1njn - Revision history

OCA at 09:20, 16 August 2023

OCA — Wed, 16 Aug 2023 09:20:53 GMT

←Older revision		Revision as of 09:20, 16 August 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1njn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NJN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NJN FirstGlance]. <br>		<table><tr><td colspan='2'>[[1njn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NJN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NJN FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SPS:SPARSOMYCIN'>SPS</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 3.7Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SPS:SPARSOMYCIN'>SPS</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1njn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1njn OCA], [https://pdbe.org/1njn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1njn RCSB], [https://www.ebi.ac.uk/pdbsum/1njn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1njn ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1njn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1njn OCA], [https://pdbe.org/1njn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1njn RCSB], [https://www.ebi.ac.uk/pdbsum/1njn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1njn ProSAT]</span></td></tr>
	</table>		</table>

OCA at 07:14, 14 September 2022

OCA — Wed, 14 Sep 2022 07:14:56 GMT

←Older revision		Revision as of 07:14, 14 September 2022
Line 3:		Line 3:
	<StructureSection load='1njn' size='340' side='right'caption='[[1njn]], [[Resolution\|resolution]] 3.70Å' scene=''>		<StructureSection load='1njn' size='340' side='right'caption='[[1njn]], [[Resolution\|resolution]] 3.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1njn]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NJN OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=1NJN FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1njn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NJN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NJN FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SPS:SPARSOMYCIN'>SPS</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SPS:SPARSOMYCIN'>SPS</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1njm\|1njm]], [[1njo\|1njo]], [[1njp\|1njp]], [[1k01\|1k01]], [[1jzx\|1jzx]], [[1jzy\|1jzy]], [[1jzz\|1jzz]], [[1k00\|1k00]], [[1nkw\|1nkw]]</div></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1njn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1njn OCA], [https://pdbe.org/1njn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1njn RCSB], [https://www.ebi.ac.uk/pdbsum/1njn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1njn ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=1njn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1njn OCA], [~~http~~://pdbe.org/1njn PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1njn RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1njn PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1njn ProSAT]</span></td></tr>	+
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 23:		Line 22:
	[[Category: Deinococcus radiodurans]]		[[Category: Deinococcus radiodurans]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Agmon, I]]	+	[[Category: Agmon I]]
-	[[Category: Bartels, H]]	+	[[Category: Bartels H]]
-	[[Category: Bashan, A]]	+	[[Category: Bashan A]]
-	[[Category: Berisio, R]]	+	[[Category: Berisio R]]
-	[[Category: Hansen~~, H A~~]]	+	[[Category: Hansen HA]]
-	[[Category: Harms~~, J M~~]]	+	[[Category: Harms JM]]
-	[[Category: Schluenzen, F]]	+	[[Category: Schluenzen F]]
-	[[Category: Yonath, A]]	+	[[Category: Yonath A]]
-	[[Category: Zarivatch, R]]	+	[[Category: Zarivatch R]]
-	~~[[Category: Peptide bond formation]]~~	+
-	~~[[Category: Peptidyl-transferase]]~~	+
-	~~[[Category: Puromycin]]~~	+
-	~~[[Category: Ribosome]]~~	+
-	~~[[Category: Sparsomycin]]~~	+
-	~~[[Category: Trna~~]]	+

