1m65 - Revision history

OCA at 07:40, 14 February 2024

OCA — Wed, 14 Feb 2024 07:40:17 GMT

←Older revision		Revision as of 07:40, 14 February 2024
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	<StructureSection load='1m65' size='340' side='right'caption='[[1m65]], [[Resolution\|resolution]] 1.57Å' scene=''>		<StructureSection load='1m65' size='340' side='right'caption='[[1m65]], [[Resolution\|resolution]] 1.57Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1m65]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~"bacillus_coli"_migula_1895 "bacillus~~ coli~~" migula 1895~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M65 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1M65 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1m65]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M65 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1M65 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene~~></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.57Å</td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1m68\|1m68]]</div~~></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1m65 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m65 OCA], [https://pdbe.org/1m65 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1m65 RCSB], [https://www.ebi.ac.uk/pdbsum/1m65 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1m65 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1m65 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m65 OCA], [https://pdbe.org/1m65 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1m65 RCSB], [https://www.ebi.ac.uk/pdbsum/1m65 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1m65 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/YCDX_ECOLI YCDX_ECOLI]] Hydrolyzes p-nitrophenyl phosphate (pNPP) in vitro. Involved in the swarming motility process.<ref>PMID:21965574</ref>	+	[https://www.uniprot.org/uniprot/YCDX_ECOLI YCDX_ECOLI] Hydrolyzes p-nitrophenyl phosphate (pNPP) in vitro. Involved in the swarming motility process.<ref>PMID:21965574</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bacillus~~ coli ~~migula 1895~~]]	+	[[Category: Escherichia coli]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Camerini-Otero~~, R D~~]]	+	[[Category: Camerini-Otero RD]]
-	[[Category: Gilliland~~, G L~~]]	+	[[Category: Gilliland GL]]
-	[[Category: Khil~~, P P~~]]	+	[[Category: Khil PP]]
-	[[Category: Obmolova, G]]	+	[[Category: Obmolova G]]
-	~~[[Category: S2F, Structure 2.Function Project~~]]	+	[[Category: Teplyakov A]]
-	[[Category: Teplyakov, A]]	+
-	~~[[Category: Beta-alpha-barrel]]~~	+
-	~~[[Category: Metallo-enzyme]]~~	+
-	~~[[Category: S2f]]~~	+
-	~~[[Category: Structural genomic]]~~	+
-	~~[[Category: Structure 2 function project]]~~	+
-	~~[[Category: Unknown function~~]]	+

OCA at 05:58, 28 April 2021

OCA — Wed, 28 Apr 2021 05:58:19 GMT

←Older revision		Revision as of 05:58, 28 April 2021
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	<StructureSection load='1m65' size='340' side='right'caption='[[1m65]], [[Resolution\|resolution]] 1.57Å' scene=''>		<StructureSection load='1m65' size='340' side='right'caption='[[1m65]], [[Resolution\|resolution]] 1.57Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1m65]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M65 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1M65 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1m65]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M65 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1M65 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1m68\|1m68]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1m68\|1m68]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1m65 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m65 OCA], [~~http~~://pdbe.org/1m65 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1m65 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1m65 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1m65 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1m65 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m65 OCA], [https://pdbe.org/1m65 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1m65 RCSB], [https://www.ebi.ac.uk/pdbsum/1m65 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1m65 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/YCDX_ECOLI YCDX_ECOLI]] Hydrolyzes p-nitrophenyl phosphate (pNPP) in vitro. Involved in the swarming motility process.<ref>PMID:21965574</ref>	+	[[https://www.uniprot.org/uniprot/YCDX_ECOLI YCDX_ECOLI]] Hydrolyzes p-nitrophenyl phosphate (pNPP) in vitro. Involved in the swarming motility process.<ref>PMID:21965574</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 09:00, 24 July 2019

