1p87 - Revision history

OCA: Redirecting to 4v48

OCA — Wed, 10 Dec 2014 14:58:35 GMT

Redirecting to 4v48

←Older revision		Revision as of 14:58, 10 December 2014
Line 1:		Line 1:
-	~~==Real space refined coordinates of the 30S subunit fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosome==~~	+	#REDIRECT [[4v48]] This PDB entry is obsolete and replaced by 4v48
-	~~<StructureSection load='1p87' size='340' side='right' caption='~~[[~~1p87]], [[Resolution\|resolution]] 11.50Å' scene=''>~~	+
-	~~== Structural highlights ==~~	+
-	~~<table><tr><td colspan='2'>[[1p87~~]] is a 20 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P87 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1P87 FirstGlance]. <br>	+
-	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1gix\|1gix]], [[1giy\|1giy]], [[1jj2\|1jj2]], [[1ibl\|1ibl]], [[1lnr\|1lnr]], [[1m5g\|1m5g]], [[1p86\|1p86]]</td></tr>	+
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1p87 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1p87 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1p87 RCSB], [http://www.ebi.ac.uk/pdbsum/1p87 PDBsum]</span></td></tr>	+
-	~~<table>~~	+
-	~~== Evolutionary Conservation ==~~	+
-	~~[[Image:Consurf_key_small.gif\|200px\|right]]~~	+
-	~~Check<jmol>~~	+
-	~~<jmolCheckbox>~~	+
-	~~<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p8/1p87_consurf.spt"</scriptWhenChecked>~~	+
-	~~<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>~~	+
-	~~<text>to colour the structure by Evolutionary Conservation</text>~~	+
-	~~</jmolCheckbox>~~	+
-	~~</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method~~ and ~~the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].~~	+
-	~~<div style="clear:both"></div>~~	+
-	~~<div style="background-color:#fffaf0;">~~	+
-	~~== Publication Abstract from PubMed ==~~	+
-	~~Cryo-EM density maps showing the 70S ribosome of E. coli in two different functional states related~~ by a ratchet-like motion were analyzed using real-space refinement. Comparison of the two resulting atomic models shows that the ribosome changes from a compact structure to a looser one, coupled with the rearrangement of many of the proteins. Furthermore, in contrast to the unchanged inter-subunit bridges formed wholly by RNA, the bridges involving proteins undergo large conformational changes following the ratchet-like motion, suggesting an important role of ribosomal proteins in facilitating the dynamics of translation.	+
-		+
-	Study of the structural dynamics of the E coli 70S ribosome using real-space refinement.,Gao H, Sengupta J, Valle M, Korostelev A, Eswar N, Stagg SM, Van Roey P, Agrawal RK, Harvey SC, Sali A, Chapman MS, Frank J Cell. 2003 Jun 13;113(6):789-801. PMID:12809609<ref>PMID:12809609</ref>	+
-		+
-	~~From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>~~	+
-	~~</div>~~	+
-		+
-	~~==See Also==~~	+
-	*[[Ribosome 3D structures\|Ribosome 3D structures]]	+
-	~~== References ==~~	+
-	~~<references/>~~	+
-	~~__TOC__~~	+
-	~~</StructureSection>~~	+
-	~~[[Category: Escherichia coli]]~~	+
-	~~[[Category: Agrawal, R K.]]~~	+
-	~~[[Category: Chapman, M S.]]~~	+
-	~~[[Category: Eswar, N.]]~~	+
-	~~[[Category: Frank, J.]]~~	+
-	~~[[Category: Gao, H.]]~~	+
-	~~[[Category: Harvey, S T.]]~~	+
-	~~[[Category: Korostelev, A]]~~	+
-	~~[[Category: Roey, P Van.]]~~	+
-	~~[[Category: Sali, A.]]~~	+
-	~~[[Category: Sengupta, J.]]~~	+
-	~~[[Category: Stagg, S M.]]~~	+
-	~~[[Category: Valle, M.]]~~	+
-	~~[[Category: Efg-gtp-bound state]]~~	+
-	~~[[Category: Ratchet-like movement]]~~	+
-	~~[[Category: Real-space refinement]]~~	+
-	~~[[Category: Ribosome]]~~	+

