1e63 - Revision history

OCA at 11:53, 13 December 2023

OCA — Wed, 13 Dec 2023 11:53:25 GMT

←Older revision		Revision as of 11:53, 13 December 2023
Line 3:		Line 3:
	<StructureSection load='1e63' size='340' side='right'caption='[[1e63]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='1e63' size='340' side='right'caption='[[1e63]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1e63]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Anabaena_pcc7119 Anabaena pcc7119~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E63 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1E63 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1e63]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Nostoc_sp._PCC_7119 Nostoc sp. PCC 7119]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E63 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1E63 FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=FAD:FLAVIN~~-~~ADENINE+DINUCLEOTIDE'>FAD</scene>~~, ~~<scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.3Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max~~-~~height: 3em;~~'>~~[[1que\|1que]], [[1quf\|1quf]], [[1bjk\|1bjk]], [[1b2r\|1b2r]], [[1e62\|1e62]]~~</~~div~~><~~/td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	~~<tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b></td><td class="sblockDat"><span class='plainlinks~~'>~~[https://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2]~~ </~~span~~></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1e63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e63 OCA], [https://pdbe.org/1e63 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1e63 RCSB], [https://www.ebi.ac.uk/pdbsum/1e63 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1e63 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1e63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e63 OCA], [https://pdbe.org/1e63 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1e63 RCSB], [https://www.ebi.ac.uk/pdbsum/1e63 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1e63 ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/FENR_NOSSO FENR_NOSSO]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 32:		Line 33:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Anabaena pcc7119]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Gomez-Moreno, C]]	+	[[Category: Nostoc sp. PCC 7119]]
-	[[Category: Hermoso~~, J A~~]]	+	[[Category: Gomez-Moreno C]]
-	[[Category: Mayoral, T]]	+	[[Category: Hermoso JA]]
-	[[Category: Medina, M]]	+	[[Category: Mayoral T]]
-	~~[[Category: Fad]]~~	+	[[Category: Medina M]]
-	~~[[Category: Flavoprotein]]~~	+
-	~~[[Category: Fnr]]~~	+
-	~~[[Category: Nadp]]~~	+
-	~~[[Category: Nadp reductase]]~~	+
-	~~[[Category: Oxidoreductase~~]]	+

OCA at 07:04, 24 February 2021

OCA — Wed, 24 Feb 2021 07:04:10 GMT

←Older revision		Revision as of 07:04, 24 February 2021
Line 3:		Line 3:
	<StructureSection load='1e63' size='340' side='right'caption='[[1e63]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='1e63' size='340' side='right'caption='[[1e63]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1e63]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Anabaena_pcc7119 Anabaena pcc7119]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E63 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1E63 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1e63]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Anabaena_pcc7119 Anabaena pcc7119]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E63 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1E63 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1que\|1que]], [[1quf\|1quf]], [[1bjk\|1bjk]], [[1b2r\|1b2r]], [[1e62\|1e62]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1que\|1que]], [[1quf\|1quf]], [[1bjk\|1bjk]], [[1b2r\|1b2r]], [[1e62\|1e62]]</div></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1e63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e63 OCA], [~~http~~://pdbe.org/1e63 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1e63 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1e63 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1e63 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1e63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e63 OCA], [https://pdbe.org/1e63 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1e63 RCSB], [https://www.ebi.ac.uk/pdbsum/1e63 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1e63 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 07:00, 23 May 2019

OCA — Thu, 23 May 2019 07:00:44 GMT

←Older revision		Revision as of 07:00, 23 May 2019
Line 1:		Line 1:

	==Ferredoxin:NADP+ Reductase Mutant with LYS 75 Replaced by SER (K75S)==		==Ferredoxin:NADP+ Reductase Mutant with LYS 75 Replaced by SER (K75S)==
-	<StructureSection load='1e63' size='340' side='right' caption='[[1e63]], [[Resolution\|resolution]] 2.30Å' scene=''>	+	<StructureSection load='1e63' size='340' side='right'caption='[[1e63]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1e63]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Anabaena_pcc7119 Anabaena pcc7119]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E63 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1E63 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1e63]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Anabaena_pcc7119 Anabaena pcc7119]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E63 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1E63 FirstGlance]. <br>
Line 33:		Line 33:
	</StructureSection>		</StructureSection>
	[[Category: Anabaena pcc7119]]		[[Category: Anabaena pcc7119]]
		+	[[Category: Large Structures]]
	[[Category: Gomez-Moreno, C]]		[[Category: Gomez-Moreno, C]]
	[[Category: Hermoso, J A]]		[[Category: Hermoso, J A]]

OCA at 05:41, 30 May 2018

OCA — Wed, 30 May 2018 05:41:25 GMT

←Older revision		Revision as of 05:41, 30 May 2018
Line 1:		Line 1:

-	==~~FERREDOXIN~~:NADP+ ~~REDUCTASE MUTANT WITH~~ LYS 75 ~~REPLACED BY~~ SER (K75S)==	+	==Ferredoxin:NADP+ Reductase Mutant with LYS 75 Replaced by SER (K75S)==
	<StructureSection load='1e63' size='340' side='right' caption='[[1e63]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='1e63' size='340' side='right' caption='[[1e63]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==

OCA at 07:58, 13 December 2017

OCA — Wed, 13 Dec 2017 07:58:13 GMT

←Older revision		Revision as of 07:58, 13 December 2017
Line 1:		Line 1:
		+
	==FERREDOXIN:NADP+ REDUCTASE MUTANT WITH LYS 75 REPLACED BY SER (K75S)==		==FERREDOXIN:NADP+ REDUCTASE MUTANT WITH LYS 75 REPLACED BY SER (K75S)==
	<StructureSection load='1e63' size='340' side='right' caption='[[1e63]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='1e63' size='340' side='right' caption='[[1e63]], [[Resolution\|resolution]] 2.30Å' scene=''>
Line 6:		Line 7:
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1que\|1que]], [[1quf\|1quf]], [[1bjk\|1bjk]], [[1b2r\|1b2r]], [[1e62\|1e62]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1que\|1que]], [[1quf\|1quf]], [[1bjk\|1bjk]], [[1b2r\|1b2r]], [[1e62\|1e62]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1e63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e63 OCA], [http://pdbe.org/1e63 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1e63 RCSB], [http://www.ebi.ac.uk/pdbsum/1e63 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1e63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e63 OCA], [http://pdbe.org/1e63 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1e63 RCSB], [http://www.ebi.ac.uk/pdbsum/1e63 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1e63 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 12:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e6/1e63_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e6/1e63_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 09:35, 7 February 2016

OCA — Sun, 07 Feb 2016 09:35:09 GMT

←Older revision		Revision as of 09:35, 7 February 2016
Line 16:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1e63 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 00:06, 10 September 2015

OCA — Thu, 10 Sep 2015 00:06:53 GMT

←Older revision		Revision as of 00:06, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='1e63' size='340' side='right' caption='[[1e63]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='1e63' size='340' side='right' caption='[[1e63]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1e63]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Anabaena_sp.~~ Anabaena ~~sp.~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E63 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1E63 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1e63]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Anabaena_pcc7119 Anabaena pcc7119]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E63 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1E63 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1que\|1que]], [[1quf\|1quf]], [[1bjk\|1bjk]], [[1b2r\|1b2r]], [[1e62\|1e62]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1que\|1que]], [[1quf\|1quf]], [[1bjk\|1bjk]], [[1b2r\|1b2r]], [[1e62\|1e62]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1e63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e63 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1e63 RCSB], [http://www.ebi.ac.uk/pdbsum/1e63 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1e63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e63 OCA], [http://pdbe.org/1e63 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1e63 RCSB], [http://www.ebi.ac.uk/pdbsum/1e63 PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 26:		Line 26:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1e63" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Anabaena sp]]	+	[[Category: Anabaena pcc7119]]
	[[Category: Gomez-Moreno, C]]		[[Category: Gomez-Moreno, C]]
	[[Category: Hermoso, J A]]		[[Category: Hermoso, J A]]

OCA at 21:33, 22 December 2014

OCA — Mon, 22 Dec 2014 21:33:58 GMT

←Older revision		Revision as of 21:33, 22 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1e63]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Anabaena_sp. Anabaena sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E63 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1E63 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1e63]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Anabaena_sp. Anabaena sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E63 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1E63 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1que\|1que]], [[1quf\|1quf]], [[1bjk\|1bjk]], [[1b2r\|1b2r]], [[1e62\|1e62]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1que\|1que]], [[1quf\|1quf]], [[1bjk\|1bjk]], [[1b2r\|1b2r]], [[1e62\|1e62]]</td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1e63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e63 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1e63 RCSB], [http://www.ebi.ac.uk/pdbsum/1e63 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1e63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e63 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1e63 RCSB], [http://www.ebi.ac.uk/pdbsum/1e63 PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 30:		Line 30:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Anabaena sp.]]	+	[[Category: Anabaena sp]]
-	[[Category: Gomez-Moreno, C.]]	+	[[Category: Gomez-Moreno, C]]
-	[[Category: Hermoso, J A.]]	+	[[Category: Hermoso, J A]]
-	[[Category: Mayoral, T.]]	+	[[Category: Mayoral, T]]
-	[[Category: Medina, M.]]	+	[[Category: Medina, M]]
	[[Category: Fad]]		[[Category: Fad]]
	[[Category: Flavoprotein]]		[[Category: Flavoprotein]]

