http://52.214.119.220/wiki/index.php?action=history&feed=atom&title=User%3AChristina_Manner%2FSandbox_810 2026-04-14T13:17:00Z Revision history for this page on the wiki MediaWiki 1.11.2 http://52.214.119.220/wiki/index.php?title=User:Christina_Manner/Sandbox_810&diff=1885286&oldid=prev 2014-01-09T07:24:54Z

<p></p> <table style="background-color: white; color:black;"> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr> <td colspan='2' style="background-color: white; color:black;">←Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 07:24, 9 January 2014</td> </tr> <tr><td colspan="2" class="diff-lineno">Line 22:</td> <td colspan="2" class="diff-lineno">Line 22:</td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>The dimers AB and CD interact with each other via molecular interactions between B and C. Additionally, the palindromic sequence of the 'tra' box causes a base stacking between the beginning and the end of the sequence. </div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>The dimers AB and CD interact with each other via molecular interactions between B and C. Additionally, the palindromic sequence of the 'tra' box causes a base stacking between the beginning and the end of the sequence. </div></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>As A and B are differently elongated, there is a dimeric asymmetry that has two consequences for the function. At first, the &lt;scene name='57/574296/N-ter_dimer/3'&gt;N-terminal parts&lt;/scene&gt; of the two monomers have different positions. The N-terminal part of A is between the ligand-binding domain and the DNA-binding domain in the center of the protein. In opposition to that, the N-terminal part of B is located externally. Moreover, there is a &lt;scene name='57/574296/Neg_charged_dna_binding_region/2'&gt;distribution of charge&lt;/scene&gt; at the surface of the dimer. Because of that, the DNA-binding domain forms a long and basic region for the interaction with DNA, whereas the C-terminal residues form a positively charged patch exposed to the solvent. This region might be involved in protein-protein interaction with TraM &lt;ref name = Volpari/&gt;. TraM binds to TraR and prevents it from binding to the DNA and therefore prevents the activation of the transcription of the 'tra' genes &lt;ref name = Volpari/&gt;.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>As A and B are differently elongated, there is a dimeric asymmetry that has two consequences for the function. At first, the &lt;scene name='57/574296/N-ter_dimer/3'&gt;N-terminal parts&lt;/scene&gt; of the two monomers have different positions. The N-terminal part of A is between the ligand-binding domain and the DNA-binding domain in the center of the protein. In opposition to that, the N-terminal part of B is located externally. Moreover, there is a &lt;scene name='57/574296/Neg_charged_dna_binding_region/2'&gt;distribution of charge&lt;/scene&gt; at the surface of the dimer. Because of that, the DNA-binding domain forms a long and basic region for the interaction with DNA, whereas the C-terminal residues form a positively charged patch exposed to the solvent. This region might be involved in protein-protein interaction with TraM &lt;ref name = Volpari/&gt;. TraM binds to TraR and prevents it from binding to the DNA and therefore prevents the activation of the transcription of the 'tra' genes &lt;ref name = Volpari/&gt;.</div></td></tr> <tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>==='''Ligand <del style="color: red; font-weight: bold; text-decoration: none;">binding domain</del>'''===</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>&#160;</div></td></tr> <tr><td colspan="2">&nbsp;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>==='''Ligand <ins style="color: red; font-weight: bold; text-decoration: none;">Binding Domain</ins>'''===</div></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>The &lt;scene name='57/574296/Ligand_binding_secondary/10'&gt;ligand binding domain&lt;/scene&gt; includes the residues 1 to 162. The ligand AAI is surrounded by three α-helices (α3, α4 and α5) and a five-stranded antiparallel β-sheet. The order of this β-sheet is 2-1-5-4-3. </div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>The &lt;scene name='57/574296/Ligand_binding_secondary/10'&gt;ligand binding domain&lt;/scene&gt; includes the residues 1 to 162. The ligand AAI is surrounded by three α-helices (α3, α4 and α5) and a five-stranded antiparallel β-sheet. The order of this β-sheet is 2-1-5-4-3. </div></td></tr> <tr><td colspan="2" class="diff-lineno">Line 29:</td> <td colspan="2" class="diff-lineno">Line 30:</td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Following the ligand binding domain, the residues 163 to 175 form the &lt;scene name='57/574296/Linker/3'&gt;linker&lt;/scene&gt; to the DNA binding domain. The residues 166 to 169 are disordered and cannot be seen in the structural model &lt;ref name = Vannini/&gt;. </div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Following the ligand binding domain, the residues 163 to 175 form the &lt;scene name='57/574296/Linker/3'&gt;linker&lt;/scene&gt; to the DNA binding domain. The residues 166 to 169 are disordered and cannot be seen in the structural model &lt;ref name = Vannini/&gt;. </div></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>==='''DNA <del style="color: red; font-weight: bold; text-decoration: none;">binding domain</del>'''===</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>==='''DNA <ins style="color: red; font-weight: bold; text-decoration: none;">Binding Domain</ins>'''===</div></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>The DNA binding domain contains four &lt;scene name='57/574296/Dna_binding_domain_alpha/1'&gt; α-helices &lt;/scene&gt; (α7, α8, α9, α10) and is provided by the C-terminal part of the protein by the residues 176 to 234. In monomer A or C, the first residues of α7, the last residues of α8 and the residues 232 to 234 form polar bonds with the N-terminal part of the ligand binding domain. In the B or D monomer, no such interactions were observed. Besides, helices α8 and α9 form the &lt;scene name='57/574296/Hth/1'&gt;HTH&lt;/scene&gt; (Helix-Turn-Helix) motif &lt;ref name = Vannini/&gt;. </div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>The DNA binding domain contains four &lt;scene name='57/574296/Dna_binding_domain_alpha/1'&gt; α-helices &lt;/scene&gt; (α7, α8, α9, α10) and is provided by the C-terminal part of the protein by the residues 176 to 234. In monomer A or C, the first residues of α7, the last residues of α8 and the residues 232 to 234 form polar bonds with the N-terminal part of the ligand binding domain. In the B or D monomer, no such interactions were observed. Besides, helices α8 and α9 form the &lt;scene name='57/574296/Hth/1'&gt;HTH&lt;/scene&gt; (Helix-Turn-Helix) motif &lt;ref name = Vannini/&gt;. </div></td></tr> </table>