OCA — Wed, 24 Jul 2019 09:00:35 GMT

←Older revision		Revision as of 09:00, 24 July 2019
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	==YCDX PROTEIN==		==YCDX PROTEIN==
-	<StructureSection load='1m65' size='340' side='right' caption='[[1m65]], [[Resolution\|resolution]] 1.57Å' scene=''>	+	<StructureSection load='1m65' size='340' side='right'caption='[[1m65]], [[Resolution\|resolution]] 1.57Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1m65]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M65 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1M65 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1m65]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M65 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1M65 FirstGlance]. <br>
Line 14:		Line 14:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m6/1m65_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m6/1m65_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 25:		Line 25:
	</StructureSection>		</StructureSection>
	[[Category: Bacillus coli migula 1895]]		[[Category: Bacillus coli migula 1895]]
		+	[[Category: Large Structures]]
	[[Category: Camerini-Otero, R D]]		[[Category: Camerini-Otero, R D]]
	[[Category: Gilliland, G L]]		[[Category: Gilliland, G L]]

OCA at 10:37, 18 October 2017

OCA — Wed, 18 Oct 2017 10:37:39 GMT

←Older revision		Revision as of 10:37, 18 October 2017
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		+
	==YCDX PROTEIN==		==YCDX PROTEIN==
	<StructureSection load='1m65' size='340' side='right' caption='[[1m65]], [[Resolution\|resolution]] 1.57Å' scene=''>		<StructureSection load='1m65' size='340' side='right' caption='[[1m65]], [[Resolution\|resolution]] 1.57Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1m68\|1m68]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1m68\|1m68]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1m65 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m65 OCA], [http://pdbe.org/1m65 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1m65 RCSB], [http://www.ebi.ac.uk/pdbsum/1m65 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1m65 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m65 OCA], [http://pdbe.org/1m65 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1m65 RCSB], [http://www.ebi.ac.uk/pdbsum/1m65 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1m65 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1m65 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	== References ==		== References ==

OCA at 14:21, 11 September 2015

OCA — Fri, 11 Sep 2015 14:21:16 GMT

←Older revision		Revision as of 14:21, 11 September 2015
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	<StructureSection load='1m65' size='340' side='right' caption='[[1m65]], [[Resolution\|resolution]] 1.57Å' scene=''>		<StructureSection load='1m65' size='340' side='right' caption='[[1m65]], [[Resolution\|resolution]] 1.57Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1m65]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Escherichia_coli Escherichia~~ coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M65 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1M65 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1m65]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M65 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1M65 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1m68\|1m68]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1m68\|1m68]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1m65 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m65 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1m65 RCSB], [http://www.ebi.ac.uk/pdbsum/1m65 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1m65 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m65 OCA], [http://pdbe.org/1m65 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1m65 RCSB], [http://www.ebi.ac.uk/pdbsum/1m65 PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 23:		Line 23:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Escherichia~~ coli]]	+	[[Category: Bacillus coli migula 1895]]
	[[Category: Camerini-Otero, R D]]		[[Category: Camerini-Otero, R D]]
	[[Category: Gilliland, G L]]		[[Category: Gilliland, G L]]

OCA at 17:38, 25 December 2014

OCA — Thu, 25 Dec 2014 17:38:17 GMT

←Older revision		Revision as of 17:38, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1m65]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M65 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1M65 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1m65]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M65 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1M65 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1m68\|1m68]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1m68\|1m68]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1m65 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m65 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1m65 RCSB], [http://www.ebi.ac.uk/pdbsum/1m65 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1m65 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m65 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1m65 RCSB], [http://www.ebi.ac.uk/pdbsum/1m65 PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/YCDX_ECOLI YCDX_ECOLI]] Hydrolyzes p-nitrophenyl phosphate (pNPP) in vitro. Involved in the swarming motility process.<ref>PMID:21965574</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 17:		Line 19:
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
-	[[Category: Camerini-Otero, R D.]]	+	[[Category: Camerini-Otero, R D]]
-	[[Category: Gilliland, G L.]]	+	[[Category: Gilliland, G L]]
-	[[Category: Khil, P P.]]	+	[[Category: Khil, P P]]
-	[[Category: Obmolova, G.]]	+	[[Category: Obmolova, G]]
-	[[Category: S2F, Structure 2.Function Project.]]	+	[[Category: S2F, Structure 2.Function Project]]
-	[[Category: Teplyakov, A.]]	+	[[Category: Teplyakov, A]]
	[[Category: Beta-alpha-barrel]]		[[Category: Beta-alpha-barrel]]
	[[Category: Metallo-enzyme]]		[[Category: Metallo-enzyme]]