OCA at 07:11, 9 December 2020

OCA — Wed, 09 Dec 2020 07:11:11 GMT

←Older revision		Revision as of 07:11, 9 December 2020
Line 3:		Line 3:
	<StructureSection load='1njn' size='340' side='right'caption='[[1njn]], [[Resolution\|resolution]] 3.70Å' scene=''>		<StructureSection load='1njn' size='340' side='right'caption='[[1njn]], [[Resolution\|resolution]] 3.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1njn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NJN OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1NJN FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1njn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NJN OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1NJN FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SPS:SPARSOMYCIN'>SPS</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SPS:SPARSOMYCIN'>SPS</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1njm\|1njm]], [[1njo\|1njo]], [[1njp\|1njp]], [[1k01\|1k01]], [[1jzx\|1jzx]], [[1jzy\|1jzy]], [[1jzz\|1jzz]], [[1k00\|1k00]], [[1nkw\|1nkw]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1njm\|1njm]], [[1njo\|1njo]], [[1njp\|1njp]], [[1k01\|1k01]], [[1jzx\|1jzx]], [[1jzy\|1jzy]], [[1jzz\|1jzz]], [[1k00\|1k00]], [[1nkw\|1nkw]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1njn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1njn OCA], [http://pdbe.org/1njn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1njn RCSB], [http://www.ebi.ac.uk/pdbsum/1njn PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1njn ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1njn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1njn OCA], [http://pdbe.org/1njn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1njn RCSB], [http://www.ebi.ac.uk/pdbsum/1njn PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1njn ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 16:31, 6 March 2019

OCA — Wed, 06 Mar 2019 16:31:54 GMT

←Older revision		Revision as of 16:31, 6 March 2019
Line 1:		Line 1:

	==The crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with the antibiotic sparsomycin==		==The crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with the antibiotic sparsomycin==
-	<SX load='1njn' size='340' side='right~~' viewer='molstar~~' caption='[[1njn]], [[Resolution\|resolution]] 3.70Å' scene=''>	+	<StructureSection load='1njn' size='340' side='right'caption='[[1njn]], [[Resolution\|resolution]] 3.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1njn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NJN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1NJN FirstGlance]. <br>		<table><tr><td colspan='2'>[[1njn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NJN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1NJN FirstGlance]. <br>
Line 20:		Line 20:
	<references/>		<references/>
	__TOC__		__TOC__
-	</SX>	+	</StructureSection>
	[[Category: Deinococcus radiodurans]]		[[Category: Deinococcus radiodurans]]
	[[Category: Large Structures]]		[[Category: Large Structures]]

OCA at 16:27, 6 March 2019

OCA — Wed, 06 Mar 2019 16:27:27 GMT

←Older revision		Revision as of 16:27, 6 March 2019
Line 1:		Line 1:

	==The crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with the antibiotic sparsomycin==		==The crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with the antibiotic sparsomycin==
-	<~~StructureSection~~ load='1njn' size='340' side='right' caption='[[1njn]], [[Resolution\|resolution]] 3.70Å' scene=''>	+	<SX load='1njn' size='340' side='right' viewer='molstar' caption='[[1njn]], [[Resolution\|resolution]] 3.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1njn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NJN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1NJN FirstGlance]. <br>		<table><tr><td colspan='2'>[[1njn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NJN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1NJN FirstGlance]. <br>
Line 20:		Line 20:
	<references/>		<references/>
	__TOC__		__TOC__
-	</~~StructureSection~~>	+	</SX>
	[[Category: Deinococcus radiodurans]]		[[Category: Deinococcus radiodurans]]
		+	[[Category: Large Structures]]
	[[Category: Agmon, I]]		[[Category: Agmon, I]]
	[[Category: Bartels, H]]		[[Category: Bartels, H]]