Christina Manner http://52.214.119.220/wiki/index.php?title=User:Christina_Manner/Sandbox_810&diff=1885281&oldid=prev 2014-01-08T23:37:29Z

<p></p> <table style="background-color: white; color:black;"> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr> <td colspan='2' style="background-color: white; color:black;">←Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 23:37, 8 January 2014</td> </tr> <tr><td colspan="2" class="diff-lineno">Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[Image:344px-1h0m.png|left|bottom|150px]] '''TraR''' is the transcription activation factor of the ''tra'' genes in ''Agrobacterium tumefaciens''. These genes are responsible for the conjugate gene transfer of the tumor inducing (Ti) plasmid. TraR has a ligand binding domain for its <del style="color: red; font-weight: bold; text-decoration: none;">autoinduver </del>3-oxooctanoyl-homoserine lactone (OOHL) and a DNA binding domain for the palindromic ''tra'' box.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[Image:344px-1h0m.png|left|bottom|150px]] '''TraR''' is the transcription activation factor of the ''tra'' genes in ''Agrobacterium tumefaciens''. These genes are responsible for the conjugate gene transfer of the tumor inducing (Ti) plasmid. TraR has a ligand binding domain for its <ins style="color: red; font-weight: bold; text-decoration: none;">autoinducer </ins>3-oxooctanoyl-homoserine lactone (OOHL) and a DNA binding domain for the palindromic ''tra'' box.</div></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> </table>

