1bjf - Revision history

OCA at 06:36, 7 February 2024

OCA — Wed, 07 Feb 2024 06:36:51 GMT

←Older revision		Revision as of 06:36, 7 February 2024
Line 3:		Line 3:
	<StructureSection load='1bjf' size='340' side='right'caption='[[1bjf]], [[Resolution\|resolution]] 2.40Å' scene=''>		<StructureSection load='1bjf' size='340' side='right'caption='[[1bjf]], [[Resolution\|resolution]] 2.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1bjf]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BJF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BJF FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1bjf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BJF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BJF FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.4Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bjf OCA], [https://pdbe.org/1bjf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bjf RCSB], [https://www.ebi.ac.uk/pdbsum/1bjf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bjf ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bjf OCA], [https://pdbe.org/1bjf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bjf RCSB], [https://www.ebi.ac.uk/pdbsum/1bjf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bjf ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/NCALD_BOVIN NCALD_BOVIN]] May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions.	+	[https://www.uniprot.org/uniprot/NCALD_BOVIN NCALD_BOVIN] May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 19:		Line 20:
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1bjf ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1bjf ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
-	<div style="background-color:#fffaf0;">
-	== Publication Abstract from PubMed ==
-	The crystal structure of calcium-bound unmyristoylated bovine neurocalcin from Escherichia coli has been determined at 2.4 A resolution. The three-dimensional structure reveals a highly compact structure consisting of: (i) two pairs of calcium-binding EF-hands (EF1-EF2 and EF3-EF4); (ii) a calcium ion bound at EF2, EF3 and EF4 sites; and (iii) an EF1-hand that is disabled from calcium-binding due to a Cys-Pro sequence in the Ca2+-binding loop. The crystal structure of neurocalcin resembles photoreceptor recoverin in overall topology, however its EF2- and EF4-hands differ. Recently, neurocalcin in the calcium-bound state has been shown to stimulate mammalian rod outer segment membrane guanylate cyclase. A possible site for cyclase activity based on the three-dimensional structure is discussed.
-
-	Crystal structure of recombinant bovine neurocalcin.,Vijay-Kumar S, Kumar VD Nat Struct Biol. 1999 Jan;6(1):80-8. PMID:9886296<ref>PMID:9886296</ref>
-
-	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	</div>
-	<div class="pdbe-citations 1bjf" style="background-color:#fffaf0;"></div>
-	== References ==
-	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Bos taurus]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Kumar~~, V D~~]]	+	[[Category: Kumar VD]]
-	[[Category: Vijay-Kumar, S]]	+	[[Category: Vijay-Kumar S]]
-	~~[[Category: Calcium-binding]]~~	+
-	~~[[Category: Myristoylation]]~~	+
-	~~[[Category: Neuronal specific guanylate cyclase activator~~]]	+

OCA at 06:59, 24 February 2021

OCA — Wed, 24 Feb 2021 06:59:57 GMT

←Older revision		Revision as of 06:59, 24 February 2021
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	<StructureSection load='1bjf' size='340' side='right'caption='[[1bjf]], [[Resolution\|resolution]] 2.40Å' scene=''>		<StructureSection load='1bjf' size='340' side='right'caption='[[1bjf]], [[Resolution\|resolution]] 2.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1bjf]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BJF OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1BJF FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1bjf]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BJF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BJF FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1bjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bjf OCA], [~~http~~://pdbe.org/1bjf PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1bjf RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1bjf PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1bjf ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bjf OCA], [https://pdbe.org/1bjf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bjf RCSB], [https://www.ebi.ac.uk/pdbsum/1bjf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bjf ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/NCALD_BOVIN NCALD_BOVIN]] May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions.	+	[[https://www.uniprot.org/uniprot/NCALD_BOVIN NCALD_BOVIN]] May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 09:29, 21 May 2019

OCA — Tue, 21 May 2019 09:29:40 GMT

←Older revision		Revision as of 09:29, 21 May 2019
Line 1:		Line 1:

	==CRYSTAL STRUCTURE OF RECOMBINANT BOVINE NEUROCALCIN DELTA AT 2.4 ANGSTROMS==		==CRYSTAL STRUCTURE OF RECOMBINANT BOVINE NEUROCALCIN DELTA AT 2.4 ANGSTROMS==
-	<StructureSection load='1bjf' size='340' side='right' caption='[[1bjf]], [[Resolution\|resolution]] 2.40Å' scene=''>	+	<StructureSection load='1bjf' size='340' side='right'caption='[[1bjf]], [[Resolution\|resolution]] 2.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1bjf]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BJF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1BJF FirstGlance]. <br>		<table><tr><td colspan='2'>[[1bjf]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BJF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1BJF FirstGlance]. <br>
Line 13:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bj/1bjf_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bj/1bjf_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 32:		Line 32:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Kumar, V D]]		[[Category: Kumar, V D]]
	[[Category: Vijay-Kumar, S]]		[[Category: Vijay-Kumar, S]]