OCA at 10:00, 1 November 2017

OCA — Wed, 01 Nov 2017 10:00:27 GMT

←Older revision		Revision as of 10:00, 1 November 2017
Line 1:		Line 1:
		+
	==The crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with the antibiotic sparsomycin==		==The crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with the antibiotic sparsomycin==
	<StructureSection load='1njn' size='340' side='right' caption='[[1njn]], [[Resolution\|resolution]] 3.70Å' scene=''>		<StructureSection load='1njn' size='340' side='right' caption='[[1njn]], [[Resolution\|resolution]] 3.70Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SPS:SPARSOMYCIN'>SPS</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SPS:SPARSOMYCIN'>SPS</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1njm\|1njm]], [[1njo\|1njo]], [[1njp\|1njp]], [[1k01\|1k01]], [[1jzx\|1jzx]], [[1jzy\|1jzy]], [[1jzz\|1jzz]], [[1k00\|1k00]], [[1nkw\|1nkw]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1njm\|1njm]], [[1njo\|1njo]], [[1njp\|1njp]], [[1k01\|1k01]], [[1jzx\|1jzx]], [[1jzy\|1jzy]], [[1jzz\|1jzz]], [[1k00\|1k00]], [[1nkw\|1nkw]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1njn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1njn OCA], [http://pdbe.org/1njn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1njn RCSB], [http://www.ebi.ac.uk/pdbsum/1njn PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1njn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1njn OCA], [http://pdbe.org/1njn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1njn RCSB], [http://www.ebi.ac.uk/pdbsum/1njn PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1njn ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 21:53, 9 September 2015

OCA — Wed, 09 Sep 2015 21:53:26 GMT

←Older revision		Revision as of 21:53, 9 September 2015
Line 5:		Line 5:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SPS:SPARSOMYCIN'>SPS</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SPS:SPARSOMYCIN'>SPS</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1njm\|1njm]], [[1njo\|1njo]], [[1njp\|1njp]], [[1k01\|1k01]], [[1jzx\|1jzx]], [[1jzy\|1jzy]], [[1jzz\|1jzz]], [[1k00\|1k00]], [[1nkw\|1nkw]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1njm\|1njm]], [[1njo\|1njo]], [[1njp\|1njp]], [[1k01\|1k01]], [[1jzx\|1jzx]], [[1jzy\|1jzy]], [[1jzz\|1jzz]], [[1k00\|1k00]], [[1nkw\|1nkw]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1njn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1njn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1njn RCSB], [http://www.ebi.ac.uk/pdbsum/1njn PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1njn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1njn OCA], [http://pdbe.org/1njn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1njn RCSB], [http://www.ebi.ac.uk/pdbsum/1njn PDBsum]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 15:		Line 15:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1njn" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 06:08, 22 December 2014

OCA — Mon, 22 Dec 2014 06:08:45 GMT

←Older revision		Revision as of 06:08, 22 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1njn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NJN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1NJN FirstGlance]. <br>		<table><tr><td colspan='2'>[[1njn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NJN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1NJN FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SPS:SPARSOMYCIN'>SPS</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SPS:SPARSOMYCIN'>SPS</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1njm\|1njm]], [[1njo\|1njo]], [[1njp\|1njp]], [[1k01\|1k01]], [[1jzx\|1jzx]], [[1jzy\|1jzy]], [[1jzz\|1jzz]], [[1k00\|1k00]], [[1nkw\|1nkw]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1njm\|1njm]], [[1njo\|1njo]], [[1njp\|1njp]], [[1k01\|1k01]], [[1jzx\|1jzx]], [[1jzy\|1jzy]], [[1jzz\|1jzz]], [[1k00\|1k00]], [[1nkw\|1nkw]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1njn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1njn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1njn RCSB], [http://www.ebi.ac.uk/pdbsum/1njn PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1njn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1njn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1njn RCSB], [http://www.ebi.ac.uk/pdbsum/1njn PDBsum]</span></td></tr>
-	<table>	+	</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 20:		Line 20:
	</StructureSection>		</StructureSection>
	[[Category: Deinococcus radiodurans]]		[[Category: Deinococcus radiodurans]]
-	[[Category: Agmon, I.]]	+	[[Category: Agmon, I]]
-	[[Category: Bartels, H.]]	+	[[Category: Bartels, H]]
-	[[Category: Bashan, A.]]	+	[[Category: Bashan, A]]
-	[[Category: Berisio, R.]]	+	[[Category: Berisio, R]]
-	[[Category: Hansen, H A.]]	+	[[Category: Hansen, H A]]
-	[[Category: Harms, J M.]]	+	[[Category: Harms, J M]]
-	[[Category: Schluenzen, F.]]	+	[[Category: Schluenzen, F]]
-	[[Category: Yonath, A.]]	+	[[Category: Yonath, A]]
-	[[Category: Zarivatch, R.]]	+	[[Category: Zarivatch, R]]
	[[Category: Peptide bond formation]]		[[Category: Peptide bond formation]]
	[[Category: Peptidyl-transferase]]		[[Category: Peptidyl-transferase]]
	[[Category: Puromycin]]		[[Category: Puromycin]]
-	[[Category: Ribosome]]
	[[Category: Ribosome]]		[[Category: Ribosome]]
	[[Category: Sparsomycin]]		[[Category: Sparsomycin]]
	[[Category: Trna]]		[[Category: Trna]]

