OCA at 23:15, 27 December 2023

2023-12-27T23:15:45Z

←Older revision		Revision as of 23:15, 27 December 2023
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-	'''Unreleased structure'''

-	~~The entry~~ 8spe is ~~ON HOLD until Paper~~ Publication	+	==Crystal structure of Bax core domain BH3-groove dimer - tetrameric fraction P31==
		+	<StructureSection load='8spe' size='340' side='right'caption='[[8spe]], [[Resolution\|resolution]] 2.30Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[8spe]] is a 36 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8SPE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8SPE FirstGlance]. <br>
		+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.3Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8spe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8spe OCA], [https://pdbe.org/8spe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8spe RCSB], [https://www.ebi.ac.uk/pdbsum/8spe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8spe ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/BAX_HUMAN BAX_HUMAN] Accelerates programmed cell death by binding to, and antagonizing the apoptosis repressor BCL2 or its adenovirus homolog E1B 19k protein. Under stress conditions, undergoes a conformation change that causes translocation to the mitochondrion membrane, leading to the release of cytochrome c that then triggers apoptosis. Promotes activation of CASP3, and thereby apoptosis.<ref>PMID:8358790</ref> <ref>PMID:10772918</ref> <ref>PMID:8521816</ref> <ref>PMID:16113678</ref> <ref>PMID:18948948</ref> <ref>PMID:21199865</ref>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The B-cell lymphoma 2 (BCL2) family members, BCL2-associated protein X (BAX) and BCL2 homologous antagonist killer (BAK), are required for programmed cell death via the mitochondrial pathway. When cells are stressed, damaged or redundant, the balance of power between the BCL2 family of proteins shifts towards BAX and BAK, allowing their transition from an inactive, monomeric state to a membrane-active oligomeric form that releases cytochrome c from the mitochondrial intermembrane space. That oligomeric state has an essential intermediate, a symmetric homodimer of BAX or BAK. Here we describe crystal structures of dimers of the core domain of BAX, comprising its helices alpha2-alpha5. These structures provide an atomic resolution description of the interactions that drive BAX homo-dimerisation and insights into potential interaction between core domain dimers and membrane lipids. The previously identified BAK lipid-interacting sites are not conserved with BAX and are likely to determine the differences between them in their interactions with lipids. We also describe structures of heterodimers of BAK/BAX core domains, yielding further insight into the differences in lipid binding between BAX and BAK.

-	~~Authors:~~ Miller, M.S., ~~Cowan~~, ~~A.D.~~, Colman, P.M.~~, Czabotar, P~~.E.	+	Sequence differences between BAX and BAK core domains manifest as differences in their interactions with lipids.,Miller MS, Cowan AD, Brouwer JM, Smyth ST, Peng L, Wardak AZ, Uren RT, Luo C, Roy MJ, Shah S, Tan Z, Reid GE, Colman PM, Czabotar PE FEBS J. 2023 Dec 13. doi: 10.1111/febs.17031. PMID:38088212<ref>PMID:38088212</ref>

-	~~Description: Crystal structure~~ of ~~Bax core domain BH3~~-~~groove dimer~~ -~~tetrameric fraction P31~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	[[Category: ~~Unreleased~~ Structures]]	+	</div>
-	[[Category: Colman~~, P.M~~]]	+	<div class="pdbe-citations 8spe" style="background-color:#fffaf0;"></div>
-	[[Category: ~~Czabotar, P.E~~]]	+	== References ==
-	[[Category: ~~Cowan, A.D~~]]	+	<references/>
-	[[Category: Miller~~, M.S~~]]	+	__TOC__
		+	</StructureSection>
		+	[[Category: Homo sapiens]]
		+	[[Category: Large Structures]]
		+	[[Category: Colman PM]]
		+	[[Category: Cowan AD]]
		+	[[Category: Czabotar PE]]
		+	[[Category: Miller MS]]

OCA at 06:45, 14 June 2023

2023-06-14T06:45:38Z

←Older revision		Revision as of 06:45, 14 June 2023
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 8spe is ON HOLD	+	The entry 8spe is ON HOLD until Paper Publication

	Authors: Miller, M.S., Cowan, A.D., Colman, P.M., Czabotar, P.E.		Authors: Miller, M.S., Cowan, A.D., Colman, P.M., Czabotar, P.E.
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	Description: Crystal structure of Bax core domain BH3-groove dimer -tetrameric fraction P31		Description: Crystal structure of Bax core domain BH3-groove dimer -tetrameric fraction P31
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
		+	[[Category: Colman, P.M]]
	[[Category: Czabotar, P.E]]		[[Category: Czabotar, P.E]]
	[[Category: Cowan, A.D]]		[[Category: Cowan, A.D]]
	[[Category: Miller, M.S]]		[[Category: Miller, M.S]]
-	[[Category: Colman, P.M]]

OCA: Protected "8spe" [edit=sysop:move=sysop]

2023-05-10T05:24:40Z

Protected "8spe" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:24, 10 May 2023

OCA: New page: '''Unreleased structure''' The entry 8spe is ON HOLD Authors: Miller, M.S., Cowan, A.D., Colman, P.M., Czabotar, P.E. Description: Crystal structure of Bax core domain BH3-groove dimer...

2023-05-10T05:24:39Z

New page: '''Unreleased structure''' The entry 8spe is ON HOLD Authors: Miller, M.S., Cowan, A.D., Colman, P.M., Czabotar, P.E. Description: Crystal structure of Bax core domain BH3-groove dimer...

New page

'''Unreleased structure'''

The entry 8spe is ON HOLD

Authors: Miller, M.S., Cowan, A.D., Colman, P.M., Czabotar, P.E.

Description: Crystal structure of Bax core domain BH3-groove dimer -tetrameric fraction P31
[[Category: Unreleased Structures]]
[[Category: Czabotar, P.E]]
[[Category: Cowan, A.D]]
[[Category: Miller, M.S]]
[[Category: Colman, P.M]]

8spe - Revision history

OCA at 23:15, 27 December 2023

OCA at 06:45, 14 June 2023

OCA: Protected "8spe" [edit=sysop:move=sysop]

OCA: New page: '''Unreleased structure''' The entry 8spe is ON HOLD Authors: Miller, M.S., Cowan, A.D., Colman, P.M., Czabotar, P.E. Description: Crystal structure of Bax core domain BH3-groove dimer...