1dsq - Revision history

OCA at 11:45, 22 November 2023

OCA — Wed, 22 Nov 2023 11:45:50 GMT

←Older revision		Revision as of 11:45, 22 November 2023
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	==STRUCTURE OF THE MMTV NUCLEOCAPSID PROTEIN (ZINC FINGER 1)==		==STRUCTURE OF THE MMTV NUCLEOCAPSID PROTEIN (ZINC FINGER 1)==
-	<StructureSection load='1dsq' size='340' side='right'caption='[[1dsq~~]], [[NMR_Ensembles_of_Models \| 20 NMR models~~]]' scene=''>	+	<StructureSection load='1dsq' size='340' side='right'caption='[[1dsq]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1dsq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Mmtv Mmtv~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DSQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DSQ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1dsq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mouse_mammary_tumor_virus Mouse mammary tumor virus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DSQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DSQ FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max-height: 3em;~~'>~~[[1dsv\|1dsv]]~~</~~div~~></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dsq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dsq OCA], [https://pdbe.org/1dsq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dsq RCSB], [https://www.ebi.ac.uk/pdbsum/1dsq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dsq ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dsq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dsq OCA], [https://pdbe.org/1dsq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dsq RCSB], [https://www.ebi.ac.uk/pdbsum/1dsq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dsq ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/GAG_MMTVC GAG_MMTVC]] p10 is the matrix protein. P14 is the nucleocapsid protein. Binds to single stranded DNA. p27 is the capsid protein.	+	[https://www.uniprot.org/uniprot/GAG_MMTVC GAG_MMTVC] p10 is the matrix protein. P14 is the nucleocapsid protein. Binds to single stranded DNA. p27 is the capsid protein.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 24:		Line 24:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Mmtv~~]]	+	[[Category: Mouse mammary tumor virus]]
-	[[Category: ~~Guzman, R N.~~De]]	+	[[Category: De Guzman RN]]
-	[[Category: Johnson~~, P E~~]]	+	[[Category: Johnson PE]]
-	[[Category: Klein~~, D J~~]]	+	[[Category: Klein DJ]]
-	[[Category: Summers~~, M F~~]]	+	[[Category: Summers MF]]
-	[[Category: Zollars~~, E S]]~~	+	[[Category: Zollars ES]]
-	~~[[Category: Cchc type zinc finger]]~~	+
-	~~[[Category: Viral protein]]~~	+
-	~~[[Category: Virus/viral protein~~]]	+

OCA at 10:38, 16 February 2022

OCA — Wed, 16 Feb 2022 10:38:59 GMT

←Older revision		Revision as of 10:38, 16 February 2022
Line 3:		Line 3:
	<StructureSection load='1dsq' size='340' side='right'caption='[[1dsq]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='1dsq' size='340' side='right'caption='[[1dsq]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1dsq]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DSQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DSQ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1dsq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mmtv Mmtv]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DSQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DSQ FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1dsv\|1dsv]]</div></td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1dsv\|1dsv]]</div></td></tr>
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	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
		+	[[Category: Mmtv]]
	[[Category: Guzman, R N.De]]		[[Category: Guzman, R N.De]]
	[[Category: Johnson, P E]]		[[Category: Johnson, P E]]

OCA at 18:34, 10 March 2021

OCA — Wed, 10 Mar 2021 18:34:23 GMT

←Older revision		Revision as of 18:34, 10 March 2021
Line 3:		Line 3:
	<StructureSection load='1dsq' size='340' side='right'caption='[[1dsq]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='1dsq' size='340' side='right'caption='[[1dsq]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1dsq]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DSQ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1DSQ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1dsq]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DSQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DSQ FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1dsv\|1dsv]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1dsv\|1dsv]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1dsq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dsq OCA], [~~http~~://pdbe.org/1dsq PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1dsq RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1dsq PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1dsq ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dsq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dsq OCA], [https://pdbe.org/1dsq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dsq RCSB], [https://www.ebi.ac.uk/pdbsum/1dsq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dsq ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/GAG_MMTVC GAG_MMTVC]] p10 is the matrix protein. P14 is the nucleocapsid protein. Binds to single stranded DNA. p27 is the capsid protein.	+	[[https://www.uniprot.org/uniprot/GAG_MMTVC GAG_MMTVC]] p10 is the matrix protein. P14 is the nucleocapsid protein. Binds to single stranded DNA. p27 is the capsid protein.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==

OCA at 23:25, 5 June 2019

OCA — Wed, 05 Jun 2019 23:25:51 GMT

←Older revision		Revision as of 23:25, 5 June 2019
Line 1:		Line 1:

	==STRUCTURE OF THE MMTV NUCLEOCAPSID PROTEIN (ZINC FINGER 1)==		==STRUCTURE OF THE MMTV NUCLEOCAPSID PROTEIN (ZINC FINGER 1)==
-	<StructureSection load='1dsq' size='340' side='right' caption='[[1dsq]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>	+	<StructureSection load='1dsq' size='340' side='right'caption='[[1dsq]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1dsq]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DSQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1DSQ FirstGlance]. <br>		<table><tr><td colspan='2'>[[1dsq]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DSQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1DSQ FirstGlance]. <br>
Line 23:		Line 23:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Guzman, R N.De]]		[[Category: Guzman, R N.De]]
	[[Category: Johnson, P E]]		[[Category: Johnson, P E]]

OCA at 04:02, 30 August 2017

OCA — Wed, 30 Aug 2017 04:02:55 GMT

←Older revision		Revision as of 04:02, 30 August 2017
Line 1:		Line 1:
		+
	==STRUCTURE OF THE MMTV NUCLEOCAPSID PROTEIN (ZINC FINGER 1)==		==STRUCTURE OF THE MMTV NUCLEOCAPSID PROTEIN (ZINC FINGER 1)==
	<StructureSection load='1dsq' size='340' side='right' caption='[[1dsq]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='1dsq' size='340' side='right' caption='[[1dsq]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1dsq]] is a 1 chain structure ~~with sequence from [http://en.wikipedia.org/wiki/Mmtv Mmtv]~~. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DSQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1DSQ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1dsq]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DSQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1DSQ FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1dsv\|1dsv]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1dsv\|1dsv]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1dsq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dsq OCA], [http://pdbe.org/1dsq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1dsq RCSB], [http://www.ebi.ac.uk/pdbsum/1dsq PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1dsq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dsq OCA], [http://pdbe.org/1dsq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1dsq RCSB], [http://www.ebi.ac.uk/pdbsum/1dsq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1dsq ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Mmtv]]
	[[Category: Guzman, R N.De]]		[[Category: Guzman, R N.De]]
	[[Category: Johnson, P E]]		[[Category: Johnson, P E]]

OCA at 21:36, 9 September 2015

OCA — Wed, 09 Sep 2015 21:36:00 GMT

←Older revision		Revision as of 21:36, 9 September 2015
Line 2:		Line 2:
	<StructureSection load='1dsq' size='340' side='right' caption='[[1dsq]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='1dsq' size='340' side='right' caption='[[1dsq]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1dsq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Mouse_mammary_tumor_virus Mouse mammary tumor virus~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DSQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1DSQ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1dsq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mmtv Mmtv]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DSQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1DSQ FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1dsv\|1dsv]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1dsv\|1dsv]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1dsq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dsq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1dsq RCSB], [http://www.ebi.ac.uk/pdbsum/1dsq PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1dsq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dsq OCA], [http://pdbe.org/1dsq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1dsq RCSB], [http://www.ebi.ac.uk/pdbsum/1dsq PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 17:		Line 17:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1dsq" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Mouse mammary tumor virus~~]]	+	[[Category: Mmtv]]
	[[Category: Guzman, R N.De]]		[[Category: Guzman, R N.De]]
	[[Category: Johnson, P E]]		[[Category: Johnson, P E]]

OCA at 07:42, 24 December 2014

OCA — Wed, 24 Dec 2014 07:42:03 GMT

←Older revision		Revision as of 07:42, 24 December 2014
Line 7:		Line 7:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1dsq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dsq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1dsq RCSB], [http://www.ebi.ac.uk/pdbsum/1dsq PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1dsq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dsq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1dsq RCSB], [http://www.ebi.ac.uk/pdbsum/1dsq PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/GAG_MMTVC GAG_MMTVC]] p10 is the matrix protein. P14 is the nucleocapsid protein. Binds to single stranded DNA. p27 is the capsid protein.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==

