1de2 - Revision history

OCA at 09:49, 20 March 2024

OCA — Wed, 20 Mar 2024 09:49:44 GMT

←Older revision		Revision as of 09:49, 20 March 2024
Line 1:		Line 1:

	==NMR STRUCTURES OF REDUCED BACTERIOPHAGE T4 GLUTAREDOXIN==		==NMR STRUCTURES OF REDUCED BACTERIOPHAGE T4 GLUTAREDOXIN==
-	<StructureSection load='1de2' size='340' side='right'caption='[[1de2~~]], [[NMR_Ensembles_of_Models \| 30 NMR models~~]]' scene=''>	+	<StructureSection load='1de2' size='340' side='right'caption='[[1de2]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1de2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Enterobacteria_phage_t4 Enterobacteria phage t4~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DE2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DE2 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1de2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_T4 Escherichia virus T4]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DE2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DE2 FirstGlance]. <br>
-	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~><div style~~=~~'overflow: auto; max-height: 3em;'>[[1de1\|1de1]]</div~~></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1de2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1de2 OCA], [https://pdbe.org/1de2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1de2 RCSB], [https://www.ebi.ac.uk/pdbsum/1de2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1de2 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1de2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1de2 OCA], [https://pdbe.org/1de2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1de2 RCSB], [https://www.ebi.ac.uk/pdbsum/1de2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1de2 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/GLRX_BPT4 GLRX_BPT4]] Serves as a reducing agent for the phage-induced ribonucleotide reductase, but not for the bacterial ones. This specificity may be the result of sequence differences around the redox-active disulfide bond. The oxidized form accepts electrons from bacterial glutathione and will, in turn, reduce other small disulfides. Can also be reduced by NADPH and by bacterial thioredoxin reductase.<ref>PMID:8440680</ref>	+	[https://www.uniprot.org/uniprot/GLRX_BPT4 GLRX_BPT4] Serves as a reducing agent for the phage-induced ribonucleotide reductase, but not for the bacterial ones. This specificity may be the result of sequence differences around the redox-active disulfide bond. The oxidized form accepts electrons from bacterial glutathione and will, in turn, reduce other small disulfides. Can also be reduced by NADPH and by bacterial thioredoxin reductase.<ref>PMID:8440680</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 23:		Line 23:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Enterobacteria phage t4~~]]	+	[[Category: Escherichia virus T4]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Wang, Y]]	+	[[Category: Wang Y]]
-	[[Category: Wishart~~, D S]]~~	+	[[Category: Wishart DS]]
-	~~[[Category: Electron transport]]~~	+
-	~~[[Category: Glutaredoxin~~]]	+

OCA at 18:25, 10 March 2021

OCA — Wed, 10 Mar 2021 18:25:22 GMT

←Older revision		Revision as of 18:25, 10 March 2021
Line 3:		Line 3:
	<StructureSection load='1de2' size='340' side='right'caption='[[1de2]], [[NMR_Ensembles_of_Models \| 30 NMR models]]' scene=''>		<StructureSection load='1de2' size='340' side='right'caption='[[1de2]], [[NMR_Ensembles_of_Models \| 30 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1de2]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Enterobacteria_phage_t4 Enterobacteria phage t4]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DE2 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1DE2 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1de2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterobacteria_phage_t4 Enterobacteria phage t4]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DE2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DE2 FirstGlance]. <br>
-	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1de1\|1de1]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1de1\|1de1]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1de2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1de2 OCA], [~~http~~://pdbe.org/1de2 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1de2 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1de2 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1de2 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1de2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1de2 OCA], [https://pdbe.org/1de2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1de2 RCSB], [https://www.ebi.ac.uk/pdbsum/1de2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1de2 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/GLRX_BPT4 GLRX_BPT4]] Serves as a reducing agent for the phage-induced ribonucleotide reductase, but not for the bacterial ones. This specificity may be the result of sequence differences around the redox-active disulfide bond. The oxidized form accepts electrons from bacterial glutathione and will, in turn, reduce other small disulfides. Can also be reduced by NADPH and by bacterial thioredoxin reductase.<ref>PMID:8440680</ref>	+	[[https://www.uniprot.org/uniprot/GLRX_BPT4 GLRX_BPT4]] Serves as a reducing agent for the phage-induced ribonucleotide reductase, but not for the bacterial ones. This specificity may be the result of sequence differences around the redox-active disulfide bond. The oxidized form accepts electrons from bacterial glutathione and will, in turn, reduce other small disulfides. Can also be reduced by NADPH and by bacterial thioredoxin reductase.<ref>PMID:8440680</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 23:55, 5 June 2019

