1ia6 - Revision history

OCA at 06:24, 9 August 2023

OCA — Wed, 09 Aug 2023 06:24:53 GMT

←Older revision		Revision as of 06:24, 9 August 2023
Line 3:		Line 3:
	<StructureSection load='1ia6' size='340' side='right'caption='[[1ia6]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='1ia6' size='340' side='right'caption='[[1ia6]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1ia6]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IA6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IA6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1ia6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ruminiclostridium_cellulolyticum Ruminiclostridium cellulolyticum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IA6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IA6 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene~~></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.8Å</td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1js4\|1js4]], [[1clc\|1clc]], [[1ia7\|1ia7]]</div></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Cellulase Cellulase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.4 3.2.1.4] </span></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ia6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ia6 OCA], [https://pdbe.org/1ia6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ia6 RCSB], [https://www.ebi.ac.uk/pdbsum/1ia6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ia6 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ia6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ia6 OCA], [https://pdbe.org/1ia6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ia6 RCSB], [https://www.ebi.ac.uk/pdbsum/1ia6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ia6 ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q9EYQ2_9FIRM Q9EYQ2_9FIRM]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 32:		Line 33:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Cellulase]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Belaich, A~~]]	+	[[Category: Ruminiclostridium cellulolyticum]]
-	[[Category: Belaich~~, J P~~]]	+	[[Category: Belaich A]]
-	[[Category: ~~Haser, R~~]]	+	[[Category: Belaich JP]]
-	[[Category: ~~Parsiegla, G~~]]	+	[[Category: Haser R]]
-	[[Category: ~~Alpha barrel]]~~	+	[[Category: Parsiegla G]]
-	~~[[Category: Cellullase]]~~	+
-	~~[[Category: Hydrolase~~]]	+

OCA at 07:38, 7 April 2021

OCA — Wed, 07 Apr 2021 07:38:31 GMT

←Older revision		Revision as of 07:38, 7 April 2021
Line 3:		Line 3:
	<StructureSection load='1ia6' size='340' side='right'caption='[[1ia6]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='1ia6' size='340' side='right'caption='[[1ia6]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1ia6]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IA6 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1IA6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1ia6]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IA6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IA6 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1js4\|1js4]], [[1clc\|1clc]], [[1ia7\|1ia7]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1js4\|1js4]], [[1clc\|1clc]], [[1ia7\|1ia7]]</div></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Cellulase Cellulase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.4 3.2.1.4] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Cellulase Cellulase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.4 3.2.1.4] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1ia6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ia6 OCA], [~~http~~://pdbe.org/1ia6 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1ia6 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1ia6 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1ia6 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ia6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ia6 OCA], [https://pdbe.org/1ia6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ia6 RCSB], [https://www.ebi.ac.uk/pdbsum/1ia6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ia6 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 07:15, 3 July 2019

OCA — Wed, 03 Jul 2019 07:15:57 GMT

←Older revision		Revision as of 07:15, 3 July 2019
Line 1:		Line 1:

	==CRYSTAL STRUCTURE OF THE CELLULASE CEL9M OF C. CELLULOLYTICUM==		==CRYSTAL STRUCTURE OF THE CELLULASE CEL9M OF C. CELLULOLYTICUM==
-	<StructureSection load='1ia6' size='340' side='right' caption='[[1ia6]], [[Resolution\|resolution]] 1.80Å' scene=''>	+	<StructureSection load='1ia6' size='340' side='right'caption='[[1ia6]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1ia6]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IA6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1IA6 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1ia6]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IA6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1IA6 FirstGlance]. <br>
Line 13:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ia/1ia6_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ia/1ia6_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 33:		Line 33:
	</StructureSection>		</StructureSection>
	[[Category: Cellulase]]		[[Category: Cellulase]]
		+	[[Category: Large Structures]]
	[[Category: Belaich, A]]		[[Category: Belaich, A]]
	[[Category: Belaich, J P]]		[[Category: Belaich, J P]]

OCA at 10:42, 27 September 2017

OCA — Wed, 27 Sep 2017 10:42:56 GMT

←Older revision		Revision as of 10:42, 27 September 2017
Line 1:		Line 1:
		+
	==CRYSTAL STRUCTURE OF THE CELLULASE CEL9M OF C. CELLULOLYTICUM==		==CRYSTAL STRUCTURE OF THE CELLULASE CEL9M OF C. CELLULOLYTICUM==
	<StructureSection load='1ia6' size='340' side='right' caption='[[1ia6]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='1ia6' size='340' side='right' caption='[[1ia6]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1ia6]] is a 1 chain structure ~~with sequence from [http://en.wikipedia.org/wiki/Atcc_35319 Atcc 35319]~~. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IA6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1IA6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1ia6]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IA6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1IA6 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1js4\|1js4]], [[1clc\|1clc]], [[1ia7\|1ia7]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1js4\|1js4]], [[1clc\|1clc]], [[1ia7\|1ia7]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cellulase Cellulase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.4 3.2.1.4] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cellulase Cellulase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.4 3.2.1.4] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ia6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ia6 OCA], [http://pdbe.org/1ia6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ia6 RCSB], [http://www.ebi.ac.uk/pdbsum/1ia6 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ia6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ia6 OCA], [http://pdbe.org/1ia6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ia6 RCSB], [http://www.ebi.ac.uk/pdbsum/1ia6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1ia6 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 16:		Line 17:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ia6 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 31:		Line 32:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Atcc 35319]]
	[[Category: Cellulase]]		[[Category: Cellulase]]
	[[Category: Belaich, A]]		[[Category: Belaich, A]]

