1iua - Revision history

OCA at 23:37, 27 December 2023

OCA — Wed, 27 Dec 2023 23:37:07 GMT

←Older revision		Revision as of 23:37, 27 December 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1iua]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermochromatium_tepidum Thermochromatium tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IUA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IUA FirstGlance]. <br>		<table><tr><td colspan='2'>[[1iua]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermochromatium_tepidum Thermochromatium tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IUA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IUA FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>~~, ~~<scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 0.8Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max-height~~: ~~3em;~~'>~~[[1eyt\|1eyt]]~~</~~div~~></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1iua FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1iua OCA], [https://pdbe.org/1iua PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1iua RCSB], [https://www.ebi.ac.uk/pdbsum/1iua PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1iua ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1iua FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1iua OCA], [https://pdbe.org/1iua PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1iua RCSB], [https://www.ebi.ac.uk/pdbsum/1iua PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1iua ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/HIP_THETI HIP_THETI]] Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria.	+	[https://www.uniprot.org/uniprot/HIP_THETI HIP_THETI] Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 35:		Line 35:
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Thermochromatium tepidum]]		[[Category: Thermochromatium tepidum]]
-	[[Category: Kobayashi, M]]	+	[[Category: Kobayashi M]]
-	[[Category: Liu, L]]	+	[[Category: Liu L]]
-	[[Category: Miki, K]]	+	[[Category: Miki K]]
-	[[Category: Nogi, T]]	+	[[Category: Nogi T]]
-	[[Category: Nozawa, T]]	+	[[Category: Nozawa T]]
-	~~[[Category: Electron transport]]~~	+
-	~~[[Category: Hipip~~]]	+

OCA at 11:05, 4 August 2021

OCA — Wed, 04 Aug 2021 11:05:50 GMT

←Older revision		Revision as of 11:05, 4 August 2021
Line 3:		Line 3:
	<StructureSection load='1iua' size='340' side='right'caption='[[1iua]], [[Resolution\|resolution]] 0.80Å' scene=''>		<StructureSection load='1iua' size='340' side='right'caption='[[1iua]], [[Resolution\|resolution]] 0.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1iua]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Thermochromatium_tepidum Thermochromatium tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IUA OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1IUA FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1iua]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermochromatium_tepidum Thermochromatium tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IUA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IUA FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1eyt\|1eyt]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1eyt\|1eyt]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1iua FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1iua OCA], [~~http~~://pdbe.org/1iua PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1iua RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1iua PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1iua ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1iua FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1iua OCA], [https://pdbe.org/1iua PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1iua RCSB], [https://www.ebi.ac.uk/pdbsum/1iua PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1iua ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/HIP_THETI HIP_THETI]] Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria.	+	[[https://www.uniprot.org/uniprot/HIP_THETI HIP_THETI]] Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 10:37, 30 October 2019

OCA — Wed, 30 Oct 2019 10:37:21 GMT

←Older revision		Revision as of 10:37, 30 October 2019
Line 1:		Line 1:

	==Ultra-high resolution structure of HiPIP from Thermochromatium tepidum==		==Ultra-high resolution structure of HiPIP from Thermochromatium tepidum==
-	<StructureSection load='1iua' size='340' side='right' caption='[[1iua]], [[Resolution\|resolution]] 0.80Å' scene=''>	+	<StructureSection load='1iua' size='340' side='right'caption='[[1iua]], [[Resolution\|resolution]] 0.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1iua]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermochromatium_tepidum Thermochromatium tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IUA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1IUA FirstGlance]. <br>		<table><tr><td colspan='2'>[[1iua]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermochromatium_tepidum Thermochromatium tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IUA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1IUA FirstGlance]. <br>
Line 33:		Line 33:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Thermochromatium tepidum]]		[[Category: Thermochromatium tepidum]]
	[[Category: Kobayashi, M]]		[[Category: Kobayashi, M]]

