~: ~~Lam, K~~.~~, Jin, R~~.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>
-	~~Description~~: ~~Crystal structure of BoNT~~/~~E LC~~-~~HN domain in complex with VHH JLE-E9~~	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=7k7y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7k7y OCA], [http://pdbe.org/7k7y PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=7k7y RCSB], [http://www.ebi.ac.uk/pdbsum/7k7y PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=7k7y ProSAT]</span></td></tr>
-	[[~~Category~~: ~~Unreleased Structures~~]]	+	</table>
-	[[Category: ~~Jin, R~~]]	+	__TOC__
-	[[Category: ~~Lam, K~~]]	+	</StructureSection>
		+	[[Category: Large Structures]]
		+	[[Category: Z-disk]]

OCA: Protected "7k7y" [edit=sysop:move=sysop]

2020-10-07T04:44:46Z

Protected "7k7y" [edit=sysop:move=sysop]

←Older revision

Revision as of 04:44, 7 October 2020

OCA: New page: '''Unreleased structure''' The entry 7k7y is ON HOLD until Paper Publication Authors: Lam, K., Jin, R. Description: Crystal structure of BoNT/E LC-HN domain in complex with VHH JLE-E9 ...

2020-10-07T04:44:45Z

New page: '''Unreleased structure''' The entry 7k7y is ON HOLD until Paper Publication Authors: Lam, K., Jin, R. Description: Crystal structure of BoNT/E LC-HN domain in complex with VHH JLE-E9 ...

New page

'''Unreleased structure'''

The entry 7k7y is ON HOLD until Paper Publication

Authors: Lam, K., Jin, R.

Description: Crystal structure of BoNT/E LC-HN domain in complex with VHH JLE-E9
[[Category: Unreleased Structures]]
[[Category: Jin, R]]
[[Category: Lam, K]]

7k7y - Revision history

OCA at 15:19, 18 October 2023

OCA at 05:53, 14 October 2020

OCA: Protected "7k7y" [edit=sysop:move=sysop]

OCA: New page: '''Unreleased structure''' The entry 7k7y is ON HOLD until Paper Publication Authors: Lam, K., Jin, R. Description: Crystal structure of BoNT/E LC-HN domain in complex with VHH JLE-E9 ...