1bq5 - Revision history

OCA at 06:38, 7 February 2024

OCA — Wed, 07 Feb 2024 06:38:21 GMT

←Older revision		Revision as of 06:38, 7 February 2024
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1bq5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Achromobacter_xylosoxidans Achromobacter xylosoxidans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BQ5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BQ5 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1bq5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Achromobacter_xylosoxidans Achromobacter xylosoxidans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BQ5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BQ5 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.05Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bq5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bq5 OCA], [https://pdbe.org/1bq5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bq5 RCSB], [https://www.ebi.ac.uk/pdbsum/1bq5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bq5 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bq5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bq5 OCA], [https://pdbe.org/1bq5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bq5 RCSB], [https://www.ebi.ac.uk/pdbsum/1bq5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bq5 ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/O68601_ALCXX O68601_ALCXX]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1bq5 ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1bq5 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
-	<div style="background-color:#fffaf0;">
-	== Publication Abstract from PubMed ==
-	The crystal structure of the blue nitrite reductase from Alcaligenes xylosoxidans GIFU 1051 (AxgNIR) has been determined at 2.05 A resolution. AxgNIR contains both type 1 and 2 Cu sites, the geometry of the former being distorted tetrahedral. The superpositioning of the type 1 Cu sites in the blue enzyme and a green nitrite reductase revealed that the orientation of the Met150 side chain differed. The deviation of the Sdelta(Met150) atom from the axial position of the NNS plane formed by two Ndelta(His95 and His145) and one Sgamma(Cys136) atom caused the difference in the colors of the enzymes, i.e. blue and green.
-
-	Type 1 Cu structure of blue nitrite reductase from Alcaligenes xylosoxidans GIFU 1051 at 2.05 A resolution: comparison of blue and green nitrite reductases.,Inoue T, Gotowda M, Deligeer, Kataoka K, Yamaguchi K, Suzuki S, Watanabe H, Gohow M, Kai Y J Biochem. 1998 Nov;124(5):876-9. PMID:9792907<ref>PMID:9792907</ref>
-
-	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	</div>
-	<div class="pdbe-citations 1bq5" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
	*[[Nitrite reductase 3D structures\|Nitrite reductase 3D structures]]		*[[Nitrite reductase 3D structures\|Nitrite reductase 3D structures]]
-	== References ==
-	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
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	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Deligeer]]		[[Category: Deligeer]]
-	[[Category: Goho, M]]	+	[[Category: Goho M]]
-	[[Category: Gotowda, M]]	+	[[Category: Gotowda M]]
-	[[Category: Inoue, T]]	+	[[Category: Inoue T]]
-	[[Category: Kataoka, K]]	+	[[Category: Kataoka K]]
-	[[Category: Suzuki, S]]	+	[[Category: Suzuki S]]
-	[[Category: Watanabe, H]]	+	[[Category: Watanabe H]]
-	[[Category: Yamaguchi, K]]	+	[[Category: Yamaguchi K]]
-	[[Category: Yasushi~~, K A.I]]~~	+	[[Category: Yasushi KAI]]
-	~~[[Category: Cuproprotein]]~~	+
-	~~[[Category: Nitrite reductase]]~~	+
-	~~[[Category: Oxidoreductase~~]]	+

OCA at 10:28, 14 July 2021

OCA — Wed, 14 Jul 2021 10:28:07 GMT

←Older revision		Revision as of 10:28, 14 July 2021
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	<StructureSection load='1bq5' size='340' side='right'caption='[[1bq5]], [[Resolution\|resolution]] 2.05Å' scene=''>		<StructureSection load='1bq5' size='340' side='right'caption='[[1bq5]], [[Resolution\|resolution]] 2.05Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1bq5]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Achromobacter_xylosoxidans Achromobacter xylosoxidans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BQ5 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1BQ5 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1bq5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Achromobacter_xylosoxidans Achromobacter xylosoxidans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BQ5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BQ5 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1bq5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bq5 OCA], [~~http~~://pdbe.org/1bq5 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1bq5 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1bq5 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1bq5 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bq5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bq5 OCA], [https://pdbe.org/1bq5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bq5 RCSB], [https://www.ebi.ac.uk/pdbsum/1bq5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bq5 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 28:		Line 28:

	==See Also==		==See Also==
-	*[[Nitrite reductase\|Nitrite reductase]]	+	*[[Nitrite reductase 3D structures\|Nitrite reductase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 07:26, 10 October 2019