OCA at 06:55, 9 June 2014

OCA — Mon, 09 Jun 2014 06:55:28 GMT

←Older revision		Revision as of 06:55, 9 June 2014
Line 1:		Line 1:
-	[[~~Image:~~1njn.~~png~~\|~~left~~\|~~200px~~]]	+	==The crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with the antibiotic sparsomycin==
		+	<StructureSection load='1njn' size='340' side='right' caption='[[1njn]], [[Resolution\|resolution]] 3.70Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1njn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NJN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1NJN FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SPS:SPARSOMYCIN'>SPS</scene><br>
		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1njm\|1njm]], [[1njo\|1njo]], [[1njp\|1njp]], [[1k01\|1k01]], [[1jzx\|1jzx]], [[1jzy\|1jzy]], [[1jzz\|1jzz]], [[1k00\|1k00]], [[1nkw\|1nkw]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1njn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1njn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1njn RCSB], [http://www.ebi.ac.uk/pdbsum/1njn PDBsum]</span></td></tr>
		+	<table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Crystal structures of tRNA mimics complexed with the large ribosomal subunit of Deinococcus radiodurans indicate that remote interactions determine the precise orientation of tRNA in the peptidyl-transferase center (PTC). The PTC tolerates various orientations of puromycin derivatives and its flexibility allows the conformational rearrangements required for peptide-bond formation. Sparsomycin binds to A2602 and alters the PTC conformation. H69, the intersubunit-bridge connecting the PTC and decoding site, may also participate in tRNA placement and translocation. A spiral rotation of the 3' end of the A-site tRNA around a 2-fold axis of symmetry identified within the PTC suggests a unified ribosomal machinery for peptide-bond formation, A-to-P-site translocation, and entrance of nascent proteins into the exit tunnel. Similar 2-fold related regions, detected in all known structures of large ribosomal subunits, indicate the universality of this mechanism.

-	~~{{STRUCTURE_1njn\| PDB=1njn \| SCENE= }}~~	+	Structural basis of the ribosomal machinery for peptide bond formation, translocation, and nascent chain progression.,Bashan A, Agmon I, Zarivach R, Schluenzen F, Harms J, Berisio R, Bartels H, Franceschi F, Auerbach T, Hansen HA, Kossoy E, Kessler M, Yonath A Mol Cell. 2003 Jan;11(1):91-102. PMID:12535524<ref>PMID:12535524</ref>

-	~~===The crystal structure~~ of the ~~50S Large ribosomal subunit from Deinococcus radiodurans complexed with the antibiotic sparsomycin===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_12535524}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[1njn]] is a 1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=1NJN OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:012535524<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Deinococcus radiodurans]]		[[Category: Deinococcus radiodurans]]
	[[Category: Agmon, I.]]		[[Category: Agmon, I.]]

OCA: Protected "1njn" [edit=sysop:move=sysop]

OCA — Tue, 14 Aug 2012 17:57:18 GMT

Protected "1njn" [edit=sysop:move=sysop]

←Older revision

Revision as of 17:57, 14 August 2012