OCA at 00:27, 12 September 2015

OCA — Sat, 12 Sep 2015 00:27:25 GMT

←Older revision		Revision as of 00:27, 12 September 2015
Line 2:		Line 2:
	<StructureSection load='1ia6' size='340' side='right' caption='[[1ia6]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='1ia6' size='340' side='right' caption='[[1ia6]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1ia6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Clostridium_cellulolyticum Clostridium cellulolyticum~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IA6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1IA6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1ia6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_35319 Atcc 35319]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IA6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1IA6 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1js4\|1js4]], [[1clc\|1clc]], [[1ia7\|1ia7]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1js4\|1js4]], [[1clc\|1clc]], [[1ia7\|1ia7]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cellulase Cellulase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.4 3.2.1.4] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cellulase Cellulase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.4 3.2.1.4] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ia6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ia6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ia6 RCSB], [http://www.ebi.ac.uk/pdbsum/1ia6 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ia6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ia6 OCA], [http://pdbe.org/1ia6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ia6 RCSB], [http://www.ebi.ac.uk/pdbsum/1ia6 PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 26:		Line 26:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1ia6" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Atcc 35319]]
	[[Category: Cellulase]]		[[Category: Cellulase]]
-	[[Category: Clostridium cellulolyticum]]
	[[Category: Belaich, A]]		[[Category: Belaich, A]]
	[[Category: Belaich, J P]]		[[Category: Belaich, J P]]

OCA at 09:35, 2 January 2015

OCA — Fri, 02 Jan 2015 09:35:02 GMT

←Older revision		Revision as of 09:35, 2 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1ia6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Clostridium_cellulolyticum Clostridium cellulolyticum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IA6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1IA6 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1ia6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Clostridium_cellulolyticum Clostridium cellulolyticum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IA6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1IA6 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1js4\|1js4]], [[1clc\|1clc]], [[1ia7\|1ia7]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1js4\|1js4]], [[1clc\|1clc]], [[1ia7\|1ia7]]</td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cellulase Cellulase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.4 3.2.1.4] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cellulase Cellulase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.4 3.2.1.4] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ia6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ia6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ia6 RCSB], [http://www.ebi.ac.uk/pdbsum/1ia6 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ia6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ia6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ia6 RCSB], [http://www.ebi.ac.uk/pdbsum/1ia6 PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 32:		Line 32:
	[[Category: Cellulase]]		[[Category: Cellulase]]
	[[Category: Clostridium cellulolyticum]]		[[Category: Clostridium cellulolyticum]]
-	[[Category: Belaich, A.]]	+	[[Category: Belaich, A]]
-	[[Category: Belaich, J P.]]	+	[[Category: Belaich, J P]]
-	[[Category: Haser, R.]]	+	[[Category: Haser, R]]
-	[[Category: Parsiegla, G.]]	+	[[Category: Parsiegla, G]]
	[[Category: Alpha barrel]]		[[Category: Alpha barrel]]
	[[Category: Cellullase]]		[[Category: Cellullase]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]

OCA at 12:27, 28 September 2014

OCA — Sun, 28 Sep 2014 12:27:39 GMT

←Older revision		Revision as of 12:27, 28 September 2014
Line 1:		Line 1:
-	[[~~Image:~~1ia6.~~png~~\|~~left~~\|200px]]	+	==CRYSTAL STRUCTURE OF THE CELLULASE CEL9M OF C. CELLULOLYTICUM==
		+	<StructureSection load='1ia6' size='340' side='right' caption='[[1ia6]], [[Resolution\|resolution]] 1.80Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1ia6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Clostridium_cellulolyticum Clostridium cellulolyticum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IA6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1IA6 FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br>
		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1js4\|1js4]], [[1clc\|1clc]], [[1ia7\|1ia7]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cellulase Cellulase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.4 3.2.1.4] </span></td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ia6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ia6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ia6 RCSB], [http://www.ebi.ac.uk/pdbsum/1ia6 PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ia/1ia6_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Cellulases cleave the beta-1.4 glycosidic bond of cellulose. They have been characterized as endo or exo and processive or nonprocessive cellulases according to their action mode on the substrate. Different types of these cellulases may coexist in the same glycoside hydrolase family, which have been classified according to their sequence homology and catalytic mechanism. The bacterium C. celluloyticum produces a set of different cellulases who belong mostly to glycoside hydrolase families 5 and 9. As an adaptation of the organism to different macroscopic substrates organizations and to maximize its cooperative digestion, it is expected that cellulases of these families are active on the various macroscopic organizations of cellulose chains. The nonprocessive cellulase Cel9M is the shortest variant of family 9 cellulases (subgroup 9(C)) which contains only the catalytic module to interact with the substrate. The crystal structures of free native Cel9M and its complex with cellobiose have been solved to 1.8 and 2.0 A resolution, respectively. Other structurally known family 9 cellulases are the nonprocessive endo-cellulase Cel9D from C. thermocellum and the processive endo-cellulase Cel9A from T. fusca, from subgroups 9(B1) and 9(A), respectively, whose catalytic modules are fused to a second domain. These enzymes differ in their activity on substrates with specific macroscopic appearances. The comparison of the catalytic module of Cel9M with the two other known GH family 9 structures may give clues to explain its substrate profile and action mode.