Christina Manner http://52.214.119.220/wiki/index.php?title=User:Christina_Manner/Sandbox_810&diff=1885280&oldid=prev 2014-01-08T23:36:46Z

<p></p> <table style="background-color: white; color:black;"> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr> <td colspan='2' style="background-color: white; color:black;">←Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 23:36, 8 January 2014</td> </tr> <tr><td colspan="2" class="diff-lineno">Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[Image:344px-1h0m.png|left|bottom|150px]] '''TraR''' is the transcription activation factor of the 'tra' genes in 'Agrobacterium tumefaciens'. These genes are responsible for the conjugate gene transfer of the tumor inducing (Ti) plasmid. TraR has a ligand binding domain for its autoinduver 3-oxooctanoyl-homoserine lactone (OOHL) and a DNA binding domain for the palindromic 'tra' box.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[Image:344px-1h0m.png|left|bottom|150px]] '''TraR''' is the transcription activation factor of the <ins style="color: red; font-weight: bold; text-decoration: none;">'</ins>'tra<ins style="color: red; font-weight: bold; text-decoration: none;">'</ins>' genes in <ins style="color: red; font-weight: bold; text-decoration: none;">'</ins>'Agrobacterium tumefaciens<ins style="color: red; font-weight: bold; text-decoration: none;">'</ins>'. These genes are responsible for the conjugate gene transfer of the tumor inducing (Ti) plasmid. TraR has a ligand binding domain for its autoinduver 3-oxooctanoyl-homoserine lactone (OOHL) and a DNA binding domain for the palindromic <ins style="color: red; font-weight: bold; text-decoration: none;">'</ins>'tra<ins style="color: red; font-weight: bold; text-decoration: none;">'</ins>' box.</div></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> </table>

Christina Manner http://52.214.119.220/wiki/index.php?title=User:Christina_Manner/Sandbox_810&diff=1885279&oldid=prev 2014-01-08T23:33:46Z

<p></p> <table style="background-color: white; color:black;"> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr> <td colspan='2' style="background-color: white; color:black;">←Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 23:33, 8 January 2014</td> </tr> <tr><td colspan="2" class="diff-lineno">Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[Image:344px-1h0m.png<del style="color: red; font-weight: bold; text-decoration: none;">|bottom</del>|left|150px]] '''TraR''' is the transcription activation factor of the 'tra' genes in 'Agrobacterium tumefaciens'. These genes are responsible for the conjugate gene transfer of the tumor inducing (Ti) plasmid. TraR has a ligand binding domain for its autoinduver 3-oxooctanoyl-homoserine lactone (OOHL) and a DNA binding domain for the palindromic 'tra' box.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[Image:344px-1h0m.png|left<ins style="color: red; font-weight: bold; text-decoration: none;">|bottom</ins>|150px]] '''TraR''' is the transcription activation factor of the 'tra' genes in 'Agrobacterium tumefaciens'. These genes are responsible for the conjugate gene transfer of the tumor inducing (Ti) plasmid. TraR has a ligand binding domain for its autoinduver 3-oxooctanoyl-homoserine lactone (OOHL) and a DNA binding domain for the palindromic 'tra' box.</div></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> </table>

Christina Manner http://52.214.119.220/wiki/index.php?title=User:Christina_Manner/Sandbox_810&diff=1885278&oldid=prev 2014-01-08T23:32:18Z

