1d24 - Revision history

OCA at 06:48, 7 February 2024

OCA — Wed, 07 Feb 2024 06:48:14 GMT

←Older revision		Revision as of 06:48, 7 February 2024
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1d24]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D24 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D24 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1d24]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D24 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D24 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6OG:6-O-METHYL+GUANOSINE-5-MONOPHOSPHATE'>6OG</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.9Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6OG:6-O-METHYL+GUANOSINE-5-MONOPHOSPHATE'>6OG</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1d24 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d24 OCA], [https://pdbe.org/1d24 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1d24 RCSB], [https://www.ebi.ac.uk/pdbsum/1d24 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d24 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1d24 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d24 OCA], [https://pdbe.org/1d24 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1d24 RCSB], [https://www.ebi.ac.uk/pdbsum/1d24 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d24 ProSAT]</span></td></tr>
	</table>		</table>
-	<div style="background-color:#fffaf0;">
-	== Publication Abstract from PubMed ==
-	The crystal and molecular structure of the first DNA duplex containing the carcinogenic lesion O6MeG has been determined to a resolution of 1.9 A and refined to an R factor of 19%. (d[CGC-(O6Me)GCG])2 crystallizes in the left-handed Z DNA form and has crystal parameters and conformational features similar to those of the parent sequence [d(CG)3]2. The methyl groups on O6 of G4 and G10 have C5-C6-O6-O6Me torsion angles of 73 degrees and 56 degrees, respectively, and protrude onto the major groove surface. The base-pairing conformation for the methylated G.C base pairs is of the Watson-Crick type as opposed to a wobble-type conformation that had been proposed in a B DNA fragment. As in other Z DNA structures, a spine of hydration is seen in the minor groove.
-
-	Crystal and molecular structure of a DNA duplex containing the carcinogenic lesion O6-methylguanine.,Ginell SL, Kuzmich S, Jones RA, Berman HM Biochemistry. 1990 Nov 20;29(46):10461-5. PMID:2271657<ref>PMID:2271657</ref>
-
-	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	</div>
-	<div class="pdbe-citations 1d24" style="background-color:#fffaf0;"></div>
-	== References ==
-	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 08:48, 7 December 2022

OCA — Wed, 07 Dec 2022 08:48:44 GMT

←Older revision		Revision as of 08:48, 7 December 2022
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1d24]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D24 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D24 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1d24]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D24 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D24 FirstGlance]. <br>
-	</td></tr><tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=6OG:6-O-METHYL+GUANOSINE-5-MONOPHOSPHATE'>6OG</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6OG:6-O-METHYL+GUANOSINE-5-MONOPHOSPHATE'>6OG</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1d24 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d24 OCA], [https://pdbe.org/1d24 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1d24 RCSB], [https://www.ebi.ac.uk/pdbsum/1d24 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d24 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1d24 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d24 OCA], [https://pdbe.org/1d24 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1d24 RCSB], [https://www.ebi.ac.uk/pdbsum/1d24 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d24 ProSAT]</span></td></tr>
	</table>		</table>
Line 21:		Line 21:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Berman~~, H M~~]]	+	[[Category: Berman HM]]
-	[[Category: Ginell~~, S L~~]]	+	[[Category: Ginell SL]]
-	[[Category: Jones~~, R A~~]]	+	[[Category: Jones RA]]
-	[[Category: Kuzmich, S]]	+	[[Category: Kuzmich S]]
-	~~[[Category: Dna]]~~	+
-	~~[[Category: Double helix]]~~	+
-	~~[[Category: Modified]]~~	+
-	~~[[Category: Z-dna~~]]	+

OCA at 15:21, 3 March 2021

OCA — Wed, 03 Mar 2021 15:21:25 GMT

←Older revision		Revision as of 15:21, 3 March 2021
Line 3:		Line 3:
	<StructureSection load='1d24' size='340' side='right'caption='[[1d24]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='1d24' size='340' side='right'caption='[[1d24]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1d24]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D24 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1D24 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1d24]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D24 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D24 FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=6OG:6-O-METHYL+GUANOSINE-5-MONOPHOSPHATE'>6OG</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=6OG:6-O-METHYL+GUANOSINE-5-MONOPHOSPHATE'>6OG</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1d24 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d24 OCA], [~~http~~://pdbe.org/1d24 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1d24 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1d24 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1d24 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1d24 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d24 OCA], [https://pdbe.org/1d24 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1d24 RCSB], [https://www.ebi.ac.uk/pdbsum/1d24 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d24 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 07:16, 29 May 2019

OCA — Wed, 29 May 2019 07:16:24 GMT

←Older revision		Revision as of 07:16, 29 May 2019
Line 1:		Line 1:

