1j4u - Revision history

OCA at 23:42, 27 December 2023

OCA — Wed, 27 Dec 2023 23:42:28 GMT

←Older revision		Revision as of 23:42, 27 December 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1j4u]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Artocarpus_integer Artocarpus integer]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J4U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J4U FirstGlance]. <br>		<table><tr><td colspan='2'>[[1j4u]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Artocarpus_integer Artocarpus integer]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J4U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J4U FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=MMA:O1~~-~~METHYL-MANNOSE'>MMA</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.9Å</td></tr>
-	<tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=AYA:N-ACETYLALANINE'>AYA</scene><~~/td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AYA:N-ACETYLALANINE'>AYA</scene>, <scene name='pdbligand=MMA:O1-METHYL-MANNOSE'>MMA</scene></td></tr>
-	~~<tr id~~='~~related'><td class~~=~~"sblockLbl"><b>[[Related_structure\|Related~~:~~]]</b></td><td class="sblockDat"><div style='overflow: auto; max~~-~~height: 3em;~~'>~~[[1jac\|1jac]], [[1j4s\|1j4s]], [[1j4t\|1j4t]]~~</~~div~~></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j4u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j4u OCA], [https://pdbe.org/1j4u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j4u RCSB], [https://www.ebi.ac.uk/pdbsum/1j4u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j4u ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j4u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j4u OCA], [https://pdbe.org/1j4u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j4u RCSB], [https://www.ebi.ac.uk/pdbsum/1j4u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j4u ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q7M1T4_ARTIN Q7M1T4_ARTIN]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 34:		Line 35:
	[[Category: Artocarpus integer]]		[[Category: Artocarpus integer]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Jeyaprakash~~, A A~~]]	+	[[Category: Jeyaprakash AA]]
-	[[Category: Pratap~~, J V~~]]	+	[[Category: Pratap JV]]
-	[[Category: Rani~~, P G~~]]	+	[[Category: Rani PG]]
-	[[Category: Sekar, K]]	+	[[Category: Sekar K]]
-	[[Category: Surolia, A]]	+	[[Category: Surolia A]]
-	[[Category: Vijayan, M]]	+	[[Category: Vijayan M]]
-	~~[[Category: All beta]]~~	+
-	~~[[Category: Beta prism i fold]]~~	+
-	~~[[Category: Greek key motif]]~~	+
-	~~[[Category: Plant protein~~]]	+

OCA at 11:10, 4 August 2021

OCA — Wed, 04 Aug 2021 11:10:53 GMT

←Older revision		Revision as of 11:10, 4 August 2021
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	<StructureSection load='1j4u' size='340' side='right'caption='[[1j4u]], [[Resolution\|resolution]] 2.90Å' scene=''>		<StructureSection load='1j4u' size='340' side='right'caption='[[1j4u]], [[Resolution\|resolution]] 2.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1j4u]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Artocarpus_integer Artocarpus integer]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J4U OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1J4U FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1j4u]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Artocarpus_integer Artocarpus integer]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J4U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J4U FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MMA:O1-METHYL-MANNOSE'>MMA</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MMA:O1-METHYL-MANNOSE'>MMA</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=AYA:N-ACETYLALANINE'>AYA</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=AYA:N-ACETYLALANINE'>AYA</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1jac\|1jac]], [[1j4s\|1j4s]], [[1j4t\|1j4t]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1jac\|1jac]], [[1j4s\|1j4s]], [[1j4t\|1j4t]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1j4u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j4u OCA], [~~http~~://pdbe.org/1j4u PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1j4u RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1j4u PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1j4u ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j4u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j4u OCA], [https://pdbe.org/1j4u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j4u RCSB], [https://www.ebi.ac.uk/pdbsum/1j4u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j4u ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 10:13, 30 October 2019

OCA — Wed, 30 Oct 2019 10:13:29 GMT

←Older revision		Revision as of 10:13, 30 October 2019
Line 1:		Line 1:

	==Structure of Artocarpin Complexed with Me-alpha-Mannose==		==Structure of Artocarpin Complexed with Me-alpha-Mannose==
-	<StructureSection load='1j4u' size='340' side='right' caption='[[1j4u]], [[Resolution\|resolution]] 2.90Å' scene=''>	+	<StructureSection load='1j4u' size='340' side='right'caption='[[1j4u]], [[Resolution\|resolution]] 2.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1j4u]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Artocarpus_integer Artocarpus integer]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J4U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1J4U FirstGlance]. <br>		<table><tr><td colspan='2'>[[1j4u]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Artocarpus_integer Artocarpus integer]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J4U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1J4U FirstGlance]. <br>
Line 33:		Line 33:
	</StructureSection>		</StructureSection>
	[[Category: Artocarpus integer]]		[[Category: Artocarpus integer]]
		+	[[Category: Large Structures]]
	[[Category: Jeyaprakash, A A]]		[[Category: Jeyaprakash, A A]]
	[[Category: Pratap, J V]]		[[Category: Pratap, J V]]