OCA at 21:18, 28 September 2014

OCA — Sun, 28 Sep 2014 21:18:54 GMT

←Older revision		Revision as of 21:18, 28 September 2014
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-	[[~~Image:~~1p87.~~png~~\|~~left~~\|200px]]	+	==Real space refined coordinates of the 30S subunit fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosome==
		+	<StructureSection load='1p87' size='340' side='right' caption='[[1p87]], [[Resolution\|resolution]] 11.50Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1p87]] is a 20 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P87 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1P87 FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1gix\|1gix]], [[1giy\|1giy]], [[1jj2\|1jj2]], [[1ibl\|1ibl]], [[1lnr\|1lnr]], [[1m5g\|1m5g]], [[1p86\|1p86]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1p87 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1p87 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1p87 RCSB], [http://www.ebi.ac.uk/pdbsum/1p87 PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p8/1p87_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Cryo-EM density maps showing the 70S ribosome of E. coli in two different functional states related by a ratchet-like motion were analyzed using real-space refinement. Comparison of the two resulting atomic models shows that the ribosome changes from a compact structure to a looser one, coupled with the rearrangement of many of the proteins. Furthermore, in contrast to the unchanged inter-subunit bridges formed wholly by RNA, the bridges involving proteins undergo large conformational changes following the ratchet-like motion, suggesting an important role of ribosomal proteins in facilitating the dynamics of translation.

-	~~{{STRUCTURE_1p87\| PDB=1p87 \| SCENE= }}~~	+	Study of the structural dynamics of the E coli 70S ribosome using real-space refinement.,Gao H, Sengupta J, Valle M, Korostelev A, Eswar N, Stagg SM, Van Roey P, Agrawal RK, Harvey SC, Sali A, Chapman MS, Frank J Cell. 2003 Jun 13;113(6):789-801. PMID:12809609<ref>PMID:12809609</ref>

-	~~===Real space refined coordinates~~ of the ~~30S subunit fitted into the low resolution cryo-EM map~~ of ~~the initiation-like state of E~~. ~~coli 70S ribosome===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_12809609}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[1p87]] is a 20 chain structure with sequence from [http:~~/~~/en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P87 OCA].~~	+

	==See Also==		==See Also==
-	*[[~~Ribosomal protein S10~~\|~~Ribosomal protein S10~~]]	+	*[[Ribosome 3D structures\|Ribosome 3D structures]]
-	*[[Ribosomal protein S11\|Ribosomal protein S11]]	+	== References ==
-	*[[Ribosomal protein S12\|Ribosomal protein S12]]	+	<references/>
-	*[[Ribosomal protein S13\|Ribosomal protein S13]]	+	__TOC__
-	*[[Ribosomal protein S14\|Ribosomal protein S14]]	+	</StructureSection>
-	*[[Ribosomal protein S15\|Ribosomal protein S15]]	+
-	*[[Ribosomal protein S16\|Ribosomal protein S16]]	+
-	*[[Ribosomal protein S17\|Ribosomal protein S17]]	+
-	*[[Ribosomal protein S18\|Ribosomal protein S18]]	+
-	*[[Ribosomal protein S19\|Ribosomal protein S19]]	+
-	*[[Ribosomal protein S2\|Ribosomal protein S2]]	+
-	*[[Ribosomal protein S20\|Ribosomal protein S20]]	+
-	*[[Ribosomal protein S3\|Ribosomal protein S3]]	+
-	*[[Ribosomal protein S4\|Ribosomal protein S4]]	+
-	*[[Ribosomal protein S5\|Ribosomal protein S5]]	+
-	*[[Ribosomal protein S6\|Ribosomal protein S6]]	+
-	*[[Ribosomal protein S7\|Ribosomal protein S7]]	+
-	*[[Ribosomal protein S8\|Ribosomal protein S8]]	+
-	*[[Ribosomal protein S9\|Ribosomal protein S9]]	+
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:012809609<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Agrawal, R K.]]		[[Category: Agrawal, R K.]]

