1lkz - Revision history

OCA at 08:24, 10 April 2024

OCA — Wed, 10 Apr 2024 08:24:44 GMT

←Older revision		Revision as of 08:24, 10 April 2024
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	<StructureSection load='1lkz' size='340' side='right'caption='[[1lkz]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='1lkz' size='340' side='right'caption='[[1lkz]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1lkz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~"bacillus_coli"_migula_1895 "bacillus~~ coli~~" migula 1895~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LKZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LKZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1lkz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LKZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LKZ FirstGlance]. <br>
-	</td></tr><tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"~~><scene name~~=~~'pdbligand=MSE:SELENOMETHIONINE'>MSE</scene~~></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.5Å</td></tr>
-	<tr id='~~activity~~'><td class="sblockLbl"><b>~~Activity~~:</b></td><td class="sblockDat"><~~span class~~='~~plainlinks~~'>~~[https://en.wikipedia.org/wiki/Ribose-5-phosphate_isomerase Ribose-5-phosphate isomerase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.6 5.3.1.6]~~ </~~span~~></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lkz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lkz OCA], [https://pdbe.org/1lkz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lkz RCSB], [https://www.ebi.ac.uk/pdbsum/1lkz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lkz ProSAT], [https://www.topsan.org/Proteins/BSGI/1lkz TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lkz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lkz OCA], [https://pdbe.org/1lkz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lkz RCSB], [https://www.ebi.ac.uk/pdbsum/1lkz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lkz ProSAT], [https://www.topsan.org/Proteins/BSGI/1lkz TOPSAN]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/RPIA_ECOLI RPIA_ECOLI]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bacillus~~ coli ~~migula 1895~~]]	+	[[Category: Escherichia coli]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	~~[[Category: Ribose-5-phosphate isomerase]]~~	+	[[Category: Cygler M]]
-	~~[[Category: Structural genomic]]~~	+	[[Category: Matte A]]
-	[[Category: Cygler, M]]	+	[[Category: Rangarajan ES]]
-	[[Category: Matte, A]]	+	[[Category: Sivaraman J]]
-	[[Category: Rangarajan~~, E S~~]]	+
-	[[Category: Sivaraman, J]]	+
-	~~[[Category: Bsgi]]~~	+
-	~~[[Category: Isomerase]]~~	+
-	~~[[Category: Ribose phosphate isomerase]]~~	+
-	~~[[Category: Rpia~~]]	+

OCA at 08:52, 21 April 2021

OCA — Wed, 21 Apr 2021 08:52:45 GMT

←Older revision		Revision as of 08:52, 21 April 2021
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	<StructureSection load='1lkz' size='340' side='right'caption='[[1lkz]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='1lkz' size='340' side='right'caption='[[1lkz]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1lkz]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LKZ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1LKZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1lkz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LKZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LKZ FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Ribose-5-phosphate_isomerase Ribose-5-phosphate isomerase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.6 5.3.1.6] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Ribose-5-phosphate_isomerase Ribose-5-phosphate isomerase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.6 5.3.1.6] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1lkz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lkz OCA], [~~http~~://pdbe.org/1lkz PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1lkz RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1lkz PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1lkz ProSAT], [~~http~~://www.topsan.org/Proteins/BSGI/1lkz TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lkz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lkz OCA], [https://pdbe.org/1lkz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lkz RCSB], [https://www.ebi.ac.uk/pdbsum/1lkz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lkz ProSAT], [https://www.topsan.org/Proteins/BSGI/1lkz TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 20:		Line 20:

	==See Also==		==See Also==
-	*[[Ribose-5-phosphate isomerase\|Ribose-5-phosphate isomerase]]	+	*[[Ribose-5-phosphate isomerase 3D structures\|Ribose-5-phosphate isomerase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 13:26, 17 July 2019

OCA — Wed, 17 Jul 2019 13:26:38 GMT

←Older revision		Revision as of 13:26, 17 July 2019
Line 1:		Line 1:

	==Crystal structure of D-ribose-5-phosphate isomerase (RpiA) from Escherichia coli.==		==Crystal structure of D-ribose-5-phosphate isomerase (RpiA) from Escherichia coli.==
-	<StructureSection load='1lkz' size='340' side='right' caption='[[1lkz]], [[Resolution\|resolution]] 2.50Å' scene=''>	+	<StructureSection load='1lkz' size='340' side='right'caption='[[1lkz]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1lkz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LKZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1LKZ FirstGlance]. <br>		<table><tr><td colspan='2'>[[1lkz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LKZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1LKZ FirstGlance]. <br>
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	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lk/1lkz_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lk/1lkz_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 18:		Line 18:
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lkz ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lkz ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
		+
		+	==See Also==
		+	*[[Ribose-5-phosphate isomerase\|Ribose-5-phosphate isomerase]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Bacillus coli migula 1895]]		[[Category: Bacillus coli migula 1895]]
		+	[[Category: Large Structures]]
	[[Category: Ribose-5-phosphate isomerase]]		[[Category: Ribose-5-phosphate isomerase]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]

OCA at 13:55, 12 October 2017

OCA — Thu, 12 Oct 2017 13:55:40 GMT

←Older revision		Revision as of 13:55, 12 October 2017
Line 1:		Line 1:
		+
	==Crystal structure of D-ribose-5-phosphate isomerase (RpiA) from Escherichia coli.==		==Crystal structure of D-ribose-5-phosphate isomerase (RpiA) from Escherichia coli.==
	<StructureSection load='1lkz' size='340' side='right' caption='[[1lkz]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='1lkz' size='340' side='right' caption='[[1lkz]], [[Resolution\|resolution]] 2.50Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribose-5-phosphate_isomerase Ribose-5-phosphate isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.6 5.3.1.6] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribose-5-phosphate_isomerase Ribose-5-phosphate isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.6 5.3.1.6] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lkz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lkz OCA], [http://pdbe.org/1lkz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1lkz RCSB], [http://www.ebi.ac.uk/pdbsum/1lkz PDBsum], [http://www.topsan.org/Proteins/BSGI/1lkz TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lkz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lkz OCA], [http://pdbe.org/1lkz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1lkz RCSB], [http://www.ebi.ac.uk/pdbsum/1lkz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1lkz ProSAT], [http://www.topsan.org/Proteins/BSGI/1lkz TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lkz ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lkz ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
-
-	==See Also==
-	*[[Ribose-5-phosphate isomerase\|Ribose-5-phosphate isomerase]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 15:20, 7 February 2016

OCA — Sun, 07 Feb 2016 15:20:15 GMT

←Older revision		Revision as of 15:20, 7 February 2016
Line 15:		Line 15:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lkz ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>

OCA at 02:44, 10 September 2015

OCA — Thu, 10 Sep 2015 02:44:26 GMT

←Older revision		Revision as of 02:44, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='1lkz' size='340' side='right' caption='[[1lkz]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='1lkz' size='340' side='right' caption='[[1lkz]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1lkz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Escherichia_coli Escherichia~~ coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LKZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1LKZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1lkz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LKZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1LKZ FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribose-5-phosphate_isomerase Ribose-5-phosphate isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.6 5.3.1.6] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribose-5-phosphate_isomerase Ribose-5-phosphate isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.6 5.3.1.6] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lkz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lkz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1lkz RCSB], [http://www.ebi.ac.uk/pdbsum/1lkz PDBsum], [http://www.topsan.org/Proteins/BSGI/1lkz TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lkz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lkz OCA], [http://pdbe.org/1lkz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1lkz RCSB], [http://www.ebi.ac.uk/pdbsum/1lkz PDBsum], [http://www.topsan.org/Proteins/BSGI/1lkz TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 22:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Escherichia~~ coli]]	+	[[Category: Bacillus coli migula 1895]]
	[[Category: Ribose-5-phosphate isomerase]]		[[Category: Ribose-5-phosphate isomerase]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]