OCA at 09:23, 17 January 2018

OCA — Wed, 17 Jan 2018 09:23:43 GMT

←Older revision		Revision as of 09:23, 17 January 2018
Line 1:		Line 1:
		+
	==Ultra-high resolution structure of HiPIP from Thermochromatium tepidum==		==Ultra-high resolution structure of HiPIP from Thermochromatium tepidum==
	<StructureSection load='1iua' size='340' side='right' caption='[[1iua]], [[Resolution\|resolution]] 0.80Å' scene=''>		<StructureSection load='1iua' size='340' side='right' caption='[[1iua]], [[Resolution\|resolution]] 0.80Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1eyt\|1eyt]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1eyt\|1eyt]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1iua FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1iua OCA], [http://pdbe.org/1iua PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1iua RCSB], [http://www.ebi.ac.uk/pdbsum/1iua PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1iua FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1iua OCA], [http://pdbe.org/1iua PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1iua RCSB], [http://www.ebi.ac.uk/pdbsum/1iua PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1iua ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 13:		Line 14:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iu/1iua_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iu/1iua_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 05:56, 7 February 2016

OCA — Sun, 07 Feb 2016 05:56:31 GMT

←Older revision		Revision as of 05:56, 7 February 2016
Line 17:		Line 17:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1iua ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 22:30, 9 September 2015

OCA — Wed, 09 Sep 2015 22:30:36 GMT

←Older revision		Revision as of 22:30, 9 September 2015
Line 5:		Line 5:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1eyt\|1eyt]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1eyt\|1eyt]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1iua FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1iua OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1iua RCSB], [http://www.ebi.ac.uk/pdbsum/1iua PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1iua FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1iua OCA], [http://pdbe.org/1iua PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1iua RCSB], [http://www.ebi.ac.uk/pdbsum/1iua PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 27:		Line 27:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1iua" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 08:25, 24 December 2014

OCA — Wed, 24 Dec 2014 08:25:37 GMT

←Older revision		Revision as of 08:25, 24 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1iua]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermochromatium_tepidum Thermochromatium tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IUA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1IUA FirstGlance]. <br>		<table><tr><td colspan='2'>[[1iua]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermochromatium_tepidum Thermochromatium tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IUA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1IUA FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1eyt\|1eyt]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1eyt\|1eyt]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1iua FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1iua OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1iua RCSB], [http://www.ebi.ac.uk/pdbsum/1iua PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1iua FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1iua OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1iua RCSB], [http://www.ebi.ac.uk/pdbsum/1iua PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/HIP_THETI HIP_THETI]] Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 30:		Line 32:
	</StructureSection>		</StructureSection>
	[[Category: Thermochromatium tepidum]]		[[Category: Thermochromatium tepidum]]
-	[[Category: Kobayashi, M.]]	+	[[Category: Kobayashi, M]]
-	[[Category: Liu, L.]]	+	[[Category: Liu, L]]
-	[[Category: Miki, K.]]	+	[[Category: Miki, K]]
-	[[Category: Nogi, T.]]	+	[[Category: Nogi, T]]
-	[[Category: Nozawa, T.]]	+	[[Category: Nozawa, T]]
	[[Category: Electron transport]]		[[Category: Electron transport]]
	[[Category: Hipip]]		[[Category: Hipip]]

