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8edd - Revision history
2026-04-03T20:54:16Z
Revision history for this page on the wiki
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OCA at 06:20, 6 September 2023
2023-09-06T06:20:15Z
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<td colspan='2' style="background-color: white; color:black;">←Older revision</td>
<td colspan='2' style="background-color: white; color:black;">Revision as of 06:20, 6 September 2023</td>
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<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>'''Unreleased structure'''</div></td><td colspan="2"> </td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del style="color: red; font-weight: bold; text-decoration: none;">The entry </del>8edd <del style="color: red; font-weight: bold; text-decoration: none;">is ON HOLD until Paper Publication</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">==Staphylococcus aureus endonuclease IV Y33F mutant==</ins></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"><StructureSection load='</ins>8edd<ins style="color: red; font-weight: bold; text-decoration: none;">' size='340' side='right'caption='[[8edd]], [[Resolution|resolution]] 1.50&Aring;' scene=''></ins></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del style="color: red; font-weight: bold; text-decoration: none;">Authors</del>: <del style="color: red; font-weight: bold; text-decoration: none;">Saper, M</del>.<del style="color: red; font-weight: bold; text-decoration: none;">A</del>., <del style="color: red; font-weight: bold; text-decoration: none;">Kirillov, S</del>., <del style="color: red; font-weight: bold; text-decoration: none;">Isupov</del>, <del style="color: red; font-weight: bold; text-decoration: none;">M</del>.<del style="color: red; font-weight: bold; text-decoration: none;">N</del>., <del style="color: red; font-weight: bold; text-decoration: none;">Wiener</del>, <del style="color: red; font-weight: bold; text-decoration: none;">R</del>., <del style="color: red; font-weight: bold; text-decoration: none;">Rouvinski</del>, <del style="color: red; font-weight: bold; text-decoration: none;">A</del>.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">== Structural highlights ==</ins></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"><table><tr><td colspan='2'>[[8edd]] is a 1 chain structure with sequence from [https</ins>:<ins style="color: red; font-weight: bold; text-decoration: none;">//en</ins>.<ins style="color: red; font-weight: bold; text-decoration: none;">wikipedia</ins>.<ins style="color: red; font-weight: bold; text-decoration: none;">org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8EDD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8EDD FirstGlance]. <br></ins></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del style="color: red; font-weight: bold; text-decoration: none;">Description</del>: <del style="color: red; font-weight: bold; text-decoration: none;">Staphylococcus aureus endonuclease </del>IV <del style="color: red; font-weight: bold; text-decoration: none;">Y33F mutant</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"></td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction</ins>, <ins style="color: red; font-weight: bold; text-decoration: none;">[[Resolution|Resolution]] 1</ins>.<ins style="color: red; font-weight: bold; text-decoration: none;">5&#8491;</td></tr></ins></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[Category: <del style="color: red; font-weight: bold; text-decoration: none;">Unreleased </del>Structures]]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></ins>, <ins style="color: red; font-weight: bold; text-decoration: none;"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></ins>, <ins style="color: red; font-weight: bold; text-decoration: none;"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr></ins></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[Category: <del style="color: red; font-weight: bold; text-decoration: none;">Rouvinski, A</del>]]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia</ins>.<ins style="color: red; font-weight: bold; text-decoration: none;">org/fgij/fg</ins>.<ins style="color: red; font-weight: bold; text-decoration: none;">htm?mol=8edd FirstGlance]</ins>, <ins style="color: red; font-weight: bold; text-decoration: none;">[http://oca.weizmann.ac.il/oca-bin/ocaids?id=8edd OCA]</ins>, <ins style="color: red; font-weight: bold; text-decoration: none;">[https://pdbe</ins>.<ins style="color: red; font-weight: bold; text-decoration: none;">org/8edd PDBe]</ins>, <ins style="color: red; font-weight: bold; text-decoration: none;">[https://www.rcsb.org/pdb/explore.do?structureId=8edd RCSB]</ins>, <ins style="color: red; font-weight: bold; text-decoration: none;">[https://www</ins>.<ins style="color: red; font-weight: bold; text-decoration: none;">ebi.ac.uk/pdbsum/8edd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8edd ProSAT]</span></td></tr></ins></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[Category: <del style="color: red; font-weight: bold; text-decoration: none;">Saper, M.A</del>]]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"></table></ins></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[Category: Kirillov<del style="color: red; font-weight: bold; text-decoration: none;">, </del>S]]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">== Function ==</ins></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[Category: <del style="color: red; font-weight: bold; text-decoration: none;">Wiener, R</del>]]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">[https</ins>:<ins style="color: red; font-weight: bold; text-decoration: none;">//www.uniprot.org/uniprot/END4_STAAR END4_STAAR] Endonuclease </ins>IV <ins style="color: red; font-weight: bold; text-decoration: none;">plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic (AP) sites, generating a 3'-hydroxyl group and a 5'-terminal sugar phosphate.</ins></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[Category: <del style="color: red; font-weight: bold; text-decoration: none;">Isupov, M.N</del>]]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">__TOC__</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"></StructureSection></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[Category: <ins style="color: red; font-weight: bold; text-decoration: none;">Large </ins>Structures]]</div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[Category: <ins style="color: red; font-weight: bold; text-decoration: none;">Staphylococcus aureus</ins>]]</div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[Category: <ins style="color: red; font-weight: bold; text-decoration: none;">Isupov MN</ins>]]</div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[Category: Kirillov S]]</div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[Category: <ins style="color: red; font-weight: bold; text-decoration: none;">Rouvinski A</ins>]]</div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[Category: <ins style="color: red; font-weight: bold; text-decoration: none;">Saper MA]]</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">[[Category: Wiener R</ins>]]</div></td></tr>
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OCA
http://52.214.119.220/wiki/index.php?title=8edd&diff=3627274&oldid=prev
OCA: Protected "8edd" [edit=sysop:move=sysop]
2022-09-14T05:48:31Z
<p>Protected "<a href="/wiki/index.php/8edd" title="8edd">8edd</a>" [edit=sysop:move=sysop]</p>
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<td colspan='2' style="background-color: white; color:black;">←Older revision</td>
<td colspan='2' style="background-color: white; color:black;">Revision as of 05:48, 14 September 2022</td>
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OCA
http://52.214.119.220/wiki/index.php?title=8edd&diff=3627273&oldid=prev
OCA: New page: '''Unreleased structure''' The entry 8edd is ON HOLD until Paper Publication Authors: Saper, M.A., Kirillov, S., Isupov, M.N., Wiener, R., Rouvinski, A. Description: Staphylococcus aur...
2022-09-14T05:48:30Z
<p>New page: '''Unreleased structure''' The entry 8edd is ON HOLD until Paper Publication Authors: Saper, M.A., Kirillov, S., Isupov, M.N., Wiener, R., Rouvinski, A. Description: Staphylococcus aur...</p>
<p><b>New page</b></p><div>'''Unreleased structure'''<br />
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The entry 8edd is ON HOLD until Paper Publication<br />
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Authors: Saper, M.A., Kirillov, S., Isupov, M.N., Wiener, R., Rouvinski, A.<br />
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Description: Staphylococcus aureus endonuclease IV Y33F mutant<br />
[[Category: Unreleased Structures]]<br />
[[Category: Rouvinski, A]]<br />
[[Category: Saper, M.A]]<br />
[[Category: Kirillov, S]]<br />
[[Category: Wiener, R]]<br />
[[Category: Isupov, M.N]]</div>
OCA