-	~~{{STRUCTURE_1ia6\| PDB=1ia6 \| SCENE= }}~~	+	Crystal structure of the cellulase Cel9M enlightens structure/function relationships of the variable catalytic modules in glycoside hydrolases.,Parsiegla G, Belaich A, Belaich JP, Haser R Biochemistry. 2002 Sep 17;41(37):11134-42. PMID:12220178<ref>PMID:12220178</ref>

-	~~===CRYSTAL STRUCTURE OF THE CELLULASE CEL9M OF C. CELLULOLYTICUM===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_12220178}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[1ia6]] is~~ a ~~1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Clostridium_cellulolyticum Clostridium cellulolyticum]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=1IA6 OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:012220178<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Cellulase]]		[[Category: Cellulase]]
	[[Category: Clostridium cellulolyticum]]		[[Category: Clostridium cellulolyticum]]

OCA: Protected "1ia6" [edit=sysop:move=sysop]

OCA — Wed, 28 Nov 2012 14:57:50 GMT

Protected "1ia6" [edit=sysop:move=sysop]

←Older revision

Revision as of 14:57, 28 November 2012

OCA at 14:57, 28 November 2012

OCA — Wed, 28 Nov 2012 14:57:49 GMT

←Older revision		Revision as of 14:57, 28 November 2012
Line 1:		Line 1:
-	{{Seed}}
	[[Image:1ia6.png\|left\|200px]]		[[Image:1ia6.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1ia6", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_1ia6\| PDB=1ia6 \| SCENE= }}		{{STRUCTURE_1ia6\| PDB=1ia6 \| SCENE= }}

	===CRYSTAL STRUCTURE OF THE CELLULASE CEL9M OF C. CELLULOLYTICUM===		===CRYSTAL STRUCTURE OF THE CELLULASE CEL9M OF C. CELLULOLYTICUM===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_12220178}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 12220178 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_12220178}}		{{ABSTRACT_PUBMED_12220178}}

	==About this Structure==		==About this Structure==
-	~~1IA6~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Clostridium_cellulolyticum Clostridium cellulolyticum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IA6 OCA].	+	[[1ia6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Clostridium_cellulolyticum Clostridium cellulolyticum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IA6 OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~12220178~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:012220178</ref><references group="xtra"/>
	[[Category: Cellulase]]		[[Category: Cellulase]]
	[[Category: Clostridium cellulolyticum]]		[[Category: Clostridium cellulolyticum]]
Line 32:		Line 20:
	[[Category: Alpha barrel]]		[[Category: Alpha barrel]]
	[[Category: Cellullase]]		[[Category: Cellullase]]
-		+	[[Category: Hydrolase]]
-	~~''Page seeded by~~ [~~http~~:~~//oca.weizmann.ac.il/oca OCA~~ ] ~~on Wed Feb 18 08:03:28 2009''~~	+

OCA at 06:03, 18 February 2009

OCA — Wed, 18 Feb 2009 06:03:29 GMT

←Older revision		Revision as of 06:03, 18 February 2009
Line 20:		Line 20:

	==About this Structure==		==About this Structure==
-	1IA6 is a ~~[[Single protein]]~~ structure of sequence from [http://en.wikipedia.org/wiki/Clostridium_cellulolyticum Clostridium cellulolyticum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IA6 OCA].	+	1IA6 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Clostridium_cellulolyticum Clostridium cellulolyticum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IA6 OCA].

	==Reference==		==Reference==
-	Crystal structure of the cellulase Cel9M enlightens structure/function relationships of the variable catalytic modules in glycoside hydrolases., Parsiegla G, Belaich A, Belaich JP, Haser R, Biochemistry. 2002 Sep 17;41(37):11134-42. PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/12220178 12220178]~~	+	<ref group="xtra">PMID:12220178</ref><references group="xtra"/>
	[[Category: Cellulase]]		[[Category: Cellulase]]
	[[Category: Clostridium cellulolyticum]]		[[Category: Clostridium cellulolyticum]]
-	[[Category: Single protein]]
	[[Category: Belaich, A.]]		[[Category: Belaich, A.]]
	[[Category: Belaich, J P.]]		[[Category: Belaich, J P.]]
Line 34:		Line 33:
	[[Category: Cellullase]]		[[Category: Cellullase]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Tue Jul 1 10~~:39:~~20 2008~~''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 08:03:28 2009''