OCA at 09:51, 28 September 2014

OCA — Sun, 28 Sep 2014 09:51:26 GMT

←Older revision		Revision as of 09:51, 28 September 2014
Line 1:		Line 1:
-	[[~~Image:~~1iua.~~png~~\|~~left~~\|200px]]	+	==Ultra-high resolution structure of HiPIP from Thermochromatium tepidum==
		+	<StructureSection load='1iua' size='340' side='right' caption='[[1iua]], [[Resolution\|resolution]] 0.80Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1iua]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermochromatium_tepidum Thermochromatium tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IUA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1IUA FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br>
		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1eyt\|1eyt]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1iua FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1iua OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1iua RCSB], [http://www.ebi.ac.uk/pdbsum/1iua PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iu/1iua_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Crystals of the high-potential iron-sulfur protein (HiPIP) from Thermochromatium tepidum diffract X-rays to 0.80 A using synchrotron radiation at 100 K. The crystal structure of this HiPIP was refined at this ultrahigh resolution with anisotropic temperature factors for all atoms to conventional crystallographic R factors of 0.092 and 0.101 for F(o) > 4sigma(F(o)) and all reflections, respectively. The present structure provides a more precise picture than the previous 1.5 A structure and allows location of the positions of most H atoms. The structure revealed a partly hydrophobic cavity near the main hydrophobic area and a much larger inter-cluster approach distance (23.454 A, the c constant of the unit cell) in the crystal packing than other types of HiPIPs. The structural features involved in the electron-transfer reaction of HiPIP are discussed.

-	~~{{STRUCTURE_1iua\| PDB=1iua \| SCENE= }}~~	+	Ultrahigh-resolution structure of high-potential iron-sulfur protein from Thermochromatium tepidum.,Liu L, Nogi T, Kobayashi M, Nozawa T, Miki K Acta Crystallogr D Biol Crystallogr. 2002 Jul;58(Pt 7):1085-91. Epub 2002, Jun 20. PMID:12077426<ref>PMID:12077426</ref>

-	~~===Ultra-high resolution structure~~ of ~~HiPIP from Thermochromatium tepidum===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_12077426}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[1iua]] is a 1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Thermochromatium_tepidum Thermochromatium tepidum]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=1IUA OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:012077426<~~/~~ref~~><~~ref group="xtra">PMID:018754631</ref><references group="xtra"~~/>	+
	[[Category: Thermochromatium tepidum]]		[[Category: Thermochromatium tepidum]]
	[[Category: Kobayashi, M.]]		[[Category: Kobayashi, M.]]

OCA: Protected "1iua" [edit=sysop:move=sysop]

OCA — Wed, 28 Nov 2012 15:18:00 GMT

Protected "1iua" [edit=sysop:move=sysop]

←Older revision

Revision as of 15:18, 28 November 2012

OCA at 15:17, 28 November 2012

OCA — Wed, 28 Nov 2012 15:17:57 GMT

←Older revision		Revision as of 15:17, 28 November 2012
Line 1:		Line 1:
-	{{Seed}}
	[[Image:1iua.png\|left\|200px]]		[[Image:1iua.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1iua", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_1iua\| PDB=1iua \| SCENE= }}		{{STRUCTURE_1iua\| PDB=1iua \| SCENE= }}

	===Ultra-high resolution structure of HiPIP from Thermochromatium tepidum===		===Ultra-high resolution structure of HiPIP from Thermochromatium tepidum===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_12077426}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 12077426 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_12077426}}		{{ABSTRACT_PUBMED_12077426}}

	==About this Structure==		==About this Structure==
-	~~1IUA~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Thermochromatium_tepidum Thermochromatium tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IUA OCA].	+	[[1iua]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermochromatium_tepidum Thermochromatium tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IUA OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~12077426~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:012077426</ref><ref group="xtra">PMID:018754631</ref><references group="xtra"/>
	[[Category: Thermochromatium tepidum]]		[[Category: Thermochromatium tepidum]]
	[[Category: Kobayashi, M.]]		[[Category: Kobayashi, M.]]
Line 30:		Line 18:
	[[Category: Nogi, T.]]		[[Category: Nogi, T.]]
	[[Category: Nozawa, T.]]		[[Category: Nozawa, T.]]
-	[[Category: ~~Crystal structure~~]]	+	[[Category: Electron transport]]
	[[Category: Hipip]]		[[Category: Hipip]]
-	[[Category: Ultra-high resolution]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 11:47:34 2009''