7p2e - Revision history

OCA at 11:04, 15 November 2023

2023-11-15T11:04:39Z

←Older revision		Revision as of 11:04, 15 November 2023
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[7p2e]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7P2E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7P2E FirstGlance]. <br>		<table><tr><td colspan='2'>[[7p2e]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7P2E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7P2E FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5F0:(3~{S})-3-azanyl-4-methoxy-4-oxidanylidene-butanoic+acid'>5F0</scene>, <scene name='pdbligand=5I0:[(2~{S},3~{S},4~{S},5~{R},6~{S})-2-[(2~{R},3~{R},4~{R},5~{S})-2-[(1~{R},2~{S},3~{R},4~{R},5~{S},6~{R})-2,4-bis[[azaniumylidene(azanyl)methyl]amino]-3,5,6-tris(oxidanyl)cyclohexyl]oxy-4-[bis(oxidanyl)methyl]-5-methyl-4-oxidanyl-oxolan-3-yl]oxy-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-yl]-methyl-azanium'>5I0</scene>, <scene name='pdbligand=5MC:5-METHYLCYTIDINE-5-MONOPHOSPHATE'>5MC</scene>, <scene name='pdbligand=5MU:5-METHYLURIDINE+5-MONOPHOSPHATE'>5MU</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=AYA:N-ACETYLALANINE'>AYA</scene>, <scene name='pdbligand=B8T:4-methyl,+cytidine-5-monophosphate'>B8T</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=GNP:PHOSPHOAMINOPHOSPHONIC+ACID-GUANYLATE+ESTER'>GNP</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MA6:6N-DIMETHYLADENOSINE-5-MONOPHOSHATE'>MA6</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=SPM:SPERMINE'>SPM</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution\|Resolution]] 2.4Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5F0:(3~{S})-3-azanyl-4-methoxy-4-oxidanylidene-butanoic+acid'>5F0</scene>, <scene name='pdbligand=5I0:[(2~{S},3~{S},4~{S},5~{R},6~{S})-2-[(2~{R},3~{R},4~{R},5~{S})-2-[(1~{R},2~{S},3~{R},4~{R},5~{S},6~{R})-2,4-bis[[azaniumylidene(azanyl)methyl]amino]-3,5,6-tris(oxidanyl)cyclohexyl]oxy-4-[bis(oxidanyl)methyl]-5-methyl-4-oxidanyl-oxolan-3-yl]oxy-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-yl]-methyl-azanium'>5I0</scene>, <scene name='pdbligand=5MC:5-METHYLCYTIDINE-5-MONOPHOSPHATE'>5MC</scene>, <scene name='pdbligand=5MU:5-METHYLURIDINE+5-MONOPHOSPHATE'>5MU</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=AYA:N-ACETYLALANINE'>AYA</scene>, <scene name='pdbligand=B8T:4-methyl,+cytidine-5-monophosphate'>B8T</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=GNP:PHOSPHOAMINOPHOSPHONIC+ACID-GUANYLATE+ESTER'>GNP</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MA6:6N-DIMETHYLADENOSINE-5-MONOPHOSHATE'>MA6</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=SPM:SPERMINE'>SPM</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7p2e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7p2e OCA], [https://pdbe.org/7p2e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7p2e RCSB], [https://www.ebi.ac.uk/pdbsum/7p2e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7p2e ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7p2e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7p2e OCA], [https://pdbe.org/7p2e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7p2e RCSB], [https://www.ebi.ac.uk/pdbsum/7p2e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7p2e ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[https://www.uniprot.org/uniprot/RT02_HUMAN RT02_HUMAN]		[https://www.uniprot.org/uniprot/RT02_HUMAN RT02_HUMAN]
		+
		+	==See Also==
		+	*[[Ribosome 3D structures\|Ribosome 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 11:00, 30 November 2022

2022-11-30T11:00:52Z

←Older revision		Revision as of 11:00, 30 November 2022
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	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/RT02_HUMAN RT02_HUMAN]]	+	[https://www.uniprot.org/uniprot/RT02_HUMAN RT02_HUMAN]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 04:08, 8 September 2022