OCA — Wed, 05 Jun 2019 23:55:29 GMT

←Older revision		Revision as of 23:55, 5 June 2019
Line 1:		Line 1:

	==NMR STRUCTURES OF REDUCED BACTERIOPHAGE T4 GLUTAREDOXIN==		==NMR STRUCTURES OF REDUCED BACTERIOPHAGE T4 GLUTAREDOXIN==
-	<StructureSection load='1de2' size='340' side='right' caption='[[1de2]], [[NMR_Ensembles_of_Models \| 30 NMR models]]' scene=''>	+	<StructureSection load='1de2' size='340' side='right'caption='[[1de2]], [[NMR_Ensembles_of_Models \| 30 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1de2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_t4 Enterobacteria phage t4]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DE2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1DE2 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1de2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_t4 Enterobacteria phage t4]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DE2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1DE2 FirstGlance]. <br>
Line 13:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/de/1de2_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/de/1de2_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 24:		Line 24:
	</StructureSection>		</StructureSection>
	[[Category: Enterobacteria phage t4]]		[[Category: Enterobacteria phage t4]]
		+	[[Category: Large Structures]]
	[[Category: Wang, Y]]		[[Category: Wang, Y]]
	[[Category: Wishart, D S]]		[[Category: Wishart, D S]]
	[[Category: Electron transport]]		[[Category: Electron transport]]
	[[Category: Glutaredoxin]]		[[Category: Glutaredoxin]]

OCA at 04:20, 30 August 2017

OCA — Wed, 30 Aug 2017 04:20:37 GMT

←Older revision		Revision as of 04:20, 30 August 2017
Line 1:		Line 1:
		+
	==NMR STRUCTURES OF REDUCED BACTERIOPHAGE T4 GLUTAREDOXIN==		==NMR STRUCTURES OF REDUCED BACTERIOPHAGE T4 GLUTAREDOXIN==
	<StructureSection load='1de2' size='340' side='right' caption='[[1de2]], [[NMR_Ensembles_of_Models \| 30 NMR models]]' scene=''>		<StructureSection load='1de2' size='340' side='right' caption='[[1de2]], [[NMR_Ensembles_of_Models \| 30 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1de2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Bpt4 Bpt4~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DE2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1DE2 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1de2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_t4 Enterobacteria phage t4]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DE2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1DE2 FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1de1\|1de1]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1de1\|1de1]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1de2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1de2 OCA], [http://pdbe.org/1de2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1de2 RCSB], [http://www.ebi.ac.uk/pdbsum/1de2 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1de2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1de2 OCA], [http://pdbe.org/1de2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1de2 RCSB], [http://www.ebi.ac.uk/pdbsum/1de2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1de2 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 16:		Line 17:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1de2 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	== References ==		== References ==
Line 22:		Line 23:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bpt4~~]]	+	[[Category: Enterobacteria phage t4]]
	[[Category: Wang, Y]]		[[Category: Wang, Y]]
	[[Category: Wishart, D S]]		[[Category: Wishart, D S]]
	[[Category: Electron transport]]		[[Category: Electron transport]]
	[[Category: Glutaredoxin]]		[[Category: Glutaredoxin]]

OCA at 16:49, 11 September 2015

OCA — Fri, 11 Sep 2015 16:49:58 GMT

←Older revision		Revision as of 16:49, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='1de2' size='340' side='right' caption='[[1de2]], [[NMR_Ensembles_of_Models \| 30 NMR models]]' scene=''>		<StructureSection load='1de2' size='340' side='right' caption='[[1de2]], [[NMR_Ensembles_of_Models \| 30 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1de2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Enterobacteria_phage_t4 Enterobacteria phage t4~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DE2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1DE2 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1de2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bpt4 Bpt4]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DE2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1DE2 FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1de1\|1de1]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1de1\|1de1]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1de2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1de2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1de2 RCSB], [http://www.ebi.ac.uk/pdbsum/1de2 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1de2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1de2 OCA], [http://pdbe.org/1de2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1de2 RCSB], [http://www.ebi.ac.uk/pdbsum/1de2 PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 22:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Enterobacteria phage t4~~]]	+	[[Category: Bpt4]]
	[[Category: Wang, Y]]		[[Category: Wang, Y]]
	[[Category: Wishart, D S]]		[[Category: Wishart, D S]]
	[[Category: Electron transport]]		[[Category: Electron transport]]
	[[Category: Glutaredoxin]]		[[Category: Glutaredoxin]]