<p></p> <table style="background-color: white; color:black;"> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr> <td colspan='2' style="background-color: white; color:black;">←Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 23:32, 8 January 2014</td> </tr> <tr><td colspan="2" class="diff-lineno">Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[Image:344px-1h0m.png|<del style="color: red; font-weight: bold; text-decoration: none;">middle</del>|left|150px]] '''TraR''' is the transcription activation factor of the 'tra' genes in 'Agrobacterium tumefaciens'. These genes are responsible for the conjugate gene transfer of the tumor inducing (Ti) plasmid. TraR has a ligand binding domain for its autoinduver 3-oxooctanoyl-homoserine lactone (OOHL) and a DNA binding domain for the palindromic 'tra' box.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[Image:344px-1h0m.png|<ins style="color: red; font-weight: bold; text-decoration: none;">bottom</ins>|left|150px]] '''TraR''' is the transcription activation factor of the 'tra' genes in 'Agrobacterium tumefaciens'. These genes are responsible for the conjugate gene transfer of the tumor inducing (Ti) plasmid. TraR has a ligand binding domain for its autoinduver 3-oxooctanoyl-homoserine lactone (OOHL) and a DNA binding domain for the palindromic 'tra' box.</div></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> </table>

Christina Manner http://52.214.119.220/wiki/index.php?title=User:Christina_Manner/Sandbox_810&diff=1885277&oldid=prev 2014-01-08T23:31:52Z

<p></p> <table style="background-color: white; color:black;"> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr> <td colspan='2' style="background-color: white; color:black;">←Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 23:31, 8 January 2014</td> </tr> <tr><td colspan="2" class="diff-lineno">Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[Image:344px-1h0m.png|<del style="color: red; font-weight: bold; text-decoration: none;">thumb</del>|left|150px]] '''TraR''' is the transcription activation factor of the 'tra' genes in 'Agrobacterium tumefaciens'. These genes are responsible for the conjugate gene transfer of the tumor inducing (Ti) plasmid. TraR has a ligand binding domain for its autoinduver 3-oxooctanoyl-homoserine lactone (OOHL) and a DNA binding domain for the palindromic 'tra' box.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[Image:344px-1h0m.png|<ins style="color: red; font-weight: bold; text-decoration: none;">middle</ins>|left|150px]] '''TraR''' is the transcription activation factor of the 'tra' genes in 'Agrobacterium tumefaciens'. These genes are responsible for the conjugate gene transfer of the tumor inducing (Ti) plasmid. TraR has a ligand binding domain for its autoinduver 3-oxooctanoyl-homoserine lactone (OOHL) and a DNA binding domain for the palindromic 'tra' box.</div></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> </table>

Christina Manner http://52.214.119.220/wiki/index.php?title=User:Christina_Manner/Sandbox_810&diff=1885276&oldid=prev 2014-01-08T23:30:24Z

<p></p> <table style="background-color: white; color:black;"> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr> <td colspan='2' style="background-color: white; color:black;">←Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 23:30, 8 January 2014</td> </tr> <tr><td colspan="2" class="diff-lineno">Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[Image:344px-1h0m.png|thumb|left|<del style="color: red; font-weight: bold; text-decoration: none;">100px</del>]] '''TraR''' is the transcription activation factor of the 'tra' genes in 'Agrobacterium tumefaciens'. These genes are responsible for the conjugate gene transfer of the tumor inducing (Ti) plasmid. TraR has a ligand binding domain for its autoinduver 3-oxooctanoyl-homoserine lactone (OOHL) and a DNA binding domain for the palindromic 'tra' box.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[Image:344px-1h0m.png|thumb|left|<ins style="color: red; font-weight: bold; text-decoration: none;">150px</ins>]] '''TraR''' is the transcription activation factor of the 'tra' genes in 'Agrobacterium tumefaciens'. These genes are responsible for the conjugate gene transfer of the tumor inducing (Ti) plasmid. TraR has a ligand binding domain for its autoinduver 3-oxooctanoyl-homoserine lactone (OOHL) and a DNA binding domain for the palindromic 'tra' box.</div></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> </table>

Christina Manner http://52.214.119.220/wiki/index.php?title=User:Christina_Manner/Sandbox_810&diff=1885275&oldid=prev 2014-01-08T23:30:06Z