2022-09-08T04:08:44Z

←Older revision		Revision as of 04:08, 8 September 2022
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-	====	+	==Human mitochondrial ribosome small subunit in complex with IF3, GMPPMP and streptomycin==
-	<StructureSection load='7p2e' size='340' side='right'caption='[[7p2e]]' scene=''>	+	<StructureSection load='7p2e' size='340' side='right'caption='[[7p2e]], [[Resolution\|resolution]] 2.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[7p2e]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7P2E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7P2E FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7p2e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7p2e OCA], [https://pdbe.org/7p2e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7p2e RCSB], [https://www.ebi.ac.uk/pdbsum/7p2e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7p2e ProSAT]</span></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5F0:(3~{S})-3-azanyl-4-methoxy-4-oxidanylidene-butanoic+acid'>5F0</scene>, <scene name='pdbligand=5I0:[(2~{S},3~{S},4~{S},5~{R},6~{S})-2-[(2~{R},3~{R},4~{R},5~{S})-2-[(1~{R},2~{S},3~{R},4~{R},5~{S},6~{R})-2,4-bis[[azaniumylidene(azanyl)methyl]amino]-3,5,6-tris(oxidanyl)cyclohexyl]oxy-4-[bis(oxidanyl)methyl]-5-methyl-4-oxidanyl-oxolan-3-yl]oxy-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-yl]-methyl-azanium'>5I0</scene>, <scene name='pdbligand=5MC:5-METHYLCYTIDINE-5-MONOPHOSPHATE'>5MC</scene>, <scene name='pdbligand=5MU:5-METHYLURIDINE+5-MONOPHOSPHATE'>5MU</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=AYA:N-ACETYLALANINE'>AYA</scene>, <scene name='pdbligand=B8T:4-methyl,+cytidine-5-monophosphate'>B8T</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=GNP:PHOSPHOAMINOPHOSPHONIC+ACID-GUANYLATE+ESTER'>GNP</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MA6:6N-DIMETHYLADENOSINE-5-MONOPHOSHATE'>MA6</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=SPM:SPERMINE'>SPM</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7p2e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7p2e OCA], [https://pdbe.org/7p2e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7p2e RCSB], [https://www.ebi.ac.uk/pdbsum/7p2e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7p2e ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[https://www.uniprot.org/uniprot/RT02_HUMAN RT02_HUMAN]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Homo sapiens]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Z-disk~~]]	+	[[Category: Amunts A]]
		+	[[Category: Itoh Y]]
		+	[[Category: Khawaja A]]
		+	[[Category: Rorbach J]]

OCA at 18:00, 27 July 2022

2022-07-27T18:00:54Z

←Older revision		Revision as of 18:00, 27 July 2022
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-	'''Unreleased structure'''

-	~~The entry~~ 7p2e is ~~ON HOLD until 2023~~-07-05	+	====
-		+	<StructureSection load='7p2e' size='340' side='right'caption='[[7p2e]]' scene=''>
-	~~Authors:~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>
-	~~Description~~:	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7p2e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7p2e OCA], [https://pdbe.org/7p2e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7p2e RCSB], [https://www.ebi.ac.uk/pdbsum/7p2e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7p2e ProSAT]</span></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Large Structures]]
		+	[[Category: Z-disk]]

OCA at 03:43, 20 July 2022

2022-07-20T03:43:55Z

←Older revision		Revision as of 03:43, 20 July 2022
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 7p2e is ON HOLD	+	The entry 7p2e is ON HOLD until 2023-07-05

	Authors:		Authors:

OCA at 03:48, 8 June 2022

2022-06-08T03:48:21Z

←Older revision		Revision as of 03:48, 8 June 2022
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 7p2e is ON HOLD ~~until Jul 05 2023~~	+	The entry 7p2e is ON HOLD

	Authors:		Authors:

OCA at 05:08, 25 August 2021

2021-08-25T05:08:20Z

←Older revision		Revision as of 05:08, 25 August 2021
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 7p2e is ON HOLD	+	The entry 7p2e is ON HOLD until Jul 05 2023

	Authors:		Authors:

OCA at 09:28, 28 July 2021

2021-07-28T09:28:10Z

←Older revision		Revision as of 09:28, 28 July 2021
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 7p2e is ON HOLD ~~until sometime in the future~~	+	The entry 7p2e is ON HOLD

	Authors:		Authors:

OCA: Protected "7p2e" [edit=sysop:move=sysop]

2021-07-14T08:51:32Z

Protected "7p2e" [edit=sysop:move=sysop]

←Older revision

Revision as of 08:51, 14 July 2021

OCA: New page: '''Unreleased structure''' The entry 7p2e is ON HOLD until sometime in the future Authors: Description: Category: Unreleased Structures

2021-07-14T08:51:31Z

New page: '''Unreleased structure''' The entry 7p2e is ON HOLD until sometime in the future Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 7p2e is ON HOLD until sometime in the future

Authors:

Description:
[[Category: Unreleased Structures]]