OCA at 11:37, 13 December 2023

2023-12-13T11:37:13Z

←Older revision		Revision as of 11:37, 13 December 2023
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-	'''Unreleased structure'''

-	~~The entry~~ 8ahy is ~~ON HOLD until Paper~~ Publication	+	==X-ray structure of human NCS-1 bound to Ric-8A==
		+	<StructureSection load='8ahy' size='340' side='right'caption='[[8ahy]], [[Resolution\|resolution]] 1.70Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[8ahy]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8AHY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8AHY FirstGlance]. <br>
		+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.7Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8ahy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8ahy OCA], [https://pdbe.org/8ahy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8ahy RCSB], [https://www.ebi.ac.uk/pdbsum/8ahy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8ahy ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/NCS1_HUMAN NCS1_HUMAN] Neuronal calcium sensor, regulator of G protein-coupled receptor phosphorylation in a calcium dependent manner. Directly regulates GRK1 (RHOK), but not GRK2 to GRK5. Can substitute for calmodulin (By similarity). Stimulates PI4KB kinase activity (By similarity). Involved in long-term synaptic plasticity through its interaction with PICK1 (By similarity). May also play a role in neuron differentiation through inhibition of the activity of N-type voltage-gated calcium channel (By similarity).
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The Neuronal Calcium Sensor 1, an EF-hand Ca(2+) binding protein, and Ric-8A coregulate synapse number and probability of neurotransmitter release. Recently, the structures of Ric-8A bound to Ga have revealed how Ric-8A phosphorylation promotes Ga recognition and activity as a chaperone and guanine nucleotide exchange factor. However, the molecular mechanism by which NCS-1 regulates Ric-8A activity and its interaction with Ga subunits is not well understood. Given the interest in the NCS-1/Ric-8A complex as a therapeutic target in nervous system disorders, it is necessary to shed light on this molecular mechanism of action at atomic level. We have reconstituted NCS-1/Ric-8A complexes to conduct a multimodal approach and determine the sequence of Ca(2+) signals and phosphorylation events that promote the interaction of Ric-8A with Ga. Our data show that the binding of NCS-1 and Ga to Ric-8A are mutually exclusive. Importantly, NCS-1 induces a structural rearrangement in Ric-8A that traps the protein in a conformational state that is inaccessible to Casein Kinase II-mediated phosphorylation, demonstrating one aspect of its negative regulation of Ric-8A-mediated G-protein signaling. Functional experiments indicate a loss of Ric-8A GEF activity towards Ga when complexed with NCS-1, and restoration of nucleotide exchange activity upon increasing Ca(2+) concentration. Finally, the high-resolution crystallographic data reported here define the NCS-1/Ric-8A interface and will allow the development of therapeutic synapse function regulators with improved activity and selectivity.

-	~~Authors~~:	+	The neuronal calcium sensor NCS-1 regulates the phosphorylation state and activity of the Ga chaperone and GEF Ric-8A.,Munoz-Reyes D, McClelland LJ, Arroyo-Urea S, Sanchez-Yepes S, Sabin J, Perez-Suarez S, Menendez M, Mansilla A, Garcia-Nafria J, Sprang S, Sanchez-Barrena MJ Elife. 2023 Nov 29;12:e86151. doi: 10.7554/eLife.86151. PMID:38018500<ref>PMID:38018500</ref>

-	~~Description~~:	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	[[Category: ~~Unreleased~~ Structures]]	+	</div>
		+	<div class="pdbe-citations 8ahy" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Homo sapiens]]
		+	[[Category: Large Structures]]
		+	[[Category: Rattus norvegicus]]
		+	[[Category: Munoz-Reyes D]]
		+	[[Category: Sanchez-Barrena MJ]]

OCA: Protected "8ahy" [edit=sysop:move=sysop]

2022-08-03T03:48:07Z

Protected "8ahy" [edit=sysop:move=sysop]

←Older revision

Revision as of 03:48, 3 August 2022

OCA: New page: '''Unreleased structure''' The entry 8ahy is ON HOLD until Paper Publication Authors: Description: Category: Unreleased Structures

2022-08-03T03:48:06Z

New page: '''Unreleased structure''' The entry 8ahy is ON HOLD until Paper Publication Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 8ahy is ON HOLD until Paper Publication

Authors:

Description:
[[Category: Unreleased Structures]]

8ahy - Revision history

OCA at 11:37, 13 December 2023

OCA: Protected "8ahy" [edit=sysop:move=sysop]

OCA: New page: '''Unreleased structure''' The entry 8ahy is ON HOLD until Paper Publication Authors: Description: Category: Unreleased Structures