1kbx - Revision history

OCA at 06:51, 11 August 2021

OCA — Wed, 11 Aug 2021 06:51:48 GMT

←Older revision		Revision as of 06:51, 11 August 2021
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	<StructureSection load='1kbx' size='340' side='right'caption='[[1kbx]]' scene=''>		<StructureSection load='1kbx' size='340' side='right'caption='[[1kbx]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1KBX FirstGlance]. <br>	+	<table><tr><td colspan='2'>For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KBX FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1kbx FirstGlance], [~~http~~://www.ebi.ac.uk/pdbsum/1kbx PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1kbx ProSAT]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1kbx FirstGlance], [https://www.ebi.ac.uk/pdbsum/1kbx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1kbx ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 09:21, 6 November 2019

OCA — Wed, 06 Nov 2019 09:21:54 GMT

←Older revision		Revision as of 09:21, 6 November 2019
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	==PLASMODIUM CHABAUDI CHABAUDI ASPARTIC PROTEINASE==		==PLASMODIUM CHABAUDI CHABAUDI ASPARTIC PROTEINASE==
-	<StructureSection load='1kbx' size='340' side='right' caption='[[1kbx]]' scene=''>	+	<StructureSection load='1kbx' size='340' side='right'caption='[[1kbx]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1KBX FirstGlance]. <br>		<table><tr><td colspan='2'>For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1KBX FirstGlance]. <br>
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	</StructureSection>		</StructureSection>
	[[Category: Theoretical Model]]		[[Category: Theoretical Model]]
		+	[[Category: Large Structures]]
	[[Category: Do Rosario, V E]]		[[Category: Do Rosario, V E]]
	[[Category: Domingos, A]]		[[Category: Domingos, A]]
	[[Category: Martins, T M]]		[[Category: Martins, T M]]
	[[Category: Novo, C]]		[[Category: Novo, C]]

OCA at 21:30, 24 January 2018

OCA — Wed, 24 Jan 2018 21:30:31 GMT

←Older revision		Revision as of 21:30, 24 January 2018
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1KBX FirstGlance]. <br>		<table><tr><td colspan='2'>For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1KBX FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1kbx FirstGlance], [http://www.ebi.ac.uk/pdbsum/1kbx PDBsum]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1kbx FirstGlance], [http://www.ebi.ac.uk/pdbsum/1kbx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1kbx ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 09:10, 11 February 2016

OCA — Thu, 11 Feb 2016 09:10:04 GMT

←Older revision		Revision as of 09:10, 11 February 2016
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		+	{{Theoretical_model}}
		+
	==PLASMODIUM CHABAUDI CHABAUDI ASPARTIC PROTEINASE==		==PLASMODIUM CHABAUDI CHABAUDI ASPARTIC PROTEINASE==
	<StructureSection load='1kbx' size='340' side='right' caption='[[1kbx]]' scene=''>		<StructureSection load='1kbx' size='340' side='right' caption='[[1kbx]]' scene=''>
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Theoretical Model]]
	[[Category: Do Rosario, V E]]		[[Category: Do Rosario, V E]]
	[[Category: Domingos, A]]		[[Category: Domingos, A]]
	[[Category: Martins, T M]]		[[Category: Martins, T M]]
	[[Category: Novo, C]]		[[Category: Novo, C]]

OCA at 21:59, 9 September 2015

OCA — Wed, 09 Sep 2015 21:59:51 GMT

←Older revision		Revision as of 21:59, 9 September 2015
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1kbx" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 16:43, 5 January 2015

OCA — Mon, 05 Jan 2015 16:43:02 GMT

←Older revision		Revision as of 16:43, 5 January 2015
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1KBX FirstGlance]. <br>		<table><tr><td colspan='2'>For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1KBX FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1kbx FirstGlance], [http://www.ebi.ac.uk/pdbsum/1kbx PDBsum]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1kbx FirstGlance], [http://www.ebi.ac.uk/pdbsum/1kbx PDBsum]</span></td></tr>
-	<table>	+	</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==