<p></p> <table style="background-color: white; color:black;"> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr> <td colspan='2' style="background-color: white; color:black;">←Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 23:30, 8 January 2014</td> </tr> <tr><td colspan="2" class="diff-lineno">Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[Image:344px-1h0m.png|thumb|left|<del style="color: red; font-weight: bold; text-decoration: none;">150px</del>]] '''TraR''' is the transcription activation factor of the 'tra' genes in 'Agrobacterium tumefaciens'. These genes are responsible for the conjugate gene transfer of the tumor inducing (Ti) plasmid. TraR has a ligand binding domain for its autoinduver 3-oxooctanoyl-homoserine lactone (OOHL) and a DNA binding domain for the palindromic 'tra' box.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[Image:344px-1h0m.png|thumb|left|<ins style="color: red; font-weight: bold; text-decoration: none;">100px</ins>]] '''TraR''' is the transcription activation factor of the 'tra' genes in 'Agrobacterium tumefaciens'. These genes are responsible for the conjugate gene transfer of the tumor inducing (Ti) plasmid. TraR has a ligand binding domain for its autoinduver 3-oxooctanoyl-homoserine lactone (OOHL) and a DNA binding domain for the palindromic 'tra' box.</div></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> </table>

Christina Manner http://52.214.119.220/wiki/index.php?title=User:Christina_Manner/Sandbox_810&diff=1885273&oldid=prev 2014-01-08T23:24:00Z

<p></p> <table style="background-color: white; color:black;"> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr> <td colspan='2' style="background-color: white; color:black;">←Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 23:24, 8 January 2014</td> </tr> <tr><td colspan="2" class="diff-lineno">Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[Image:344px-1h0m.png|left|150px]] '''TraR''' is the transcription activation factor of the 'tra' genes in 'Agrobacterium tumefaciens'. These genes are responsible for the conjugate gene transfer of the tumor inducing (Ti) plasmid. TraR has a ligand binding domain for its autoinduver 3-oxooctanoyl-homoserine lactone (OOHL) and a DNA binding domain for the palindromic 'tra' box.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[Image:344px-1h0m.png<ins style="color: red; font-weight: bold; text-decoration: none;">|thumb</ins>|left|150px]] '''TraR''' is the transcription activation factor of the 'tra' genes in 'Agrobacterium tumefaciens'. These genes are responsible for the conjugate gene transfer of the tumor inducing (Ti) plasmid. TraR has a ligand binding domain for its autoinduver 3-oxooctanoyl-homoserine lactone (OOHL) and a DNA binding domain for the palindromic 'tra' box.</div></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> </table>

Christina Manner http://52.214.119.220/wiki/index.php?title=User:Christina_Manner/Sandbox_810&diff=1885272&oldid=prev 2014-01-08T23:23:39Z

<p></p> <table style="background-color: white; color:black;"> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr> <td colspan='2' style="background-color: white; color:black;">←Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 23:23, 8 January 2014</td> </tr> <tr><td colspan="2" class="diff-lineno">Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[Image:344px-1h0m.png|150px]] '''TraR''' is the transcription activation factor of the 'tra' genes in 'Agrobacterium tumefaciens'. These genes are responsible for the conjugate gene transfer of the tumor inducing (Ti) plasmid. TraR has a ligand binding domain for its autoinduver 3-oxooctanoyl-homoserine lactone (OOHL) and a DNA binding domain for the palindromic 'tra' box.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[Image:344px-1h0m.png<ins style="color: red; font-weight: bold; text-decoration: none;">|left</ins>|150px]] '''TraR''' is the transcription activation factor of the 'tra' genes in 'Agrobacterium tumefaciens'. These genes are responsible for the conjugate gene transfer of the tumor inducing (Ti) plasmid. TraR has a ligand binding domain for its autoinduver 3-oxooctanoyl-homoserine lactone (OOHL) and a DNA binding domain for the palindromic 'tra' box.</div></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> </table>

Christina Manner