OCA at 19:14, 25 December 2014

OCA — Thu, 25 Dec 2014 19:14:03 GMT

←Older revision		Revision as of 19:14, 25 December 2014
Line 6:		Line 6:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1de2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1de2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1de2 RCSB], [http://www.ebi.ac.uk/pdbsum/1de2 PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1de2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1de2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1de2 RCSB], [http://www.ebi.ac.uk/pdbsum/1de2 PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/GLRX_BPT4 GLRX_BPT4]] Serves as a reducing agent for the phage-induced ribonucleotide reductase, but not for the bacterial ones. This specificity may be the result of sequence differences around the redox-active disulfide bond. The oxidized form accepts electrons from bacterial glutathione and will, in turn, reduce other small disulfides. Can also be reduced by NADPH and by bacterial thioredoxin reductase.<ref>PMID:8440680</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 16:		Line 18:
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 18:37, 22 December 2014

OCA — Mon, 22 Dec 2014 18:37:49 GMT

←Older revision		Revision as of 18:37, 22 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1de2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_t4 Enterobacteria phage t4]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DE2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1DE2 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1de2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_t4 Enterobacteria phage t4]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DE2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1DE2 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1de1\|1de1]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1de1\|1de1]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1de2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1de2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1de2 RCSB], [http://www.ebi.ac.uk/pdbsum/1de2 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1de2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1de2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1de2 RCSB], [http://www.ebi.ac.uk/pdbsum/1de2 PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 19:		Line 19:
	</StructureSection>		</StructureSection>
	[[Category: Enterobacteria phage t4]]		[[Category: Enterobacteria phage t4]]
-	[[Category: Wang, Y.]]	+	[[Category: Wang, Y]]
-	[[Category: Wishart, D S.]]	+	[[Category: Wishart, D S]]
	[[Category: Electron transport]]		[[Category: Electron transport]]
	[[Category: Glutaredoxin]]		[[Category: Glutaredoxin]]

OCA at 06:49, 4 September 2014

OCA — Thu, 04 Sep 2014 06:49:46 GMT

←Older revision		Revision as of 06:49, 4 September 2014
Line 1:		Line 1:
-	~~[[Image:1de2.png\|left\|200px]]~~	+	==NMR STRUCTURES OF REDUCED BACTERIOPHAGE T4 GLUTAREDOXIN==
-		+	<StructureSection load='1de2' size='340' side='right' caption='[[1de2]], [[NMR_Ensembles_of_Models \| 30 NMR models]]' scene=''>
-	~~{{STRUCTURE_1de2\| PDB=1de2 \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[1de2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_t4 Enterobacteria phage t4]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DE2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1DE2 FirstGlance]. <br>
-	===NMR STRUCTURES OF REDUCED BACTERIOPHAGE T4 GLUTAREDOXIN===	+	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1de1\|1de1]]</td></tr>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1de2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1de2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1de2 RCSB], [http://www.ebi.ac.uk/pdbsum/1de2 PDBsum]</span></td></tr>
-		+	<table>
-	==~~About this Structure~~==	+	== Evolutionary Conservation ==
-	[[1de2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_t4 Enterobacteria phage t4]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DE2 OCA].	+	[[Image:Consurf_key_small.gif\|200px\|right]]
-		+	Check<jmol>
-	==~~Reference~~==	+	<jmolCheckbox>
-	<~~ref group~~="~~xtra~~">~~PMID:015017142~~</~~ref~~><~~references group~~="~~xtra~~"/>	+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/de/1de2_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Enterobacteria phage t4]]		[[Category: Enterobacteria phage t4]]
	[[Category: Wang, Y.]]		[[Category: Wang, Y.]]

OCA: Protected "1de2" [edit=sysop:move=sysop]

OCA — Sun, 21 Oct 2012 20:24:12 GMT

Protected "1de2" [edit=sysop:move=sysop]

←Older revision

Revision as of 20:24, 21 October 2012

OCA at 20:24, 21 October 2012

OCA — Sun, 21 Oct 2012 20:24:08 GMT

←Older revision		Revision as of 20:24, 21 October 2012
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-	{{Seed}}
	[[Image:1de2.png\|left\|200px]]		[[Image:1de2.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1de2", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
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	{{STRUCTURE_1de2\| PDB=1de2 \| SCENE= }}		{{STRUCTURE_1de2\| PDB=1de2 \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	~~1DE2~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_t4 Enterobacteria phage t4]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DE2 OCA].	+	[[1de2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_t4 Enterobacteria phage t4]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DE2 OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~15017142~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:015017142</ref><references group="xtra"/>
	[[Category: Enterobacteria phage t4]]		[[Category: Enterobacteria phage t4]]
	[[Category: Wang, Y.]]		[[Category: Wang, Y.]]
	[[Category: Wishart, D S.]]		[[Category: Wishart, D S.]]
		+	[[Category: Electron transport]]
	[[Category: Glutaredoxin]]		[[Category: Glutaredoxin]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 04:10:05 2009''