OCA at 19:11, 22 December 2014

OCA — Mon, 22 Dec 2014 19:11:52 GMT

←Older revision		Revision as of 19:11, 22 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1dsq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mouse_mammary_tumor_virus Mouse mammary tumor virus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DSQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1DSQ FirstGlance]. <br>		<table><tr><td colspan='2'>[[1dsq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mouse_mammary_tumor_virus Mouse mammary tumor virus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DSQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1DSQ FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1dsv\|1dsv]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1dsv\|1dsv]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1dsq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dsq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1dsq RCSB], [http://www.ebi.ac.uk/pdbsum/1dsq PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1dsq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dsq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1dsq RCSB], [http://www.ebi.ac.uk/pdbsum/1dsq PDBsum]</span></td></tr>
-	<table>	+	</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 20:		Line 20:
	</StructureSection>		</StructureSection>
	[[Category: Mouse mammary tumor virus]]		[[Category: Mouse mammary tumor virus]]
-	[[Category: Guzman, R N.De.]]	+	[[Category: Guzman, R N.De]]
-	[[Category: Johnson, P E.]]	+	[[Category: Johnson, P E]]
-	[[Category: Klein, D J.]]	+	[[Category: Klein, D J]]
-	[[Category: Summers, M F.]]	+	[[Category: Summers, M F]]
-	[[Category: Zollars, E S.]]	+	[[Category: Zollars, E S]]
	[[Category: Cchc type zinc finger]]		[[Category: Cchc type zinc finger]]
	[[Category: Viral protein]]		[[Category: Viral protein]]
	[[Category: Virus/viral protein]]		[[Category: Virus/viral protein]]

OCA at 05:30, 8 June 2014

OCA — Sun, 08 Jun 2014 05:30:04 GMT

←Older revision		Revision as of 05:30, 8 June 2014
Line 1:		Line 1:
-	[[~~Image:~~1dsq.~~png~~\|~~left~~\|~~200px~~]]	+	==STRUCTURE OF THE MMTV NUCLEOCAPSID PROTEIN (ZINC FINGER 1)==
		+	<StructureSection load='1dsq' size='340' side='right' caption='[[1dsq]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1dsq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mouse_mammary_tumor_virus Mouse mammary tumor virus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DSQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1DSQ FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br>
		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1dsv\|1dsv]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1dsq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dsq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1dsq RCSB], [http://www.ebi.ac.uk/pdbsum/1dsq PDBsum]</span></td></tr>
		+	<table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The nucleocapsid protein (NC) from the mouse mammary tumor virus (MMTV) has been overexpressed in Escherichia coli and purified to homogeneity for structural studies by nuclear magnetic resonance (NMR) spectroscopy. The protein contains two copies of a conserved zinc-coordinating "CCHC array" or "zinc knuckle" motif common to the nucleocapsid proteins of nearly all known retroviruses. The residues comprising and adjacent to the zinc knuckles were assigned by standard two-dimensional (1)H and three-dimensional (1)H-(15)N NMR methods; the rotational dynamic properties of the protein were determined from (15)N relaxation experiments, and distance restraints derived from the nuclear Overhauser effect (NOE) data were used to calculate the three-dimensional structure. The (1)H-(1)H NOE and (15)N relaxation data indicate that the two zinc knuckles do not interact with each other, but instead behave as independently folded domains connected by a flexible 13-residue linker segment. The proximal zinc knuckle folds in a manner that is essentially identical to that observed previously for the two zinc knuckles of the human immunodeficiency virus type 1 nucleocapsid protein and for the moloney murine leukemia virus nucleocapsid zinc knuckle domain. However, the distal zinc knuckle of MMTV NC exhibits a rare three-dimensional fold that includes an additional C-terminal beta-hairpin. A similar C-terminal reverse turn-like structure was observed recently in the distal zinc knuckle of the Mason-Pfizer monkey virus nucleocapsid protein [Gao, Y., et al. (1998) Protein Sci. 7, 2265-2280]. However, despite a high degree of sequence homology, the conformation and orientation of the beta-hairpin in MMTV NC is significantly different from that of the reverse turn in MPMV NC. The results support the conclusion that structural features of NC zinc knuckle domains can vary significantly among the different genera of retroviridae, and are discussed in terms of the recent and surprising discovery that MMTV NC can facilitate packaging of the HIV-1 genome in chimeric MMTV mutants.

-	~~{{STRUCTURE_1dsq\| PDB=1dsq \| SCENE= }}~~	+	The NMR structure of the nucleocapsid protein from the mouse mammary tumor virus reveals unusual folding of the C-terminal zinc knuckle.,Klein DJ, Johnson PE, Zollars ES, De Guzman RN, Summers MF Biochemistry. 2000 Feb 22;39(7):1604-12. PMID:10677209<ref>PMID:10677209</ref>

-	~~===STRUCTURE OF THE MMTV NUCLEOCAPSID PROTEIN (ZINC FINGER 1)===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_10677209}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[1dsq]] is~~ a ~~1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Mouse_mammary_tumor_virus Mouse mammary tumor virus]~~. ~~Full experimental information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=1DSQ OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:010677209<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Mouse mammary tumor virus]]		[[Category: Mouse mammary tumor virus]]
	[[Category: Guzman, R N.De.]]		[[Category: Guzman, R N.De.]]

OCA: Protected "1dsq" [edit=sysop:move=sysop]

OCA — Tue, 14 Aug 2012 17:16:01 GMT

Protected "1dsq" [edit=sysop:move=sysop]

←Older revision

Revision as of 17:16, 14 August 2012