OCA — Thu, 10 Oct 2019 07:26:30 GMT

←Older revision		Revision as of 07:26, 10 October 2019
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	==NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS GIFU 1051==		==NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS GIFU 1051==
-	<StructureSection load='1bq5' size='340' side='right' caption='[[1bq5]], [[Resolution\|resolution]] 2.05Å' scene=''>	+	<StructureSection load='1bq5' size='340' side='right'caption='[[1bq5]], [[Resolution\|resolution]] 2.05Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1bq5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Achromobacter_xylosoxidans Achromobacter xylosoxidans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BQ5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1BQ5 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1bq5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Achromobacter_xylosoxidans Achromobacter xylosoxidans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BQ5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1BQ5 FirstGlance]. <br>
Line 11:		Line 11:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bq/1bq5_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bq/1bq5_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 26:		Line 26:
	</div>		</div>
	<div class="pdbe-citations 1bq5" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 1bq5" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Nitrite reductase\|Nitrite reductase]]
	== References ==		== References ==
	<references/>		<references/>
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	</StructureSection>		</StructureSection>
	[[Category: Achromobacter xylosoxidans]]		[[Category: Achromobacter xylosoxidans]]
		+	[[Category: Large Structures]]
	[[Category: Deligeer]]		[[Category: Deligeer]]
	[[Category: Goho, M]]		[[Category: Goho, M]]

OCA at 08:17, 29 November 2017

OCA — Wed, 29 Nov 2017 08:17:40 GMT

←Older revision		Revision as of 08:17, 29 November 2017
Line 1:		Line 1:
		+
	==NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS GIFU 1051==		==NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS GIFU 1051==
	<StructureSection load='1bq5' size='340' side='right' caption='[[1bq5]], [[Resolution\|resolution]] 2.05Å' scene=''>		<StructureSection load='1bq5' size='340' side='right' caption='[[1bq5]], [[Resolution\|resolution]] 2.05Å' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[1bq5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Achromobacter_xylosoxidans Achromobacter xylosoxidans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BQ5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1BQ5 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1bq5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Achromobacter_xylosoxidans Achromobacter xylosoxidans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BQ5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1BQ5 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1bq5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bq5 OCA], [http://pdbe.org/1bq5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1bq5 RCSB], [http://www.ebi.ac.uk/pdbsum/1bq5 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1bq5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bq5 OCA], [http://pdbe.org/1bq5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1bq5 RCSB], [http://www.ebi.ac.uk/pdbsum/1bq5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1bq5 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	</div>		</div>
	<div class="pdbe-citations 1bq5" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 1bq5" style="background-color:#fffaf0;"></div>
-
-	==See Also==
-	*[[Nitric reductase\|Nitric reductase]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 06:56, 9 February 2016

OCA — Tue, 09 Feb 2016 06:56:44 GMT

←Older revision		Revision as of 06:56, 9 February 2016
Line 14:		Line 14:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1bq5 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 19:43, 10 September 2015

OCA — Thu, 10 Sep 2015 19:43:38 GMT

←Older revision		Revision as of 19:43, 10 September 2015
Line 4:		Line 4:
	<table><tr><td colspan='2'>[[1bq5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Achromobacter_xylosoxidans Achromobacter xylosoxidans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BQ5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1BQ5 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1bq5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Achromobacter_xylosoxidans Achromobacter xylosoxidans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BQ5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1BQ5 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1bq5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bq5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1bq5 RCSB], [http://www.ebi.ac.uk/pdbsum/1bq5 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1bq5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bq5 OCA], [http://pdbe.org/1bq5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1bq5 RCSB], [http://www.ebi.ac.uk/pdbsum/1bq5 PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 24:		Line 24:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1bq5" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==