	==CRYSTAL AND MOLECULAR STRUCTURE OF A DNA DUPLEX CONTAINING THE CARCINOGENIC LESION O6-METHYLGUANINE==		==CRYSTAL AND MOLECULAR STRUCTURE OF A DNA DUPLEX CONTAINING THE CARCINOGENIC LESION O6-METHYLGUANINE==
-	<StructureSection load='1d24' size='340' side='right' caption='[[1d24]], [[Resolution\|resolution]] 1.90Å' scene=''>	+	<StructureSection load='1d24' size='340' side='right'caption='[[1d24]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1d24]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D24 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1D24 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1d24]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D24 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1D24 FirstGlance]. <br>
Line 20:		Line 20:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Berman, H M]]		[[Category: Berman, H M]]
	[[Category: Ginell, S L]]		[[Category: Ginell, S L]]

OCA at 11:23, 24 August 2017

OCA — Thu, 24 Aug 2017 11:23:07 GMT

←Older revision		Revision as of 11:23, 24 August 2017
Line 1:		Line 1:
		+
	==CRYSTAL AND MOLECULAR STRUCTURE OF A DNA DUPLEX CONTAINING THE CARCINOGENIC LESION O6-METHYLGUANINE==		==CRYSTAL AND MOLECULAR STRUCTURE OF A DNA DUPLEX CONTAINING THE CARCINOGENIC LESION O6-METHYLGUANINE==
	<StructureSection load='1d24' size='340' side='right' caption='[[1d24]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='1d24' size='340' side='right' caption='[[1d24]], [[Resolution\|resolution]] 1.90Å' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[1d24]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D24 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1D24 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1d24]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D24 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1D24 FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=6OG:6-O-METHYL+GUANOSINE-5-MONOPHOSPHATE'>6OG</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=6OG:6-O-METHYL+GUANOSINE-5-MONOPHOSPHATE'>6OG</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1d24 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d24 OCA], [http://pdbe.org/1d24 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1d24 RCSB], [http://www.ebi.ac.uk/pdbsum/1d24 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1d24 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d24 OCA], [http://pdbe.org/1d24 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1d24 RCSB], [http://www.ebi.ac.uk/pdbsum/1d24 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1d24 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 21:49, 10 September 2015

OCA — Thu, 10 Sep 2015 21:49:30 GMT

←Older revision		Revision as of 21:49, 10 September 2015
Line 4:		Line 4:
	<table><tr><td colspan='2'>[[1d24]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D24 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1D24 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1d24]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D24 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1D24 FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=6OG:6-O-METHYL+GUANOSINE-5-MONOPHOSPHATE'>6OG</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=6OG:6-O-METHYL+GUANOSINE-5-MONOPHOSPHATE'>6OG</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1d24 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d24 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1d24 RCSB], [http://www.ebi.ac.uk/pdbsum/1d24 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1d24 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d24 OCA], [http://pdbe.org/1d24 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1d24 RCSB], [http://www.ebi.ac.uk/pdbsum/1d24 PDBsum]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 14:		Line 14:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1d24" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 00:26, 23 December 2014

OCA — Tue, 23 Dec 2014 00:26:57 GMT

←Older revision		Revision as of 00:26, 23 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1d24]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D24 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1D24 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1d24]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D24 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1D24 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=6OG:6-O-METHYL+GUANOSINE-5-MONOPHOSPHATE'>6OG</scene></td></tr>	+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=6OG:6-O-METHYL+GUANOSINE-5-MONOPHOSPHATE'>6OG</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1d24 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d24 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1d24 RCSB], [http://www.ebi.ac.uk/pdbsum/1d24 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1d24 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d24 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1d24 RCSB], [http://www.ebi.ac.uk/pdbsum/1d24 PDBsum]</span></td></tr>
-	<table>	+	</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 18:		Line 18:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Berman, H M.]]	+	[[Category: Berman, H M]]
-	[[Category: Ginell, S L.]]	+	[[Category: Ginell, S L]]
-	[[Category: Jones, R A.]]	+	[[Category: Jones, R A]]
-	[[Category: Kuzmich, S.]]	+	[[Category: Kuzmich, S]]
	[[Category: Dna]]		[[Category: Dna]]
	[[Category: Double helix]]		[[Category: Double helix]]
	[[Category: Modified]]		[[Category: Modified]]
	[[Category: Z-dna]]		[[Category: Z-dna]]