OCA at 15:55, 5 January 2015

OCA — Mon, 05 Jan 2015 15:55:09 GMT

←Older revision		Revision as of 15:55, 5 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1lkz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LKZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1LKZ FirstGlance]. <br>		<table><tr><td colspan='2'>[[1lkz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LKZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1LKZ FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribose-5-phosphate_isomerase Ribose-5-phosphate isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.6 5.3.1.6] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribose-5-phosphate_isomerase Ribose-5-phosphate isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.6 5.3.1.6] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lkz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lkz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1lkz RCSB], [http://www.ebi.ac.uk/pdbsum/1lkz PDBsum], [http://www.topsan.org/Proteins/BSGI/1lkz TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lkz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lkz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1lkz RCSB], [http://www.ebi.ac.uk/pdbsum/1lkz PDBsum], [http://www.topsan.org/Proteins/BSGI/1lkz TOPSAN]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 24:		Line 24:
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Ribose-5-phosphate isomerase]]		[[Category: Ribose-5-phosphate isomerase]]
-	[[Category: ~~BSGI, Montreal-Kingston Bacterial~~ Structural ~~Genomics Initiative.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Cygler, M.]]	+	[[Category: Cygler, M]]
-	[[Category: Matte, A.]]	+	[[Category: Matte, A]]
-	[[Category: Rangarajan, E S.]]	+	[[Category: Rangarajan, E S]]
-	[[Category: Sivaraman, J.]]	+	[[Category: Sivaraman, J]]
	[[Category: Bsgi]]		[[Category: Bsgi]]
	[[Category: Isomerase]]		[[Category: Isomerase]]
-	[[Category: Montreal-kingston bacterial structural genomics initiative]]
	[[Category: Ribose phosphate isomerase]]		[[Category: Ribose phosphate isomerase]]
	[[Category: Rpia]]		[[Category: Rpia]]
-	[[Category: Structural genomic]]

OCA at 17:07, 28 September 2014

OCA — Sun, 28 Sep 2014 17:07:01 GMT

←Older revision		Revision as of 17:07, 28 September 2014
Line 1:		Line 1:
-	[[~~Image~~:1lkz.~~png\|left~~\|200px]]	+	==Crystal structure of D-ribose-5-phosphate isomerase (RpiA) from Escherichia coli.==
		+	<StructureSection load='1lkz' size='340' side='right' caption='[[1lkz]], [[Resolution\|resolution]] 2.50Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1lkz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LKZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1LKZ FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribose-5-phosphate_isomerase Ribose-5-phosphate isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.6 5.3.1.6] </span></td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lkz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lkz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1lkz RCSB], [http://www.ebi.ac.uk/pdbsum/1lkz PDBsum], [http://www.topsan.org/Proteins/BSGI/1lkz TOPSAN]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lk/1lkz_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>

-	~~{{STRUCTURE_1lkz\| PDB~~=~~1lkz \| SCENE~~= }}	+	==See Also==
-		+	*[[Ribose-5-phosphate isomerase\|Ribose-5-phosphate isomerase]]
-	==~~=Crystal structure of D~~-~~ribose~~-5-phosphate isomerase ~~(RpiA) from Escherichia coli.===~~	+	__TOC__
-		+	</StructureSection>
-		+
-	~~==About this Structure==~~	+
-	~~[[1lkz~~]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LKZ OCA].	+
-		+
-	~~==Reference==~~	+
-	<~~ref group="xtra">PMID:012211039</ref><ref group="xtra">PMID:015281135</ref><references group="xtra"~~/>	+
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Ribose-5-phosphate isomerase]]		[[Category: Ribose-5-phosphate isomerase]]

OCA: Protected "1lkz" [edit=sysop:move=sysop]

OCA — Wed, 05 Dec 2012 20:09:04 GMT

Protected "1lkz" [edit=sysop:move=sysop]

←Older revision

Revision as of 20:09, 5 December 2012

OCA at 20:09, 5 December 2012

OCA — Wed, 05 Dec 2012 20:09:00 GMT

←Older revision		Revision as of 20:09, 5 December 2012
Line 1:		Line 1:
-	{{Seed}}
	[[Image:1lkz.png\|left\|200px]]		[[Image:1lkz.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1lkz", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_1lkz\| PDB=1lkz \| SCENE= }}		{{STRUCTURE_1lkz\| PDB=1lkz \| SCENE= }}

Line 14:		Line 7:

	==About this Structure==		==About this Structure==
-	~~1LKZ~~ is a 2 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LKZ OCA].	+	[[1lkz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LKZ OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~12211039~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:012211039</ref><ref group="xtra">PMID:015281135</ref><references group="xtra"/>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Ribose-5-phosphate isomerase]]		[[Category: Ribose-5-phosphate isomerase]]
Line 26:		Line 19:
	[[Category: Sivaraman, J.]]		[[Category: Sivaraman, J.]]
	[[Category: Bsgi]]		[[Category: Bsgi]]
-	[[Category: ~~Crystal structure~~]]	+	[[Category: Isomerase]]
	[[Category: Montreal-kingston bacterial structural genomics initiative]]		[[Category: Montreal-kingston bacterial structural genomics initiative]]
	[[Category: Ribose phosphate isomerase]]		[[Category: Ribose phosphate isomerase]]
	[[Category: Rpia]]		[[Category: Rpia]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 14:44:27 2009''