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8gj2 - Revision history
2026-04-04T13:54:01Z
Revision history for this page on the wiki
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http://52.214.119.220/wiki/index.php?title=8gj2&diff=4110700&oldid=prev
OCA at 10:08, 27 March 2024
2024-03-27T10:08:02Z
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<td colspan='2' style="background-color: white; color:black;">Revision as of 10:08, 27 March 2024</td>
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<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>'''Unreleased structure'''</div></td><td colspan="2"> </td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del style="color: red; font-weight: bold; text-decoration: none;">The entry </del>8gj2 is <del style="color: red; font-weight: bold; text-decoration: none;">ON HOLD until Paper Publication</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">==E. coli clamp loader with closed clamp on primed template DNA==</ins></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"><StructureSection load='</ins>8gj2<ins style="color: red; font-weight: bold; text-decoration: none;">' size='340' side='right'caption='[[8gj2]], [[Resolution|resolution]] 2.60&Aring;' scene=''></ins></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del style="color: red; font-weight: bold; text-decoration: none;">Authors</del>: <del style="color: red; font-weight: bold; text-decoration: none;">Oakley</del>, <del style="color: red; font-weight: bold; text-decoration: none;">A</del>.<del style="color: red; font-weight: bold; text-decoration: none;">J</del>., <del style="color: red; font-weight: bold; text-decoration: none;">Xu, Z</del>.-<del style="color: red; font-weight: bold; text-decoration: none;">Q</del>., <del style="color: red; font-weight: bold; text-decoration: none;">Dixon</del>, <del style="color: red; font-weight: bold; text-decoration: none;">N</del>.<del style="color: red; font-weight: bold; text-decoration: none;">E</del>.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">== Structural highlights ==</ins></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"><table><tr><td colspan='2'>[[8gj2]] </ins>is <ins style="color: red; font-weight: bold; text-decoration: none;">a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8GJ2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8GJ2 FirstGlance]. <br></ins></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del style="color: red; font-weight: bold; text-decoration: none;">Description</del>: <del style="color: red; font-weight: bold; text-decoration: none;">E</del>. <del style="color: red; font-weight: bold; text-decoration: none;">coli clamp loader </del>with <del style="color: red; font-weight: bold; text-decoration: none;">closed clamp </del>on <del style="color: red; font-weight: bold; text-decoration: none;">primed template </del>DNA</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"></td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.6&#8491;</td></tr></ins></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[Category: <del style="color: red; font-weight: bold; text-decoration: none;">Unreleased </del>Structures]]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands</ins>:<ins style="color: red; font-weight: bold; text-decoration: none;">]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene></ins>, <ins style="color: red; font-weight: bold; text-decoration: none;"><scene name='pdbligand=ALF:TETRAFLUOROALUMINATE+ION'>ALF</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr></ins></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[Category: Dixon<del style="color: red; font-weight: bold; text-decoration: none;">, N.E</del>]]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia</ins>.<ins style="color: red; font-weight: bold; text-decoration: none;">org/fgij/fg</ins>.<ins style="color: red; font-weight: bold; text-decoration: none;">htm?mol=8gj2 FirstGlance]</ins>, <ins style="color: red; font-weight: bold; text-decoration: none;">[http://oca</ins>.<ins style="color: red; font-weight: bold; text-decoration: none;">weizmann.ac.il/oca</ins>-<ins style="color: red; font-weight: bold; text-decoration: none;">bin/ocaids?id=8gj2 OCA], [https://pdbe</ins>.<ins style="color: red; font-weight: bold; text-decoration: none;">org/8gj2 PDBe]</ins>, <ins style="color: red; font-weight: bold; text-decoration: none;">[https://www.rcsb.org/pdb/explore.do?structureId=8gj2 RCSB]</ins>, <ins style="color: red; font-weight: bold; text-decoration: none;">[https://www</ins>.<ins style="color: red; font-weight: bold; text-decoration: none;">ebi</ins>.<ins style="color: red; font-weight: bold; text-decoration: none;">ac.uk/pdbsum/8gj2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8gj2 ProSAT]</span></td></tr></ins></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[Category: Oakley<del style="color: red; font-weight: bold; text-decoration: none;">, A.J</del>]]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"></table></ins></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[Category: Xu<del style="color: red; font-weight: bold; text-decoration: none;">, </del>Z<del style="color: red; font-weight: bold; text-decoration: none;">.