OCA at 09:26, 28 September 2014

OCA — Sun, 28 Sep 2014 09:26:01 GMT

←Older revision		Revision as of 09:26, 28 September 2014
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-	~~{{Theoretical_model}}~~	+	==PLASMODIUM CHABAUDI CHABAUDI ASPARTIC PROTEINASE==
		+	<StructureSection load='1kbx' size='340' side='right' caption='[[1kbx]]' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1KBX FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1kbx FirstGlance], [http://www.ebi.ac.uk/pdbsum/1kbx PDBsum]</span></td></tr>
		+	<table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Intraerythrocytic malaria parasites degrade haemoglobin to provide nutrients for their own growth and maturation. Plasmodium aspartic proteases known as plasmepsins play an important role on haemoglobin degradation and are being studied as drug targets for chemotherapy of malaria. The rodent model for human malaria, Plasmodium chabaudi, is an experimentally good model for therapy drug design. The gene encoding an aspartic protease precursor (proplasmepsin) from the rodent malaria parasite P. chabaudi was cloned and sequenced. A theoretical 3D structure model was constructed by comparative homology and used for superimposition with other known models. Analysis of the P. chabaudi and Plasmodium yoelli genomes revealed in both the presence of at least seven plasmepsins and each one has sequence similarity to its plasmepsin counterpart of the human malaria Plasmodium falciparum. The predicted proteins were confirmed as plasmepsins by detection on Blocks Database of three characteristic blocks of the eukaryotic and viral aspartic protease family. Analysis of the proline-rich loop amino acid sequence of these plasmepsins suggests that they constitute characteristic motifs of each plasmepsin group suggesting that these sequence variations are related with different substrate specificities.

-	~~[[Image~~:~~1kbx~~.~~png\|left\|200px]]~~	+	Aspartic proteases from Plasmodium chabaudi: a rodent model for human malaria.,Martins TM, Novo C, do Rosario VE, Domingos A Acta Trop. 2003 Dec;89(1):1-12. PMID:14636976<ref>PMID:14636976</ref>

-	~~{{STRUCTURE_1kbx\| PDB=1kbx \| SCENE= }}~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	==~~=PLASMODIUM CHABAUDI CHABAUDI ASPARTIC PROTEINASE===~~	+	== References ==
-		+	<references/>
-	~~{{ABSTRACT_PUBMED_14636976}}~~	+	__TOC__
-		+	</StructureSection>
-	~~==Reference~~==	+
-	<~~ref group="xtra">PMID:014636976<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Do Rosario, V E]]		[[Category: Do Rosario, V E]]
	[[Category: Domingos, A]]		[[Category: Domingos, A]]
	[[Category: Martins, T M]]		[[Category: Martins, T M]]
	[[Category: Novo, C]]		[[Category: Novo, C]]

OCA: Protected "1kbx" [edit=sysop:move=sysop]

OCA — Sun, 21 Oct 2012 09:43:43 GMT

Protected "1kbx" [edit=sysop:move=sysop]

←Older revision

Revision as of 09:43, 21 October 2012

OCA at 09:43, 21 October 2012

OCA — Sun, 21 Oct 2012 09:43:41 GMT

←Older revision		Revision as of 09:43, 21 October 2012
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	{{Theoretical_model}}		{{Theoretical_model}}
-	~~{{Seed}}~~	+
	[[Image:1kbx.png\|left\|200px]]		[[Image:1kbx.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1kbx", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_1kbx\| PDB=1kbx \| SCENE= }}		{{STRUCTURE_1kbx\| PDB=1kbx \| SCENE= }}

	===PLASMODIUM CHABAUDI CHABAUDI ASPARTIC PROTEINASE===		===PLASMODIUM CHABAUDI CHABAUDI ASPARTIC PROTEINASE===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_14636976}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 14636976 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_14636976}}		{{ABSTRACT_PUBMED_14636976}}
-
-	==About this Structure==
-	Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KBX OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~14636976~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:014636976</ref><references group="xtra"/>
	[[Category: Do Rosario, V E]]		[[Category: Do Rosario, V E]]
	[[Category: Domingos, A]]		[[Category: Domingos, A]]
	[[Category: Martins, T M]]		[[Category: Martins, T M]]
	[[Category: Novo, C]]		[[Category: Novo, C]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Apr 8 08:51:56 2010''

OCA at 05:51, 8 April 2010

OCA — Thu, 08 Apr 2010 05:51:57 GMT

←Older revision		Revision as of 05:51, 8 April 2010
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-	~~'''Theoretical Model'''~~	+	{{Theoretical_model}}
		+	{{Seed}}
		+	[[Image:1kbx.png\|left\|200px]]

-	The ~~entry 1KBX~~ is ~~a Theoretical Model titled 'Plasmodium chabaudi chabaudi Aspartic proteinase'~~.	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_1kbx", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_1kbx\| PDB=1kbx \| SCENE= }}

-	~~[[Category:Theoretical Model]]~~	+	===PLASMODIUM CHABAUDI CHABAUDI ASPARTIC PROTEINASE===


-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Wed Jul 30 09~~:50:~~35 2008~~''	+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_14636976}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 14636976 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_14636976}}
		+
		+	==About this Structure==
		+	Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KBX OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:14636976</ref><references group="xtra"/>
		+	[[Category: Do Rosario, V E]]
		+	[[Category: Domingos, A]]
		+	[[Category: Martins, T M]]
		+	[[Category: Novo, C]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Apr 8 08:51:56 2010''