OCA at 15:55, 28 September 2014

OCA — Sun, 28 Sep 2014 15:55:56 GMT

←Older revision		Revision as of 15:55, 28 September 2014
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-	~~[[Image:1m65.png\|left\|200px]]~~	+	==YCDX PROTEIN==
-		+	<StructureSection load='1m65' size='340' side='right' caption='[[1m65]], [[Resolution\|resolution]] 1.57Å' scene=''>
-	~~{{STRUCTURE_1m65\| PDB~~=~~1m65 \| SCENE~~= }}	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[1m65]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M65 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1M65 FirstGlance]. <br>
-	===~~YCDX PROTEIN~~===	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br>
-		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1m68\|1m68]]</td></tr>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1m65 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m65 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1m65 RCSB], [http://www.ebi.ac.uk/pdbsum/1m65 PDBsum]</span></td></tr>
-	==~~About this Structure~~==	+	<table>
-	[[1m65]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M65 OCA].	+	== Evolutionary Conservation ==
-		+	[[Image:Consurf_key_small.gif\|200px\|right]]
-	==~~Reference~~==	+	Check<jmol>
-	<~~ref group~~="~~xtra~~">~~PMID~~:~~012661000~~</~~ref~~><~~references group~~="~~xtra~~"/>	+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m6/1m65_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Camerini-Otero, R D.]]		[[Category: Camerini-Otero, R D.]]

OCA: Protected "1m65" [edit=sysop:move=sysop]

OCA — Wed, 05 Dec 2012 20:38:50 GMT

Protected "1m65" [edit=sysop:move=sysop]

←Older revision

Revision as of 20:38, 5 December 2012

OCA at 20:38, 5 December 2012

OCA — Wed, 05 Dec 2012 20:38:46 GMT

←Older revision		Revision as of 20:38, 5 December 2012
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-	{{Seed}}
	[[Image:1m65.png\|left\|200px]]		[[Image:1m65.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1m65", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
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	{{STRUCTURE_1m65\| PDB=1m65 \| SCENE= }}		{{STRUCTURE_1m65\| PDB=1m65 \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	~~1M65~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M65 OCA].	+	[[1m65]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M65 OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~12661000~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:012661000</ref><references group="xtra"/>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Camerini-Otero, R D.]]		[[Category: Camerini-Otero, R D.]]
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	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Structure 2 function project]]		[[Category: Structure 2 function project]]
-	[[Category: ~~Zinc~~]]	+	[[Category: Unknown function]]
-		+
-	~~''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 00:26:34 2009''~~	+

OCA at 22:26, 17 February 2009

OCA — Tue, 17 Feb 2009 22:26:36 GMT

←Older revision		Revision as of 22:26, 17 February 2009
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	==About this Structure==		==About this Structure==
-	1M65 is a ~~[[Single protein]]~~ structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M65 OCA].	+	1M65 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M65 OCA].

	==Reference==		==Reference==
-	Crystal structure of the Escherichia coli YcdX protein reveals a trinuclear zinc active site., Teplyakov A, Obmolova G, Khil PP, Howard AJ, Camerini-Otero RD, Gilliland GL, Proteins. 2003 May 1;51(2):315-8. PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/12661000 12661000]~~	+	<ref group="xtra">PMID:12661000</ref><references group="xtra"/>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
-	[[Category: Single protein]]
	[[Category: Camerini-Otero, R D.]]		[[Category: Camerini-Otero, R D.]]
	[[Category: Gilliland, G L.]]		[[Category: Gilliland, G L.]]
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	[[Category: Zinc]]		[[Category: Zinc]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Jul 2 23~~:17:~~49 2008~~''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 00:26:34 2009''