OCA at 10:21, 20 October 2012

OCA — Sat, 20 Oct 2012 10:21:09 GMT

←Older revision		Revision as of 10:21, 20 October 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
-	[[1p87]] is a 20 chain structure of [[Ribosomal protein S10]], [[Ribosomal protein S11]], [[Ribosomal protein S12]], [[Ribosomal protein S13]], [[Ribosomal protein S14]], [[Ribosomal protein S15]], [[Ribosomal protein S16]], [[Ribosomal protein S17]], [[Ribosomal protein S18]], [[Ribosomal protein S19]], [[Ribosomal protein S2]], [[Ribosomal protein S20]], [[Ribosomal protein S3]], [[Ribosomal protein S4]], [[Ribosomal protein S5]], [[Ribosomal protein S6]], [[Ribosomal protein S7]], [[Ribosomal protein S8]] and [[Ribosomal protein S9]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P87 OCA].	+	[[1p87]] is a 20 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P87 OCA].

	==See Also==		==See Also==

OCA at 01:49, 26 July 2012

OCA — Thu, 26 Jul 2012 01:49:13 GMT

←Older revision		Revision as of 01:49, 26 July 2012
Line 1:		Line 1:
	[[Image:1p87.png\|left\|200px]]		[[Image:1p87.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1p87", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_1p87\| PDB=1p87 \| SCENE= }}		{{STRUCTURE_1p87\| PDB=1p87 \| SCENE= }}

	===Real space refined coordinates of the 30S subunit fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosome===		===Real space refined coordinates of the 30S subunit fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosome===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_12809609}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 12809609 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_12809609}}		{{ABSTRACT_PUBMED_12809609}}

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	==See Also==		==See Also==
-	*[[Ribosomal protein S10]]	+	*[[Ribosomal protein S10\|Ribosomal protein S10]]
-	*[[Ribosomal protein S11]]	+	*[[Ribosomal protein S11\|Ribosomal protein S11]]
-	*[[Ribosomal protein S12]]	+	*[[Ribosomal protein S12\|Ribosomal protein S12]]
-	*[[Ribosomal protein S13]]	+	*[[Ribosomal protein S13\|Ribosomal protein S13]]
-	*[[Ribosomal protein S14]]	+	*[[Ribosomal protein S14\|Ribosomal protein S14]]
-	*[[Ribosomal protein S15]]	+	*[[Ribosomal protein S15\|Ribosomal protein S15]]
-	*[[Ribosomal protein S16]]	+	*[[Ribosomal protein S16\|Ribosomal protein S16]]
-	*[[Ribosomal protein S17]]	+	*[[Ribosomal protein S17\|Ribosomal protein S17]]
-	*[[Ribosomal protein S18]]	+	*[[Ribosomal protein S18\|Ribosomal protein S18]]
-	*[[Ribosomal protein S19]]	+	*[[Ribosomal protein S19\|Ribosomal protein S19]]
-	*[[Ribosomal protein S2]]	+	*[[Ribosomal protein S2\|Ribosomal protein S2]]
-	*[[Ribosomal protein S20]]	+	*[[Ribosomal protein S20\|Ribosomal protein S20]]
-	*[[Ribosomal protein S3]]	+	*[[Ribosomal protein S3\|Ribosomal protein S3]]
-	*[[Ribosomal protein S4]]	+	*[[Ribosomal protein S4\|Ribosomal protein S4]]
-	*[[Ribosomal protein S5]]	+	*[[Ribosomal protein S5\|Ribosomal protein S5]]
-	*[[Ribosomal protein S6]]	+	*[[Ribosomal protein S6\|Ribosomal protein S6]]
-	*[[Ribosomal protein S7]]	+	*[[Ribosomal protein S7\|Ribosomal protein S7]]
-	*[[Ribosomal protein S8]]	+	*[[Ribosomal protein S8\|Ribosomal protein S8]]
-	*[[Ribosomal protein S9]]	+	*[[Ribosomal protein S9\|Ribosomal protein S9]]