</del>-Q]]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">== Function ==</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">[https</ins>:<ins style="color: red; font-weight: bold; text-decoration: none;">//www</ins>.<ins style="color: red; font-weight: bold; text-decoration: none;">uniprot.org/uniprot/HOLA_ECOLI HOLA_ECOLI] DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The delta subunit seems to interact </ins>with <ins style="color: red; font-weight: bold; text-decoration: none;">the gamma subunit to transfer the beta subunit </ins>on <ins style="color: red; font-weight: bold; text-decoration: none;">the </ins>DNA<ins style="color: red; font-weight: bold; text-decoration: none;">.</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">__TOC__</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"></StructureSection></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">[[Category: Escherichia coli]]</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">[[Category: Escherichia coli K-12]]</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[Category: <ins style="color: red; font-weight: bold; text-decoration: none;">Large </ins>Structures]]</div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[Category: Dixon <ins style="color: red; font-weight: bold; text-decoration: none;">NE</ins>]]</div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[Category: Oakley <ins style="color: red; font-weight: bold; text-decoration: none;">AJ</ins>]]</div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[Category: Xu Z-Q]]</div></td></tr>
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OCA
http://52.214.119.220/wiki/index.php?title=8gj2&diff=3759890&oldid=prev
OCA at 05:22, 3 May 2023
2023-05-03T05:22:21Z
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<td colspan='2' style="background-color: white; color:black;">Revision as of 05:22, 3 May 2023</td>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>'''Unreleased structure'''</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>'''Unreleased structure'''</div></td></tr>
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<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>The entry 8gj2 is ON HOLD </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>The entry 8gj2 is ON HOLD <ins style="color: red; font-weight: bold; text-decoration: none;"> until Paper Publication</ins></div></td></tr>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Authors: Oakley, A.J., Xu, Z.-Q., Dixon, N.E.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Authors: Oakley, A.J., Xu, Z.-Q., Dixon, N.E.</div></td></tr>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>[[Category: Dixon, N.E]]</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>[[Category: Dixon, N.E]]</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[Category: Xu, Z.-Q]]</div></td><td colspan="2"> </td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>[[Category: Oakley, A.J]]</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>[[Category: Oakley, A.J]]</div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[Category: Xu, Z.-Q]]</div></td></tr>
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OCA
http://52.214.119.220/wiki/index.php?title=8gj2&diff=3735987&oldid=prev
OCA: Protected "8gj2" [edit=sysop:move=sysop]
2023-03-22T05:43:47Z
<p>Protected "<a href="/wiki/index.php/8gj2" title="8gj2">8gj2</a>" [edit=sysop:move=sysop]</p>
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<td colspan='2' style="background-color: white; color:black;">Revision as of 05:43, 22 March 2023</td>
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OCA
http://52.214.119.220/wiki/index.php?title=8gj2&diff=3735986&oldid=prev
OCA: New page: '''Unreleased structure''' The entry 8gj2 is ON HOLD Authors: Oakley, A.J., Xu, Z.-Q., Dixon, N.E. Description: E. coli clamp loader with closed clamp on primed template DNA [[Category...
2023-03-22T05:43:46Z
<p>New page: '''Unreleased structure''' The entry 8gj2 is ON HOLD Authors: Oakley, A.J., Xu, Z.-Q., Dixon, N.E. Description: E. coli clamp loader with closed clamp on primed template DNA [[Category...</p>
<p><b>New page</b></p><div>'''Unreleased structure'''<br />
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The entry 8gj2 is ON HOLD <br />
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Authors: Oakley, A.J., Xu, Z.-Q., Dixon, N.E.<br />
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Description: E. coli clamp loader with closed clamp on primed template DNA<br />
[[Category: Unreleased Structures]]<br />
[[Category: Dixon, N.E]]<br />
[[Category: Xu, Z.-Q]]<br />
[[Category: Oakley, A.J]]</div>
OCA