8ezf - Revision history

OCA at 10:26, 25 October 2023

2023-10-25T10:26:26Z

←Older revision		Revision as of 10:26, 25 October 2023
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[8ezf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactiplantibacillus_plantarum_WCFS1 Lactiplantibacillus plantarum WCFS1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8EZF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8EZF FirstGlance]. <br>		<table><tr><td colspan='2'>[[8ezf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactiplantibacillus_plantarum_WCFS1 Lactiplantibacillus plantarum WCFS1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8EZF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8EZF FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=ENJ:(4S)-5-methanethioyl-1-(5-O-phosphono-beta-D-ribofuranosyl)-4-sulfo-1,4-dihydropyridine-3-carbothioic+S-acid'>ENJ</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.15Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=ENJ:(4S)-5-methanethioyl-1-(5-O-phosphono-beta-D-ribofuranosyl)-4-sulfo-1,4-dihydropyridine-3-carbothioic+S-acid'>ENJ</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8ezf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8ezf OCA], [https://pdbe.org/8ezf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8ezf RCSB], [https://www.ebi.ac.uk/pdbsum/8ezf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8ezf ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8ezf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8ezf OCA], [https://pdbe.org/8ezf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8ezf RCSB], [https://www.ebi.ac.uk/pdbsum/8ezf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8ezf ProSAT]</span></td></tr>
	</table>		</table>

OCA at 06:37, 25 January 2023

2023-01-25T06:37:26Z

←Older revision		Revision as of 06:37, 25 January 2023
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-	'''Unreleased structure'''

-	~~The entry~~ 8ezf is ~~ON HOLD until Paper Publication~~	+	==A tethered niacin-derived pincer complex with a nickel-carbon or sulfite-carbon bond in lactate racemase R98A/R100A variant==
-		+	<StructureSection load='8ezf' size='340' side='right'caption='[[8ezf]], [[Resolution\|resolution]] 2.15Å' scene=''>
-	~~Authors~~:	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[8ezf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactiplantibacillus_plantarum_WCFS1 Lactiplantibacillus plantarum WCFS1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8EZF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8EZF FirstGlance]. <br>
-	~~Description~~:	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=ENJ:(4S)-5-methanethioyl-1-(5-O-phosphono-beta-D-ribofuranosyl)-4-sulfo-1,4-dihydropyridine-3-carbothioic+S-acid'>ENJ</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
-	[[Category: ~~Unreleased~~ Structures]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8ezf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8ezf OCA], [https://pdbe.org/8ezf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8ezf RCSB], [https://www.ebi.ac.uk/pdbsum/8ezf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8ezf ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/LARA_LACPL LARA_LACPL] Catalyzes the interconversion between the D- and L-isomers of lactate (PubMed:24710389, PubMed:26138974). May act as a rescue enzyme to ensure D-lactate production in physiological conditions where its production by the D-lactate dehydrogenase LdhD is not sufficient (PubMed:16166538). D-Lactate is absolutely required for growth of L.plantarum and is an essential component of the cell wall peptidoglycan in this species, where it is incorporated as the last residue of the muramoyl-pentadepsipeptide peptidoglycan precursor; its incorporation confers high level of vancomycin resistance (PubMed:16166538).<ref>PMID:16166538</ref> <ref>PMID:24710389</ref> <ref>PMID:26138974</ref>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Lactiplantibacillus plantarum WCFS1]]
		+	[[Category: Large Structures]]
		+	[[Category: Gatreddi S]]
		+	[[Category: Hausinger RP]]
		+	[[Category: Hu J]]

OCA at 08:09, 24 November 2022

2022-11-24T08:09:04Z

←Older revision		Revision as of 08:09, 24 November 2022
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 8ezf is ON HOLD	+	The entry 8ezf is ON HOLD until Paper Publication

	Authors:		Authors:

OCA: Protected "8ezf" [edit=sysop:move=sysop]

2022-11-09T05:07:12Z

Protected "8ezf" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:07, 9 November 2022

OCA: New page: '''Unreleased structure''' The entry 8ezf is ON HOLD Authors: Description: Category: Unreleased Structures

2022-11-09T05:07:09Z

New page: '''Unreleased structure''' The entry 8ezf is ON HOLD Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 8ezf is ON HOLD

Authors:

Description:
[[Category: Unreleased Structures]]