OCA at 10:04, 3 October 2014

OCA — Fri, 03 Oct 2014 10:04:43 GMT

←Older revision		Revision as of 10:04, 3 October 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_1e63\| PDB=1e63 \| SCENE= }}~~	+	==FERREDOXIN:NADP+ REDUCTASE MUTANT WITH LYS 75 REPLACED BY SER (K75S)==
-	===FERREDOXIN:NADP+ REDUCTASE MUTANT WITH LYS 75 REPLACED BY SER (K75S)===	+	<StructureSection load='1e63' size='340' side='right' caption='[[1e63]], [[Resolution\|resolution]] 2.30Å' scene=''>
-	~~{{ABSTRACT_PUBMED_15789405}}~~	+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1e63]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Anabaena_sp. Anabaena sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E63 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1E63 FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br>
		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1que\|1que]], [[1quf\|1quf]], [[1bjk\|1bjk]], [[1b2r\|1b2r]], [[1e62\|1e62]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span></td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1e63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e63 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1e63 RCSB], [http://www.ebi.ac.uk/pdbsum/1e63 PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e6/1e63_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The three-dimensional structures of K72E, K75R, K75S, K75Q, and K75E Anabaena Ferredoxin-NADP+ reductase (FNR) mutants have been solved, and particular structural details of these mutants have been used to assess the role played by residues 72 and 75 in optimal complex formation and electron transfer (ET) between FNR and its protein redox partners Ferredoxin (Fd) and Flavodoxin (Fld). Additionally, because there is no structural information available on the interaction between FNR and Fld, a model for the FNR:Fld complex has also been produced based on the previously reported crystal structures and on that of the rat Cytochrome P450 reductase (CPR), onto which FNR and Fld have been structurally aligned, and those reported for the Anabaena and maize FNR:Fd complexes. The model suggests putative electrostatic and hydrophobic interactions between residues on the FNR and Fld surfaces at the complex interface and provides an adequate orientation and distance between the FAD and FMN redox centers for efficient ET without the presence of any other molecule as electron carrier. Thus, the models now available for the FNR:Fd and FNR:Fld interactions and the structures presented here for the mutants at K72 and K75 in Anabaena FNR have been evaluated in light of previous biochemical data. These structures confirm the key participation of residue K75 and K72 in complex formation with both Fd and Fld. The drastic effect in FNR activity produced by replacement of K75 by Glu in the K75E FNR variant is explained not only by the observed changes in the charge distribution on the surface of the K75E FNR mutant, but also by the formation of a salt bridge interaction between E75 and K72 that simultaneously "neutralizes" two essential positive charged side chains for Fld/Fd recognition.

-	~~==About this Structure==~~	+	Structural analysis of interactions for complex formation between Ferredoxin-NADP+ reductase and its protein partners.,Mayoral T, Martinez-Julvez M, Perez-Dorado I, Sanz-Aparicio J, Gomez-Moreno C, Medina M, Hermoso JA Proteins. 2005 May 15;59(3):592-602. PMID:15789405<ref>PMID:15789405</ref>
-	~~[[1e63]] is a 1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Anabaena_sp~~. ~~Anabaena sp.]. Full crystallographic information is available from [http~~:/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=1E63 OCA].~~	+

-	==~~Reference~~==	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~<ref group="xtra">PMID:015789405</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	</div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Anabaena sp.]]		[[Category: Anabaena sp.]]
	[[Category: Gomez-Moreno, C.]]		[[Category: Gomez-Moreno, C.]]

OCA at 10:51, 16 April 2014

OCA — Wed, 16 Apr 2014 10:51:03 GMT

←Older revision		Revision as of 10:51, 16 April 2014
Line 1:		Line 1:
-	[[Image:1e63.png\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_1e63", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_1e63\| PDB=1e63 \| SCENE= }}		{{STRUCTURE_1e63\| PDB=1e63 \| SCENE= }}
-
	===FERREDOXIN:NADP+ REDUCTASE MUTANT WITH LYS 75 REPLACED BY SER (K75S)===		===FERREDOXIN:NADP+ REDUCTASE MUTANT WITH LYS 75 REPLACED BY SER (K75S)===
-
-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_15789405}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 15789405 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_15789405}}		{{ABSTRACT_PUBMED_15789405}}

Line 22:		Line 7:

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~15789405~~</ref><~~ref~~ group="xtra"~~>PMID:8890910<~~/~~ref~~><references ~~group="xtra"~~/>	+	<ref group="xtra">PMID:015789405</ref><references group="xtra"/><references/>
	[[Category: Anabaena sp.]]		[[Category: Anabaena sp.]]
	[[Category: Gomez-Moreno, C.]]		[[Category: Gomez-Moreno, C.]]