OCA at 08:58, 17 January 2018

OCA — Wed, 17 Jan 2018 08:58:56 GMT

←Older revision		Revision as of 08:58, 17 January 2018
Line 1:		Line 1:
		+
	==Structure of Artocarpin Complexed with Me-alpha-Mannose==		==Structure of Artocarpin Complexed with Me-alpha-Mannose==
	<StructureSection load='1j4u' size='340' side='right' caption='[[1j4u]], [[Resolution\|resolution]] 2.90Å' scene=''>		<StructureSection load='1j4u' size='340' side='right' caption='[[1j4u]], [[Resolution\|resolution]] 2.90Å' scene=''>
Line 6:		Line 7:
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=AYA:N-ACETYLALANINE'>AYA</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=AYA:N-ACETYLALANINE'>AYA</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1jac\|1jac]], [[1j4s\|1j4s]], [[1j4t\|1j4t]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1jac\|1jac]], [[1j4s\|1j4s]], [[1j4t\|1j4t]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1j4u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j4u OCA], [http://pdbe.org/1j4u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1j4u RCSB], [http://www.ebi.ac.uk/pdbsum/1j4u PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1j4u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j4u OCA], [http://pdbe.org/1j4u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1j4u RCSB], [http://www.ebi.ac.uk/pdbsum/1j4u PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1j4u ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 12:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j4/1j4u_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j4/1j4u_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 11:31, 8 February 2016

OCA — Mon, 08 Feb 2016 11:31:50 GMT

←Older revision		Revision as of 11:31, 8 February 2016
Line 16:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1j4u ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 11:07, 10 September 2015

OCA — Thu, 10 Sep 2015 11:07:53 GMT

←Older revision		Revision as of 11:07, 10 September 2015
Line 6:		Line 6:
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=AYA:N-ACETYLALANINE'>AYA</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=AYA:N-ACETYLALANINE'>AYA</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1jac\|1jac]], [[1j4s\|1j4s]], [[1j4t\|1j4t]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1jac\|1jac]], [[1j4s\|1j4s]], [[1j4t\|1j4t]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1j4u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j4u OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1j4u RCSB], [http://www.ebi.ac.uk/pdbsum/1j4u PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1j4u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j4u OCA], [http://pdbe.org/1j4u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1j4u RCSB], [http://www.ebi.ac.uk/pdbsum/1j4u PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 26:		Line 26:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1j4u" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 11:58, 2 January 2015

OCA — Fri, 02 Jan 2015 11:58:54 GMT

←Older revision		Revision as of 11:58, 2 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1j4u]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Artocarpus_integer Artocarpus integer]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J4U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1J4U FirstGlance]. <br>		<table><tr><td colspan='2'>[[1j4u]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Artocarpus_integer Artocarpus integer]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J4U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1J4U FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MMA:O1-METHYL-MANNOSE'>MMA</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MMA:O1-METHYL-MANNOSE'>MMA</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=AYA:N-ACETYLALANINE'>AYA</scene></td></tr>	+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=AYA:N-ACETYLALANINE'>AYA</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1jac\|1jac]], [[1j4s\|1j4s]], [[1j4t\|1j4t]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1jac\|1jac]], [[1j4s\|1j4s]], [[1j4t\|1j4t]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1j4u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j4u OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1j4u RCSB], [http://www.ebi.ac.uk/pdbsum/1j4u PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1j4u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j4u OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1j4u RCSB], [http://www.ebi.ac.uk/pdbsum/1j4u PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 31:		Line 31:
	</StructureSection>		</StructureSection>
	[[Category: Artocarpus integer]]		[[Category: Artocarpus integer]]
-	[[Category: Jeyaprakash, A A.]]	+	[[Category: Jeyaprakash, A A]]
-	[[Category: Pratap, J V.]]	+	[[Category: Pratap, J V]]
-	[[Category: Rani, P G.]]	+	[[Category: Rani, P G]]
-	[[Category: Sekar, K.]]	+	[[Category: Sekar, K]]
-	[[Category: Surolia, A.]]	+	[[Category: Surolia, A]]
-	[[Category: Vijayan, M.]]	+	[[Category: Vijayan, M]]
	[[Category: All beta]]		[[Category: All beta]]
	[[Category: Beta prism i fold]]		[[Category: Beta prism i fold]]
	[[Category: Greek key motif]]		[[Category: Greek key motif]]
	[[Category: Plant protein]]		[[Category: Plant protein]]