	==Reference==		==Reference==

OCA at 05:47, 15 February 2012

OCA — Wed, 15 Feb 2012 05:47:09 GMT

←Older revision		Revision as of 05:47, 15 February 2012
Line 19:		Line 19:

	==About this Structure==		==About this Structure==
-	[[1p87]] is a 20 chain structure of [[Ribosomal protein S10]], [[Ribosomal protein S11]], [[Ribosomal protein S12]], [[Ribosomal protein S13]], [[Ribosomal protein S15]], [[Ribosomal protein S17]], [[Ribosomal protein S2]], [[Ribosomal protein S20]], [[Ribosomal protein S3]] ~~and~~ [[Ribosomal protein S4]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P87 OCA].	+	[[1p87]] is a 20 chain structure of [[Ribosomal protein S10]], [[Ribosomal protein S11]], [[Ribosomal protein S12]], [[Ribosomal protein S13]], [[Ribosomal protein S14]], [[Ribosomal protein S15]], [[Ribosomal protein S16]], [[Ribosomal protein S17]], [[Ribosomal protein S18]], [[Ribosomal protein S19]], [[Ribosomal protein S2]], [[Ribosomal protein S20]], [[Ribosomal protein S3]], [[Ribosomal protein S4]], [[Ribosomal protein S5]], [[Ribosomal protein S6]], [[Ribosomal protein S7]], [[Ribosomal protein S8]] and [[Ribosomal protein S9]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P87 OCA].

	==See Also==		==See Also==
Line 26:		Line 26:
	*[[Ribosomal protein S12]]		*[[Ribosomal protein S12]]
	*[[Ribosomal protein S13]]		*[[Ribosomal protein S13]]
		+	*[[Ribosomal protein S14]]
	*[[Ribosomal protein S15]]		*[[Ribosomal protein S15]]
		+	*[[Ribosomal protein S16]]
	*[[Ribosomal protein S17]]		*[[Ribosomal protein S17]]
		+	*[[Ribosomal protein S18]]
		+	*[[Ribosomal protein S19]]
	*[[Ribosomal protein S2]]		*[[Ribosomal protein S2]]
	*[[Ribosomal protein S20]]		*[[Ribosomal protein S20]]
	*[[Ribosomal protein S3]]		*[[Ribosomal protein S3]]
	*[[Ribosomal protein S4]]		*[[Ribosomal protein S4]]
		+	*[[Ribosomal protein S5]]
		+	*[[Ribosomal protein S6]]
		+	*[[Ribosomal protein S7]]
		+	*[[Ribosomal protein S8]]
		+	*[[Ribosomal protein S9]]

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~12809609~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:012809609</ref><references group="xtra"/>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Agrawal, R K.]]		[[Category: Agrawal, R K.]]

OCA: Protected "1p87" [edit=sysop:move=sysop]

OCA — Sun, 26 Dec 2010 21:59:14 GMT

Protected "1p87" [edit=sysop:move=sysop]

←Older revision

Revision as of 21:59, 26 December 2010

OCA at 21:59, 26 December 2010

OCA — Sun, 26 Dec 2010 21:59:13 GMT

←Older revision		Revision as of 21:59, 26 December 2010
Line 1:		Line 1:
-	{{Seed}}
	[[Image:1p87.png\|left\|200px]]		[[Image:1p87.png\|left\|200px]]

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	==About this Structure==		==About this Structure==
-	~~1P87~~ is a 20 ~~chains~~ structure of ~~sequences~~ from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P87 OCA].	+	[[1p87]] is a 20 chain structure of [[Ribosomal protein S10]], [[Ribosomal protein S11]], [[Ribosomal protein S12]], [[Ribosomal protein S13]], [[Ribosomal protein S15]], [[Ribosomal protein S17]], [[Ribosomal protein S2]], [[Ribosomal protein S20]], [[Ribosomal protein S3]] and [[Ribosomal protein S4]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P87 OCA].
		+
		+	==See Also==
		+	*[[Ribosomal protein S10]]
		+	*[[Ribosomal protein S11]]
		+	*[[Ribosomal protein S12]]
		+	*[[Ribosomal protein S13]]
		+	*[[Ribosomal protein S15]]
		+	*[[Ribosomal protein S17]]
		+	*[[Ribosomal protein S2]]
		+	*[[Ribosomal protein S20]]
		+	*[[Ribosomal protein S3]]
		+	*[[Ribosomal protein S4]]

