1lng - Revision history

OCA at 09:15, 16 August 2023

OCA — Wed, 16 Aug 2023 09:15:55 GMT

←Older revision		Revision as of 09:15, 16 August 2023
Line 3:		Line 3:
	<StructureSection load='1lng' size='340' side='right'caption='[[1lng]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='1lng' size='340' side='right'caption='[[1lng]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1lng]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/ ~~] and [https://en.wikipedia.org/wiki/Atcc_43067 Atcc 43067~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LNG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LNG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1lng]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LNG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LNG FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.3Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lng OCA], [https://pdbe.org/1lng PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lng RCSB], [https://www.ebi.ac.uk/pdbsum/1lng PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lng ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lng OCA], [https://pdbe.org/1lng PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lng RCSB], [https://www.ebi.ac.uk/pdbsum/1lng PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lng ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/SRP19_METJA SRP19_METJA]] Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP (By similarity).	+	[https://www.uniprot.org/uniprot/SRP19_METJA SRP19_METJA] Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP (By similarity).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 35:		Line 36:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Atcc 43067]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Hainzl, T~~]]	+	[[Category: Methanocaldococcus jannaschii]]
-	[[Category: ~~Huang, S~~]]	+	[[Category: Hainzl T]]
-	[[Category: ~~Sauer-Eriksson, A E~~]]	+	[[Category: Huang S]]
-	[[Category: ~~Protein~~-~~rna complex]]~~	+	[[Category: Sauer-Eriksson AE]]
-	~~[[Category: Signaling protein-rna complex~~]]	+

OCA at 05:54, 28 April 2021

OCA — Wed, 28 Apr 2021 05:54:57 GMT

←Older revision		Revision as of 05:54, 28 April 2021
Line 3:		Line 3:
	<StructureSection load='1lng' size='340' side='right'caption='[[1lng]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='1lng' size='340' side='right'caption='[[1lng]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1lng]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/ ] and [~~http~~://en.wikipedia.org/wiki/Atcc_43067 Atcc 43067]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LNG OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1LNG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1lng]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/ ] and [https://en.wikipedia.org/wiki/Atcc_43067 Atcc 43067]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LNG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LNG FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1lng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lng OCA], [~~http~~://pdbe.org/1lng PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1lng RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1lng PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1lng ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lng OCA], [https://pdbe.org/1lng PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lng RCSB], [https://www.ebi.ac.uk/pdbsum/1lng PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lng ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/SRP19_METJA SRP19_METJA]] Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP (By similarity).	+	[[https://www.uniprot.org/uniprot/SRP19_METJA SRP19_METJA]] Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP (By similarity).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 06:49, 24 July 2019

OCA — Wed, 24 Jul 2019 06:49:48 GMT

←Older revision		Revision as of 06:49, 24 July 2019
Line 1:		Line 1:

	==Crystal Structure of the SRP19-7S.S SRP RNA Complex of M. jannaschii==		==Crystal Structure of the SRP19-7S.S SRP RNA Complex of M. jannaschii==
-	<StructureSection load='1lng' size='340' side='right' caption='[[1lng]], [[Resolution\|resolution]] 2.30Å' scene=''>	+	<StructureSection load='1lng' size='340' side='right'caption='[[1lng]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1lng]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/ ] and [http://en.wikipedia.org/wiki/Atcc_43067 Atcc 43067]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LNG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1LNG FirstGlance]. <br>		<table><tr><td colspan='2'>[[1lng]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/ ] and [http://en.wikipedia.org/wiki/Atcc_43067 Atcc 43067]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LNG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1LNG FirstGlance]. <br>
Line 36:		Line 36:
	</StructureSection>		</StructureSection>
	[[Category: Atcc 43067]]		[[Category: Atcc 43067]]
		+	[[Category: Large Structures]]
	[[Category: Hainzl, T]]		[[Category: Hainzl, T]]
	[[Category: Huang, S]]		[[Category: Huang, S]]

OCA at 05:27, 8 March 2018

OCA — Thu, 08 Mar 2018 05:27:31 GMT

←Older revision		Revision as of 05:27, 8 March 2018
Line 28:		Line 28:
	</div>		</div>
	<div class="pdbe-citations 1lng" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 1lng" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Signal recognition particle protein\|Signal recognition particle protein]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 07:43, 31 January 2018

OCA — Wed, 31 Jan 2018 07:43:01 GMT

←Older revision		Revision as of 07:43, 31 January 2018
Line 1:		Line 1:
		+
	==Crystal Structure of the SRP19-7S.S SRP RNA Complex of M. jannaschii==		==Crystal Structure of the SRP19-7S.S SRP RNA Complex of M. jannaschii==
	<StructureSection load='1lng' size='340' side='right' caption='[[1lng]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='1lng' size='340' side='right' caption='[[1lng]], [[Resolution\|resolution]] 2.30Å' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[1lng]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/ ] and [http://en.wikipedia.org/wiki/Atcc_43067 Atcc 43067]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LNG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1LNG FirstGlance]. <br>		<table><tr><td colspan='2'>[[1lng]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/ ] and [http://en.wikipedia.org/wiki/Atcc_43067 Atcc 43067]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LNG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1LNG FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lng OCA], [http://pdbe.org/1lng PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1lng RCSB], [http://www.ebi.ac.uk/pdbsum/1lng PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lng OCA], [http://pdbe.org/1lng PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1lng RCSB], [http://www.ebi.ac.uk/pdbsum/1lng PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1lng ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 12:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ln/1lng_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ln/1lng_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 27:		Line 28:
	</div>		</div>
	<div class="pdbe-citations 1lng" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 1lng" style="background-color:#fffaf0;"></div>
-
-	==See Also==
-	*[[Signal recognition particle protein\|Signal recognition particle protein]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 21:41, 9 February 2016