OCA at 06:18, 17 August 2017

OCA — Thu, 17 Aug 2017 06:18:25 GMT

←Older revision		Revision as of 06:18, 17 August 2017
Line 1:		Line 1:
		+
	==CRYSTAL STRUCTURE OF RECOMBINANT BOVINE NEUROCALCIN DELTA AT 2.4 ANGSTROMS==		==CRYSTAL STRUCTURE OF RECOMBINANT BOVINE NEUROCALCIN DELTA AT 2.4 ANGSTROMS==
	<StructureSection load='1bjf' size='340' side='right' caption='[[1bjf]], [[Resolution\|resolution]] 2.40Å' scene=''>		<StructureSection load='1bjf' size='340' side='right' caption='[[1bjf]], [[Resolution\|resolution]] 2.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1bjf]] is a 2 chain structure ~~with sequence from [http://en.wikipedia.org/wiki/Bovin Bovin]~~. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BJF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1BJF FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1bjf]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BJF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1BJF FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1bjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bjf OCA], [http://pdbe.org/1bjf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1bjf RCSB], [http://www.ebi.ac.uk/pdbsum/1bjf PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1bjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bjf OCA], [http://pdbe.org/1bjf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1bjf RCSB], [http://www.ebi.ac.uk/pdbsum/1bjf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1bjf ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 16:		Line 17:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1bjf ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 31:		Line 32:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Bovin]]
	[[Category: Kumar, V D]]		[[Category: Kumar, V D]]
	[[Category: Vijay-Kumar, S]]		[[Category: Vijay-Kumar, S]]

OCA at 22:44, 11 September 2015

OCA — Fri, 11 Sep 2015 22:44:06 GMT

←Older revision		Revision as of 22:44, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='1bjf' size='340' side='right' caption='[[1bjf]], [[Resolution\|resolution]] 2.40Å' scene=''>		<StructureSection load='1bjf' size='340' side='right' caption='[[1bjf]], [[Resolution\|resolution]] 2.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1bjf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Bos_taurus Bos taurus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BJF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1BJF FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1bjf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bovin Bovin]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BJF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1BJF FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1bjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bjf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1bjf RCSB], [http://www.ebi.ac.uk/pdbsum/1bjf PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1bjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bjf OCA], [http://pdbe.org/1bjf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1bjf RCSB], [http://www.ebi.ac.uk/pdbsum/1bjf PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 26:		Line 26:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1bjf" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bos taurus~~]]	+	[[Category: Bovin]]
	[[Category: Kumar, V D]]		[[Category: Kumar, V D]]
	[[Category: Vijay-Kumar, S]]		[[Category: Vijay-Kumar, S]]

OCA at 20:26, 25 December 2014

OCA — Thu, 25 Dec 2014 20:26:11 GMT

←Older revision		Revision as of 20:26, 25 December 2014
Line 6:		Line 6:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1bjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bjf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1bjf RCSB], [http://www.ebi.ac.uk/pdbsum/1bjf PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1bjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bjf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1bjf RCSB], [http://www.ebi.ac.uk/pdbsum/1bjf PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/NCALD_BOVIN NCALD_BOVIN]] May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 11:21, 22 December 2014

OCA — Mon, 22 Dec 2014 11:21:31 GMT

←Older revision		Revision as of 11:21, 22 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1bjf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BJF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1BJF FirstGlance]. <br>		<table><tr><td colspan='2'>[[1bjf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BJF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1BJF FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1bjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bjf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1bjf RCSB], [http://www.ebi.ac.uk/pdbsum/1bjf PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1bjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bjf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1bjf RCSB], [http://www.ebi.ac.uk/pdbsum/1bjf PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 29:		Line 29:
	</StructureSection>		</StructureSection>
	[[Category: Bos taurus]]		[[Category: Bos taurus]]
-	[[Category: Kumar, V D.]]	+	[[Category: Kumar, V D]]
-	[[Category: Vijay-Kumar, S.]]	+	[[Category: Vijay-Kumar, S]]
	[[Category: Calcium-binding]]		[[Category: Calcium-binding]]
	[[Category: Myristoylation]]		[[Category: Myristoylation]]
	[[Category: Neuronal specific guanylate cyclase activator]]		[[Category: Neuronal specific guanylate cyclase activator]]