OCA at 09:27, 27 August 2014

OCA — Wed, 27 Aug 2014 09:27:58 GMT

←Older revision		Revision as of 09:27, 27 August 2014
Line 1:		Line 1:
-	[[~~Image:~~1d24.~~png~~\|~~left\|200px~~]]	+	==CRYSTAL AND MOLECULAR STRUCTURE OF A DNA DUPLEX CONTAINING THE CARCINOGENIC LESION O6-METHYLGUANINE==
		+	<StructureSection load='1d24' size='340' side='right' caption='[[1d24]], [[Resolution\|resolution]] 1.90Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1d24]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D24 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1D24 FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=6OG:6-O-METHYL+GUANOSINE-5-MONOPHOSPHATE'>6OG</scene></td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1d24 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d24 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1d24 RCSB], [http://www.ebi.ac.uk/pdbsum/1d24 PDBsum]</span></td></tr>
		+	<table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The crystal and molecular structure of the first DNA duplex containing the carcinogenic lesion O6MeG has been determined to a resolution of 1.9 A and refined to an R factor of 19%. (d[CGC-(O6Me)GCG])2 crystallizes in the left-handed Z DNA form and has crystal parameters and conformational features similar to those of the parent sequence [d(CG)3]2. The methyl groups on O6 of G4 and G10 have C5-C6-O6-O6Me torsion angles of 73 degrees and 56 degrees, respectively, and protrude onto the major groove surface. The base-pairing conformation for the methylated G.C base pairs is of the Watson-Crick type as opposed to a wobble-type conformation that had been proposed in a B DNA fragment. As in other Z DNA structures, a spine of hydration is seen in the minor groove.

-	~~{{STRUCTURE_1d24\| PDB=1d24 \| SCENE= }}~~	+	Crystal and molecular structure of a DNA duplex containing the carcinogenic lesion O6-methylguanine.,Ginell SL, Kuzmich S, Jones RA, Berman HM Biochemistry. 1990 Nov 20;29(46):10461-5. PMID:2271657<ref>PMID:2271657</ref>

-	~~===CRYSTAL AND MOLECULAR STRUCTURE OF A DNA DUPLEX CONTAINING THE CARCINOGENIC LESION O6-METHYLGUANINE===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_2271657}}~~	+	== References ==
-		+	<references/>
-	==~~About this Structure~~==	+	__TOC__
-	~~[[1d24]] is a 2 chain structure. Full crystallographic information is available from [http:~~//~~oca.weizmann.ac.il/oca-bin/ocashort?id=1D24 OCA].~~	+	</StructureSection>
	[[Category: Berman, H M.]]		[[Category: Berman, H M.]]
	[[Category: Ginell, S L.]]		[[Category: Ginell, S L.]]

OCA: Protected "1d24" [edit=sysop:move=sysop]

OCA — Sun, 21 Oct 2012 20:24:45 GMT

Protected "1d24" [edit=sysop:move=sysop]

←Older revision

Revision as of 20:24, 21 October 2012

OCA at 20:24, 21 October 2012

OCA — Sun, 21 Oct 2012 20:24:40 GMT

←Older revision		Revision as of 20:24, 21 October 2012
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-	{{Seed}}
	[[Image:1d24.png\|left\|200px]]		[[Image:1d24.png\|left\|200px]]

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	{{STRUCTURE_1d24\| PDB=1d24 \| SCENE= }}		{{STRUCTURE_1d24\| PDB=1d24 \| SCENE= }}

	===CRYSTAL AND MOLECULAR STRUCTURE OF A DNA DUPLEX CONTAINING THE CARCINOGENIC LESION O6-METHYLGUANINE===		===CRYSTAL AND MOLECULAR STRUCTURE OF A DNA DUPLEX CONTAINING THE CARCINOGENIC LESION O6-METHYLGUANINE===

-
-	<!--
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	{{ABSTRACT_PUBMED_2271657}}		{{ABSTRACT_PUBMED_2271657}}

	==About this Structure==		==About this Structure==
-	Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D24 OCA].	+	[[1d24]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D24 OCA].
-		+
-	~~==Reference==~~	+
-	Crystal and molecular structure of a DNA duplex containing the carcinogenic lesion O6-methylguanine., Ginell SL, Kuzmich S, Jones RA, Berman HM, Biochemistry. 1990 Nov 20;29(46):10461-5. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/2271657 2271657]	+
	[[Category: Berman, H M.]]		[[Category: Berman, H M.]]
	[[Category: Ginell, S L.]]		[[Category: Ginell, S L.]]
	[[Category: Jones, R A.]]		[[Category: Jones, R A.]]
	[[Category: Kuzmich, S.]]		[[Category: Kuzmich, S.]]
		+	[[Category: Dna]]
	[[Category: Double helix]]		[[Category: Double helix]]
	[[Category: Modified]]		[[Category: Modified]]
	[[Category: Z-dna]]		[[Category: Z-dna]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 22:09:55 2008''