OCA at 06:56, 27 September 2023

2023-09-27T06:56:50Z

←Older revision		Revision as of 06:56, 27 September 2023
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry 8euw is ON HOLD until Paper Publication~~	+	==Cryo-EM structure of HIV-1 BG505 DS-SOSIP ENV trimer bound to VRC34.01-MM28 FAB==
-		+	<StructureSection load='8euw' size='340' side='right'caption='[[8euw]], [[Resolution\|resolution]] 2.70Å' scene=''>
-	~~Authors: Pletnev, S., Kwong, P.~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[8euw]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8EUW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8EUW FirstGlance]. <br>
-	~~Description:~~ Cryo-EM structure of HIV-1 BG505 DS-SOSIP ENV trimer bound to VRC34.01-MM28 FAB	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution\|Resolution]] 2.7Å</td></tr>
-	[[Category: ~~Unreleased~~ Structures]]	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-	[[Category: Kwong, P]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8euw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8euw OCA], [https://pdbe.org/8euw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8euw RCSB], [https://www.ebi.ac.uk/pdbsum/8euw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8euw ProSAT]</span></td></tr>
-	[[Category: Pletnev, S]]	+	</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q2N0S6_9HIV1 Q2N0S6_9HIV1] The envelope glyprotein gp160 precursor down-modulates cell surface CD4 antigen by interacting with it in the endoplasmic reticulum and blocking its transport to the cell surface (By similarity).[RuleBase:RU004292][SAAS:SAAS000328_004_020447] The gp120-gp41 heterodimer allows rapid transcytosis of the virus through CD4 negative cells such as simple epithelial monolayers of the intestinal, rectal and endocervical epithelial barriers. Both gp120 and gp41 specifically recognize glycosphingolipids galactosyl-ceramide (GalCer) or 3' sulfo-galactosyl-ceramide (GalS) present in the lipid rafts structures of epithelial cells. Binding to these alternative receptors allows the rapid transcytosis of the virus through the epithelial cells. This transcytotic vesicle-mediated transport of virions from the apical side to the basolateral side of the epithelial cells does not involve infection of the cells themselves (By similarity).[SAAS:SAAS000328_004_240990]
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Homo sapiens]]
		+	[[Category: Human immunodeficiency virus 1]]
		+	[[Category: Large Structures]]
		+	[[Category: Kwong P]]
		+	[[Category: Pletnev S]]

OCA at 05:22, 3 November 2022

2022-11-03T05:22:21Z

←Older revision		Revision as of 05:22, 3 November 2022
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 8euw is ON HOLD	+	The entry 8euw is ON HOLD until Paper Publication

	Authors: Pletnev, S., Kwong, P.		Authors: Pletnev, S., Kwong, P.

OCA: Protected "8euw" [edit=sysop:move=sysop]

2022-10-26T04:06:24Z

Protected "8euw" [edit=sysop:move=sysop]

←Older revision

Revision as of 04:06, 26 October 2022

OCA: New page: '''Unreleased structure''' The entry 8euw is ON HOLD Authors: Pletnev, S., Kwong, P. Description: Cryo-EM structure of HIV-1 BG505 DS-SOSIP ENV trimer bound to VRC34.01-MM28 FAB [[Cate...

2022-10-26T04:06:23Z

New page: '''Unreleased structure''' The entry 8euw is ON HOLD Authors: Pletnev, S., Kwong, P. Description: Cryo-EM structure of HIV-1 BG505 DS-SOSIP ENV trimer bound to VRC34.01-MM28 FAB [[Cate...

New page

'''Unreleased structure'''

The entry 8euw is ON HOLD

Authors: Pletnev, S., Kwong, P.

Description: Cryo-EM structure of HIV-1 BG505 DS-SOSIP ENV trimer bound to VRC34.01-MM28 FAB
[[Category: Unreleased Structures]]
[[Category: Kwong, P]]
[[Category: Pletnev, S]]

8euw - Revision history

OCA at 06:56, 27 September 2023

OCA at 05:22, 3 November 2022

OCA: Protected "8euw" [edit=sysop:move=sysop]

OCA: New page: '''Unreleased structure''' The entry 8euw is ON HOLD Authors: Pletnev, S., Kwong, P. Description: Cryo-EM structure of HIV-1 BG505 DS-SOSIP ENV trimer bound to VRC34.01-MM28 FAB [[Cate...