7z4b - Revision history

OCA at 09:00, 28 December 2022

2022-12-28T09:00:39Z

←Older revision		Revision as of 09:00, 28 December 2022
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 7z4b is ~~ON HOLD~~	+	==Bacteriophage SU10 virion (C1)==
		+	<StructureSection load='7z4b' size='340' side='right'caption='[[7z4b]], [[Resolution\|resolution]] 7.40Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[7z4b]] is a 109 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_phage_vB_EcoP_SU10 Escherichia phage vB_EcoP_SU10]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7Z4B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7Z4B FirstGlance]. <br>
		+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7z4b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7z4b OCA], [https://pdbe.org/7z4b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7z4b RCSB], [https://www.ebi.ac.uk/pdbsum/7z4b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7z4b ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A0A0B4N1Q7_9CAUD A0A0B4N1Q7_9CAUD]
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Escherichia coli phage SU10 belongs to the genus Kuravirus from the class Caudoviricetes of phages with short non-contractile tails. In contrast to other short-tailed phages, the tails of Kuraviruses elongate upon cell attachment. Here we show that the virion of SU10 has a prolate head, containing genome and ejection proteins, and a tail, which is formed of portal, adaptor, nozzle, and tail needle proteins and decorated with long and short fibers. The binding of the long tail fibers to the receptors in the outer bacterial membrane induces the straightening of nozzle proteins and rotation of short tail fibers. After the re-arrangement, the nozzle proteins and short tail fibers alternate to form a nozzle that extends the tail by 28 nm. Subsequently, the tail needle detaches from the nozzle proteins and five types of ejection proteins are released from the SU10 head. The nozzle with the putative extension formed by the ejection proteins enables the delivery of the SU10 genome into the bacterial cytoplasm. It is likely that this mechanism of genome delivery, involving the formation of the tail nozzle, is employed by all Kuraviruses.

-	~~Authors: Siborova~~, M., Fuzik, T., Prochazkova, M., Novacek, J., ~~Plevka~~, P.	+	Tail proteins of phage SU10 reorganize into the nozzle for genome delivery.,Siborova M, Fuzik T, Prochazkova M, Novacek J, Benesik M, Nilsson AS, Plevka P Nat Commun. 2022 Sep 24;13(1):5622. doi: 10.1038/s41467-022-33305-w. PMID:36153309<ref>PMID:36153309</ref>

-	~~Description~~: ~~Bacteriophage SU10 virion (C1)~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	[[Category: ~~Unreleased~~ Structures]]	+	</div>
-	[[Category: ~~Plevka, P~~]]	+	<div class="pdbe-citations 7z4b" style="background-color:#fffaf0;"></div>
-	[[Category: ~~Siborova, M~~]]	+	== References ==
-	[[Category: ~~Prochazkova, M~~]]	+	<references/>
-	[[Category: ~~Novacek, J~~]]	+	__TOC__
-	[[Category: ~~Fuzik, T~~]]	+	</StructureSection>
		+	[[Category: Escherichia phage vB_EcoP_SU10]]
		+	[[Category: Large Structures]]
		+	[[Category: Fuzik T]]
		+	[[Category: Novacek J]]
		+	[[Category: Plevka P]]
		+	[[Category: Prochazkova M]]
		+	[[Category: Siborova M]]

OCA at 07:42, 24 November 2022

2022-11-24T07:42:33Z

←Older revision		Revision as of 07:42, 24 November 2022
Line 8:		Line 8:
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
	[[Category: Plevka, P]]		[[Category: Plevka, P]]
		+	[[Category: Siborova, M]]
	[[Category: Prochazkova, M]]		[[Category: Prochazkova, M]]
	[[Category: Novacek, J]]		[[Category: Novacek, J]]
-	[[Category: Siborova, M]]
	[[Category: Fuzik, T]]		[[Category: Fuzik, T]]

OCA at 08:44, 13 April 2022

2022-04-13T08:44:55Z

←Older revision		Revision as of 08:44, 13 April 2022
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 7z4b is ON HOLD ~~until sometime in the future~~	+	The entry 7z4b is ON HOLD

	Authors: Siborova, M., Fuzik, T., Prochazkova, M., Novacek, J., Plevka, P.		Authors: Siborova, M., Fuzik, T., Prochazkova, M., Novacek, J., Plevka, P.
Line 7:		Line 7:
	Description: Bacteriophage SU10 virion (C1)		Description: Bacteriophage SU10 virion (C1)
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
-	[[Category: Prochazkova, M]]
-	[[Category: Fuzik, T]]
	[[Category: Plevka, P]]		[[Category: Plevka, P]]
		+	[[Category: Prochazkova, M]]
	[[Category: Novacek, J]]		[[Category: Novacek, J]]
	[[Category: Siborova, M]]		[[Category: Siborova, M]]
		+	[[Category: Fuzik, T]]

OCA at 10:06, 23 March 2022

2022-03-23T10:06:52Z

←Older revision		Revision as of 10:06, 23 March 2022
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 7z4b is ON HOLD	+	The entry 7z4b is ON HOLD until sometime in the future

	Authors: Siborova, M., Fuzik, T., Prochazkova, M., Novacek, J., Plevka, P.		Authors: Siborova, M., Fuzik, T., Prochazkova, M., Novacek, J., Plevka, P.

OCA: Protected "7z4b" [edit=sysop:move=sysop]

2022-03-09T05:13:32Z

Protected "7z4b" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:13, 9 March 2022

OCA: New page: '''Unreleased structure''' The entry 7z4b is ON HOLD Authors: Siborova, M., Fuzik, T., Prochazkova, M., Novacek, J., Plevka, P. Description: Bacteriophage SU10 virion (C1) [[Category: ...

2022-03-09T05:13:32Z

New page: '''Unreleased structure''' The entry 7z4b is ON HOLD Authors: Siborova, M., Fuzik, T., Prochazkova, M., Novacek, J., Plevka, P. Description: Bacteriophage SU10 virion (C1) [[Category: ...

New page

'''Unreleased structure'''

The entry 7z4b is ON HOLD

Authors: Siborova, M., Fuzik, T., Prochazkova, M., Novacek, J., Plevka, P.

Description: Bacteriophage SU10 virion (C1)
[[Category: Unreleased Structures]]
[[Category: Prochazkova, M]]
[[Category: Fuzik, T]]
[[Category: Plevka, P]]
[[Category: Novacek, J]]
[[Category: Siborova, M]]