OCA at 09:21, 22 December 2014

OCA — Mon, 22 Dec 2014 09:21:30 GMT

←Older revision		Revision as of 09:21, 22 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1bq5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Achromobacter_xylosoxidans Achromobacter xylosoxidans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BQ5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1BQ5 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1bq5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Achromobacter_xylosoxidans Achromobacter xylosoxidans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BQ5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1BQ5 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1bq5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bq5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1bq5 RCSB], [http://www.ebi.ac.uk/pdbsum/1bq5 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1bq5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bq5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1bq5 RCSB], [http://www.ebi.ac.uk/pdbsum/1bq5 PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	[[Category: Achromobacter xylosoxidans]]		[[Category: Achromobacter xylosoxidans]]
	[[Category: Deligeer]]		[[Category: Deligeer]]
-	[[Category: Goho, M.]]	+	[[Category: Goho, M]]
-	[[Category: Gotowda, M.]]	+	[[Category: Gotowda, M]]
-	[[Category: Inoue, T.]]	+	[[Category: Inoue, T]]
-	[[Category: Kataoka, K.]]	+	[[Category: Kataoka, K]]
-	[[Category: Suzuki, S.]]	+	[[Category: Suzuki, S]]
-	[[Category: Watanabe, H.]]	+	[[Category: Watanabe, H]]
-	[[Category: Yamaguchi, K.]]	+	[[Category: Yamaguchi, K]]
-	[[Category: Yasushi, K A.I.]]	+	[[Category: Yasushi, K A.I]]
	[[Category: Cuproprotein]]		[[Category: Cuproprotein]]
	[[Category: Nitrite reductase]]		[[Category: Nitrite reductase]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]

OCA at 09:46, 13 August 2014

OCA — Wed, 13 Aug 2014 09:46:57 GMT

←Older revision		Revision as of 09:46, 13 August 2014
Line 1:		Line 1:
-	[[~~Image~~:1bq5.~~png\|left~~\|200px]]	+	==NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS GIFU 1051==
		+	<StructureSection load='1bq5' size='340' side='right' caption='[[1bq5]], [[Resolution\|resolution]] 2.05Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1bq5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Achromobacter_xylosoxidans Achromobacter xylosoxidans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BQ5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1BQ5 FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene><br>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1bq5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bq5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1bq5 RCSB], [http://www.ebi.ac.uk/pdbsum/1bq5 PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bq/1bq5_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The crystal structure of the blue nitrite reductase from Alcaligenes xylosoxidans GIFU 1051 (AxgNIR) has been determined at 2.05 A resolution. AxgNIR contains both type 1 and 2 Cu sites, the geometry of the former being distorted tetrahedral. The superpositioning of the type 1 Cu sites in the blue enzyme and a green nitrite reductase revealed that the orientation of the Met150 side chain differed. The deviation of the Sdelta(Met150) atom from the axial position of the NNS plane formed by two Ndelta(His95 and His145) and one Sgamma(Cys136) atom caused the difference in the colors of the enzymes, i.e. blue and green.

-	~~{{STRUCTURE_1bq5\| PDB=1bq5 \| SCENE= }}~~	+	Type 1 Cu structure of blue nitrite reductase from Alcaligenes xylosoxidans GIFU 1051 at 2.05 A resolution: comparison of blue and green nitrite reductases.,Inoue T, Gotowda M, Deligeer, Kataoka K, Yamaguchi K, Suzuki S, Watanabe H, Gohow M, Kai Y J Biochem. 1998 Nov;124(5):876-9. PMID:9792907<ref>PMID:9792907</ref>

-	~~===NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS GIFU 1051===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_9792907}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[1bq5]] is~~ a ~~1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Achromobacter_xylosoxidans Achromobacter xylosoxidans]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=1BQ5 OCA].~~	+

	==See Also==		==See Also==
	*[[Nitric reductase\|Nitric reductase]]		*[[Nitric reductase\|Nitric reductase]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	<~~ref group="xtra">PMID:009792907<~~/~~ref~~><~~references group="xtra"~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Achromobacter xylosoxidans]]		[[Category: Achromobacter xylosoxidans]]
	[[Category: Deligeer]]		[[Category: Deligeer]]

OCA at 13:02, 20 October 2012

OCA — Sat, 20 Oct 2012 13:02:13 GMT

←Older revision		Revision as of 13:02, 20 October 2012
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	==About this Structure==		==About this Structure==
-	[[1bq5]] is a 1 chain structure ~~of [[Nitric reductase]]~~ with sequence from [http://en.wikipedia.org/wiki/Achromobacter_xylosoxidans Achromobacter xylosoxidans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BQ5 OCA].	+	[[1bq5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Achromobacter_xylosoxidans Achromobacter xylosoxidans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BQ5 OCA].

	==See Also==		==See Also==

OCA: Protected "1bq5" [edit=sysop:move=sysop]

OCA — Thu, 26 Jul 2012 10:42:20 GMT

Protected "1bq5" [edit=sysop:move=sysop]

←Older revision

Revision as of 10:42, 26 July 2012