OCA at 09:49, 13 August 2014

OCA — Wed, 13 Aug 2014 09:49:11 GMT

←Older revision		Revision as of 09:49, 13 August 2014
Line 1:		Line 1:
-	[[~~Image~~:1bjf.~~png\|left~~\|200px]]	+	==CRYSTAL STRUCTURE OF RECOMBINANT BOVINE NEUROCALCIN DELTA AT 2.4 ANGSTROMS==
		+	<StructureSection load='1bjf' size='340' side='right' caption='[[1bjf]], [[Resolution\|resolution]] 2.40Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1bjf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BJF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1BJF FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene><br>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1bjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bjf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1bjf RCSB], [http://www.ebi.ac.uk/pdbsum/1bjf PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bj/1bjf_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The crystal structure of calcium-bound unmyristoylated bovine neurocalcin from Escherichia coli has been determined at 2.4 A resolution. The three-dimensional structure reveals a highly compact structure consisting of: (i) two pairs of calcium-binding EF-hands (EF1-EF2 and EF3-EF4); (ii) a calcium ion bound at EF2, EF3 and EF4 sites; and (iii) an EF1-hand that is disabled from calcium-binding due to a Cys-Pro sequence in the Ca2+-binding loop. The crystal structure of neurocalcin resembles photoreceptor recoverin in overall topology, however its EF2- and EF4-hands differ. Recently, neurocalcin in the calcium-bound state has been shown to stimulate mammalian rod outer segment membrane guanylate cyclase. A possible site for cyclase activity based on the three-dimensional structure is discussed.

-	~~{{STRUCTURE_1bjf\| PDB=1bjf \| SCENE= }}~~	+	Crystal structure of recombinant bovine neurocalcin.,Vijay-Kumar S, Kumar VD Nat Struct Biol. 1999 Jan;6(1):80-8. PMID:9886296<ref>PMID:9886296</ref>

-	~~===CRYSTAL STRUCTURE OF RECOMBINANT BOVINE NEUROCALCIN DELTA AT 2.4 ANGSTROMS===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_9886296}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[1bjf]] is~~ a ~~2 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Bos_taurus Bos taurus]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=1BJF OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:009886296<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Bos taurus]]		[[Category: Bos taurus]]
	[[Category: Kumar, V D.]]		[[Category: Kumar, V D.]]

OCA: Protected "1bjf" [edit=sysop:move=sysop]

OCA — Sun, 21 Oct 2012 20:55:48 GMT

Protected "1bjf" [edit=sysop:move=sysop]

←Older revision

Revision as of 20:55, 21 October 2012

OCA at 20:55, 21 October 2012

OCA — Sun, 21 Oct 2012 20:55:44 GMT

←Older revision		Revision as of 20:55, 21 October 2012
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-	{{Seed}}
	[[Image:1bjf.png\|left\|200px]]		[[Image:1bjf.png\|left\|200px]]

-	<!--
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	{{STRUCTURE_1bjf\| PDB=1bjf \| SCENE= }}		{{STRUCTURE_1bjf\| PDB=1bjf \| SCENE= }}

	===CRYSTAL STRUCTURE OF RECOMBINANT BOVINE NEUROCALCIN DELTA AT 2.4 ANGSTROMS===		===CRYSTAL STRUCTURE OF RECOMBINANT BOVINE NEUROCALCIN DELTA AT 2.4 ANGSTROMS===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_9886296}}, adds the Publication Abstract to the page
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	{{ABSTRACT_PUBMED_9886296}}		{{ABSTRACT_PUBMED_9886296}}

	==About this Structure==		==About this Structure==
-	~~1BJF~~ is a 2 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/~~Escherichia_coli Escherichia coli~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BJF OCA].	+	[[1bjf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BJF OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~9886296~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:009886296</ref><references group="xtra"/>
-	[[Category: ~~Escherichia coli~~]]	+	[[Category: Bos taurus]]
	[[Category: Kumar, V D.]]		[[Category: Kumar, V D.]]
	[[Category: Vijay-Kumar, S.]]		[[Category: Vijay-Kumar, S.]]
Line 30:		Line 18:
	[[Category: Myristoylation]]		[[Category: Myristoylation]]
	[[Category: Neuronal specific guanylate cyclase activator]]		[[Category: Neuronal specific guanylate cyclase activator]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 06:11:42 2009''