OCA at 11:50, 13 December 2023

2023-12-13T11:50:21Z

←Older revision		Revision as of 11:50, 13 December 2023
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-	'''Unreleased structure'''

-	~~The entry~~ 8x2h is ~~ON HOLD until Paper Publication~~	+	==Cryo-EM structure of the TcsL at pH 5.0 in its closed conformation==
-		+	<StructureSection load='8x2h' size='340' side='right'caption='[[8x2h]], [[Resolution\|resolution]] 2.90Å' scene=''>
-	~~Authors~~:	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[8x2h]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Paeniclostridium_sordellii_ATCC_9714 Paeniclostridium sordellii ATCC 9714]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8X2H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8X2H FirstGlance]. <br>
-	~~Description~~:	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution\|Resolution]] 2.9Å</td></tr>
-	[[Category: ~~Unreleased~~ Structures]]	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8x2h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8x2h OCA], [https://pdbe.org/8x2h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8x2h RCSB], [https://www.ebi.ac.uk/pdbsum/8x2h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8x2h ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/TCSL3_PAES9 TCSL3_PAES9] Precursor of a cytotoxin that targets the vascular endothelium, inducing an anti-inflammatory effect and resulting in lethal toxic shock syndrome (PubMed:19527792, PubMed:21199912). TcsL constitutes the main toxin that mediates the pathology of P.sordellii infection, an anaerobic Gram-positive bacterium found in soil and in the gastrointestinal and vaginal tracts of animals and humans; although the majority of carriers are asymptomatic, pathogenic P.sordellii infections arise rapidly and are highly lethal (By similarity). This form constitutes the precursor of the toxin: it enters into host cells and mediates autoprocessing to release the active toxin (Glucosyltransferase TcsL) into the host cytosol (By similarity). Targets vascular endothelium by binding to the semaphorin proteins SEMA6A and SEMA6B, and enters host cells via clathrin-mediated endocytosis (By similarity). Once entered into host cells, acidification in the endosome promotes the membrane insertion of the translocation region and formation of a pore, leading to translocation of the GT44 and peptidase C80 domains across the endosomal membrane (By similarity) (PubMed:11500421). This activates the peptidase C80 domain and autocatalytic processing, releasing the N-terminal part (Glucosyltransferase TcsL), which constitutes the active part of the toxin, in the cytosol (By similarity).[UniProtKB:P18177][UniProtKB:Q46342]<ref>PMID:11500421</ref> <ref>PMID:19527792</ref> <ref>PMID:21199912</ref> Active form of the toxin, which is released into the host cytosol following autoprocessing and inactivates small GTPases. Acts by mediating monoglucosylation of small GTPases of the Ras (H-Ras/HRAS, K-Ras/KRAS and N-Ras/NRAS) family in host cells at the conserved threonine residue located in the switch I region ('Thr-37/35'), using UDP-alpha-D-glucose as the sugar donor. Also able to catalyze monoglucosylation of some members of the Rho family (Rac1 and Rap2A), but with less efficiency than with Ras proteins. Monoglucosylation of host small GTPases completely prevents the recognition of the downstream effector, blocking the GTPases in their inactive form and leading to apoptosis. Induces an anti-inflammatory effect, mainly by inactivating Ras proteins which results in blockage of the cell cycle and killing of immune cells. The absence or moderate local inflammatory response allows C.sordellii spreading in deep tissues, production of toxin which is released in the general circulation and causes a toxic shock syndrome.[UniProtKB:Q46342]
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Large Structures]]
		+	[[Category: Paeniclostridium sordellii ATCC 9714]]
		+	[[Category: Tao L]]
		+	[[Category: Zhan X]]

OCA at 10:21, 29 November 2023

2023-11-29T10:21:14Z

←Older revision		Revision as of 10:21, 29 November 2023
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 8x2h is ON HOLD	+	The entry 8x2h is ON HOLD until Paper Publication

	Authors:		Authors:

OCA: Protected "8x2h" [edit=sysop:move=sysop]

2023-11-15T05:59:46Z

Protected "8x2h" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:59, 15 November 2023

OCA: New page: '''Unreleased structure''' The entry 8x2h is ON HOLD Authors: Description: Category: Unreleased Structures

2023-11-15T05:59:44Z

New page: '''Unreleased structure''' The entry 8x2h is ON HOLD Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 8x2h is ON HOLD

Authors:

Description:
[[Category: Unreleased Structures]]

8x2h - Revision history

OCA at 11:50, 13 December 2023

OCA at 10:21, 29 November 2023

OCA: Protected "8x2h" [edit=sysop:move=sysop]

OCA: New page: '''Unreleased structure''' The entry 8x2h is ON HOLD Authors: Description: Category: Unreleased Structures