	==Reference==		==Reference==
Line 41:		Line 52:
	[[Category: Real-space refinement]]		[[Category: Real-space refinement]]
	[[Category: Ribosome]]		[[Category: Ribosome]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 28 09:58:37 2009''

OCA at 07:58, 28 October 2009

OCA — Wed, 28 Oct 2009 07:58:38 GMT

←Older revision		Revision as of 07:58, 28 October 2009
Line 40:		Line 40:
	[[Category: Ratchet-like movement]]		[[Category: Ratchet-like movement]]
	[[Category: Real-space refinement]]		[[Category: Real-space refinement]]
		+	[[Category: Ribosome]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Mon Feb 16 22~~:58:32 2009''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 28 09:58:37 2009''

OCA at 20:58, 16 February 2009

OCA — Mon, 16 Feb 2009 20:58:33 GMT

←Older revision		Revision as of 20:58, 16 February 2009
Line 20:		Line 20:

	==About this Structure==		==About this Structure==
-	1P87 is a ~~[[Protein complex]]~~ structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P87 OCA].	+	1P87 is a 20 chains structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P87 OCA].

	==Reference==		==Reference==
-	Study of the structural dynamics of the E coli 70S ribosome using real-space refinement., Gao H, Sengupta J, Valle M, Korostelev A, Eswar N, Stagg SM, Van Roey P, Agrawal RK, Harvey SC, Sali A, Chapman MS, Frank J, Cell. 2003 Jun 13;113(6):789-801. PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/12809609 12809609]~~	+	<ref group="xtra">PMID:12809609</ref><references group="xtra"/>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
-	[[Category: Protein complex]]
	[[Category: Agrawal, R K.]]		[[Category: Agrawal, R K.]]
	[[Category: Chapman, M S.]]		[[Category: Chapman, M S.]]
Line 42:		Line 41:
	[[Category: Real-space refinement]]		[[Category: Real-space refinement]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon ~~Jul 28 03~~:35:~~51 2008~~''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 22:58:32 2009''

OCA at 00:36, 28 July 2008

OCA — Mon, 28 Jul 2008 00:36:01 GMT

←Older revision		Revision as of 00:36, 28 July 2008
Line 1:		Line 1:
-	[[Image:1p87.~~gif~~\|left\|200px]]	+	{{Seed}}
		+	[[Image:1p87.png\|left\|200px]]

	<!--		<!--
Line 9:		Line 10:
	{{STRUCTURE_1p87\| PDB=1p87 \| SCENE= }}		{{STRUCTURE_1p87\| PDB=1p87 \| SCENE= }}

-	~~'''~~Real space refined coordinates of the 30S subunit fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosome~~'''~~	+	===Real space refined coordinates of the 30S subunit fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosome===


-	~~==Overview==~~	+	<!--
-	~~Cryo~~-~~EM density maps showing the 70S ribosome of E. coli in two different functional states related by a ratchet~~-~~like motion were analyzed using real-space refinement. Comparison of the two resulting atomic models shows that~~ the ~~ribosome changes from a compact structure~~ to ~~a looser one, coupled with~~ the ~~rearrangement of many of the proteins~~. ~~Furthermore~~, ~~in contrast to~~ the ~~unchanged inter~~-~~subunit bridges formed wholly by RNA, the bridges involving proteins undergo large conformational changes following the ratchet~~-~~like motion, suggesting an important role of ribosomal proteins in facilitating the dynamics of translation.~~	+	The line below this paragraph, {{ABSTRACT_PUBMED_12809609}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 12809609 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_12809609}}

	==About this Structure==		==About this Structure==
Line 37:		Line 41:
	[[Category: Ratchet-like movement]]		[[Category: Ratchet-like movement]]
	[[Category: Real-space refinement]]		[[Category: Real-space refinement]]
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Sat May 3 04~~:48:21 2008''	+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 03:35:51 2008''