OCA — Tue, 09 Feb 2016 21:41:39 GMT

←Older revision		Revision as of 21:41, 9 February 2016
Line 16:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lng ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 02:18, 11 September 2015

OCA — Fri, 11 Sep 2015 02:18:03 GMT

←Older revision		Revision as of 02:18, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='1lng' size='340' side='right' caption='[[1lng]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='1lng' size='340' side='right' caption='[[1lng]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1lng]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Methanocaldococcus_jannaschii Methanocaldococcus jannaschii~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LNG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1LNG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1lng]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/ ] and [http://en.wikipedia.org/wiki/Atcc_43067 Atcc 43067]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LNG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1LNG FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lng OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1lng RCSB], [http://www.ebi.ac.uk/pdbsum/1lng PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lng OCA], [http://pdbe.org/1lng PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1lng RCSB], [http://www.ebi.ac.uk/pdbsum/1lng PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 26:		Line 26:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1lng" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
Line 33:		Line 34:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Methanocaldococcus jannaschii~~]]	+	[[Category: Atcc 43067]]
	[[Category: Hainzl, T]]		[[Category: Hainzl, T]]
	[[Category: Huang, S]]		[[Category: Huang, S]]

OCA at 09:43, 25 December 2014

OCA — Thu, 25 Dec 2014 09:43:36 GMT

←Older revision		Revision as of 09:43, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1lng]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LNG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1LNG FirstGlance]. <br>		<table><tr><td colspan='2'>[[1lng]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LNG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1LNG FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lng OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1lng RCSB], [http://www.ebi.ac.uk/pdbsum/1lng PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lng OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1lng RCSB], [http://www.ebi.ac.uk/pdbsum/1lng PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/SRP19_METJA SRP19_METJA]] Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP (By similarity).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 32:		Line 34:
	</StructureSection>		</StructureSection>
	[[Category: Methanocaldococcus jannaschii]]		[[Category: Methanocaldococcus jannaschii]]
-	[[Category: Hainzl, T.]]	+	[[Category: Hainzl, T]]
-	[[Category: Huang, S.]]	+	[[Category: Huang, S]]
-	[[Category: Sauer-Eriksson, A E.]]	+	[[Category: Sauer-Eriksson, A E]]
	[[Category: Protein-rna complex]]		[[Category: Protein-rna complex]]
	[[Category: Signaling protein-rna complex]]		[[Category: Signaling protein-rna complex]]

OCA at 15:55, 28 September 2014

OCA — Sun, 28 Sep 2014 15:55:34 GMT

←Older revision		Revision as of 15:55, 28 September 2014
Line 1:		Line 1:
-	[[~~Image~~:1lng.~~png\|left~~\|200px]]	+	==Crystal Structure of the SRP19-7S.S SRP RNA Complex of M. jannaschii==
		+	<StructureSection load='1lng' size='340' side='right' caption='[[1lng]], [[Resolution\|resolution]] 2.30Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1lng]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LNG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1LNG FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lng OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1lng RCSB], [http://www.ebi.ac.uk/pdbsum/1lng PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ln/1lng_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The signal recognition particle (SRP) is a phylogenetically conserved ribonucleoprotein. It associates with ribosomes to mediate co-translational targeting of membrane and secretory proteins to biological membranes. In mammalian cells, the SRP consists of a 7S RNA and six protein components. The S domain of SRP comprises the 7S.S part of RNA bound to SRP19, SRP54 and the SRP68/72 heterodimer; SRP54 has the main role in recognizing signal sequences of nascent polypeptide chains and docking SRP to its receptor. During assembly of the SRP, binding of SRP19 precedes and promotes the association of SRP54 (refs 4, 5). Here we report the crystal structure at 2.3 A resolution of the complex formed between 7S.S RNA and SRP19 in the archaeon Methanococcus jannaschii. SRP19 bridges the tips of helices 6 and 8 of 7S.S RNA by forming an extensive network of direct protein RNA interactions. Helices 6 and 8 pack side by side; tertiary RNA interactions, which also involve the strictly conserved tetraloop bases, stabilize helix 8 in a conformation competent for SRP54 binding. The structure explains the role of SRP19 and provides a molecular framework for SRP54 binding and SRP assembly in Eukarya and Archaea.

-	~~{{STRUCTURE_1lng\| PDB=1lng \| SCENE= }}~~	+	Structure of the SRP19 RNA complex and implications for signal recognition particle assembly.,Hainzl T, Huang S, Sauer-Eriksson AE Nature. 2002 Jun 13;417(6890):767-71. Epub 2002 Jun 5. PMID:12050674<ref>PMID:12050674</ref>

-	~~===Crystal Structure~~ of the ~~SRP19-7S~~.S ~~SRP RNA Complex~~ of M. ~~jannaschii===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_12050674}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[1lng]] is a 2 chain structure with sequence from [http:~~/~~/en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LNG OCA].~~	+

	==See Also==		==See Also==
	*[[Signal recognition particle protein\|Signal recognition particle protein]]		*[[Signal recognition particle protein\|Signal recognition particle protein]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	<~~ref group="xtra">PMID:012050674<~~/~~ref~~><~~references group="xtra"~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Methanocaldococcus jannaschii]]		[[Category: Methanocaldococcus jannaschii]]
	[[Category: Hainzl, T.]]		[[Category: Hainzl, T.]]

OCA at 15:14, 20 October 2012

OCA — Sat, 20 Oct 2012 15:14:26 GMT

←Older revision		Revision as of 15:14, 20 October 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
-	[[1lng]] is a 2 chain structure ~~of [[Signal recognition particle protein]]~~ with sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LNG OCA].	+	[[1lng]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LNG OCA].

	==See Also==		==See Also==