OCA at 09:26, 28 September 2014

OCA — Sun, 28 Sep 2014 09:26:49 GMT

←Older revision		Revision as of 09:26, 28 September 2014
Line 1:		Line 1:
-	[[~~Image:~~1j4u.~~png~~\|~~left~~\|200px]]	+	==Structure of Artocarpin Complexed with Me-alpha-Mannose==
		+	<StructureSection load='1j4u' size='340' side='right' caption='[[1j4u]], [[Resolution\|resolution]] 2.90Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1j4u]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Artocarpus_integer Artocarpus integer]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J4U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1J4U FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MMA:O1-METHYL-MANNOSE'>MMA</scene><br>
		+	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=AYA:N-ACETYLALANINE'>AYA</scene></td></tr>
		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1jac\|1jac]], [[1j4s\|1j4s]], [[1j4t\|1j4t]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1j4u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j4u OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1j4u RCSB], [http://www.ebi.ac.uk/pdbsum/1j4u PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j4/1j4u_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The seeds of jack fruit (Artocarpus integrifolia) contain two tetrameric lectins, jacalin and artocarpin. Jacalin was the first lectin found to exhibit the beta-prism I fold, which is characteristic of the Moraceae plant lectin family. Jacalin contains two polypeptide chains produced by a post-translational proteolysis which has been shown to be crucial for generating its specificity for galactose. Artocarpin is a single chain protein with considerable sequence similarity with jacalin. It, however, exhibits many properties different from those of jacalin. In particular, it is specific to mannose. The structures of two crystal forms, form I and form II, of the native lectin have been determined at 2.4 and 2.5 A resolution, respectively. The structure of the lectin complexed with methyl-alpha-mannose, has also been determined at 2.9 A resolution. The structure is similar to jacalin, although differences exist in details. The crystal structures and detailed modelling studies indicate that the following differences between the carbohydrate binding sites of artocarpin and jacalin are responsible for the difference in the specificities of the two lectins. Firstly, artocarpin does not contain, unlike jacalin, an N terminus generated by post-translational proteolysis. Secondly, there is no aromatic residue in the binding site of artocarpin whereas there are four in that of jacalin. A comparison with similar lectins of known structures or sequences, suggests that, in general, stacking interactions with aromatic residues are important for the binding of galactose while such interactions are usually absent in the carbohydrate binding sites of mannose-specific lectins with the beta-prism I fold.

-	~~{{STRUCTURE_1j4u\| PDB=1j4u \| SCENE= }}~~	+	Crystal structures of artocarpin, a Moraceae lectin with mannose specificity, and its complex with methyl-alpha-D-mannose: implications to the generation of carbohydrate specificity.,Pratap JV, Jeyaprakash AA, Rani PG, Sekar K, Surolia A, Vijayan M J Mol Biol. 2002 Mar 22;317(2):237-47. PMID:11902840<ref>PMID:11902840</ref>

-	~~===Structure~~ of ~~Artocarpin Complexed with Me-alpha-Mannose===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_11902840}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[1j4u]] is a 4 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Artocarpus_integer Artocarpus integer]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=1J4U OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:011902840<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Artocarpus integer]]		[[Category: Artocarpus integer]]
	[[Category: Jeyaprakash, A A.]]		[[Category: Jeyaprakash, A A.]]

OCA: Protected "1j4u" [edit=sysop:move=sysop]

OCA — Wed, 28 Nov 2012 14:48:29 GMT

Protected "1j4u" [edit=sysop:move=sysop]

←Older revision

Revision as of 14:48, 28 November 2012

OCA at 14:48, 28 November 2012

OCA — Wed, 28 Nov 2012 14:48:26 GMT

←Older revision		Revision as of 14:48, 28 November 2012
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-	{{Seed}}
	[[Image:1j4u.png\|left\|200px]]		[[Image:1j4u.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1j4u", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_1j4u\| PDB=1j4u \| SCENE= }}		{{STRUCTURE_1j4u\| PDB=1j4u \| SCENE= }}

	===Structure of Artocarpin Complexed with Me-alpha-Mannose===		===Structure of Artocarpin Complexed with Me-alpha-Mannose===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_11902840}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 11902840 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_11902840}}		{{ABSTRACT_PUBMED_11902840}}

	==About this Structure==		==About this Structure==
-	~~1J4U~~ is a 4 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Artocarpus_integer Artocarpus integer]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J4U OCA].	+	[[1j4u]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Artocarpus_integer Artocarpus integer]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J4U OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~11902840~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:011902840</ref><references group="xtra"/>
	[[Category: Artocarpus integer]]		[[Category: Artocarpus integer]]
	[[Category: Jeyaprakash, A A.]]		[[Category: Jeyaprakash, A A.]]
Line 34:		Line 22:
	[[Category: Beta prism i fold]]		[[Category: Beta prism i fold]]
	[[Category: Greek key motif]]		[[Category: Greek key motif]]
-		+	[[Category: Plant protein]]
-	~~''Page seeded by~~ [~~http~~:~~//oca.weizmann.ac.il/oca OCA~~ ] ~~on Mon Feb 16 21:40:34 2009''~~	+