1png - Revision history

OCA at 11:48, 14 June 2023

OCA — Wed, 14 Jun 2023 11:48:39 GMT

←Older revision		Revision as of 11:48, 14 June 2023
Line 3:		Line 3:
	<StructureSection load='1png' size='340' side='right'caption='[[1png]], [[Resolution\|resolution]] 2.20Å' scene=''>		<StructureSection load='1png' size='340' side='right'caption='[[1png]], [[Resolution\|resolution]] 2.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1png]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Atcc_13253 Atcc 13253~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PNG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PNG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1png]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Elizabethkingia_meningoseptica Elizabethkingia meningoseptica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PNG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PNG FirstGlance]. <br>
-	</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine_amidase Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.52 3.5.1.52] </span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1png FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1png OCA], [https://pdbe.org/1png PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1png RCSB], [https://www.ebi.ac.uk/pdbsum/1png PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1png ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1png FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1png OCA], [https://pdbe.org/1png PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1png RCSB], [https://www.ebi.ac.uk/pdbsum/1png PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1png ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/PNGF_ELIMR PNGF_ELIMR]] Cleaves an entire glycan from a glycoprotein. Requires that the glycosylated asparagine moiety (reaction 1) be substituted on its amino (R1) and carboxyl (R2) terminus with a polypeptide chain.	+	[https://www.uniprot.org/uniprot/PNGF_ELIMR PNGF_ELIMR] Cleaves an entire glycan from a glycoprotein. Requires that the glycosylated asparagine moiety (reaction 1) be substituted on its amino (R1) and carboxyl (R2) terminus with a polypeptide chain.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 25:		Line 24:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Atcc 13253~~]]	+	[[Category: Elizabethkingia meningoseptica]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Kuhn, P]]	+	[[Category: Kuhn P]]
-	[[Category: Roey, P ~~Van]]~~	+	[[Category: Van Roey P]]
-	~~[[Category: Hydrolase~~]]	+

OCA at 09:32, 8 September 2021

OCA — Wed, 08 Sep 2021 09:32:19 GMT

←Older revision		Revision as of 09:32, 8 September 2021
Line 3:		Line 3:
	<StructureSection load='1png' size='340' side='right'caption='[[1png]], [[Resolution\|resolution]] 2.20Å' scene=''>		<StructureSection load='1png' size='340' side='right'caption='[[1png]], [[Resolution\|resolution]] 2.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1png]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Atcc_13253 Atcc 13253]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PNG OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1PNG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1png]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_13253 Atcc 13253]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PNG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PNG FirstGlance]. <br>
-	</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine_amidase Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.52 3.5.1.52] </span></td></tr>	+	</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine_amidase Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.52 3.5.1.52] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1png FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1png OCA], [~~http~~://pdbe.org/1png PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1png RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1png PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1png ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1png FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1png OCA], [https://pdbe.org/1png PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1png RCSB], [https://www.ebi.ac.uk/pdbsum/1png PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1png ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/PNGF_ELIMR PNGF_ELIMR]] Cleaves an entire glycan from a glycoprotein. Requires that the glycosylated asparagine moiety (reaction 1) be substituted on its amino (R1) and carboxyl (R2) terminus with a polypeptide chain.	+	[[https://www.uniprot.org/uniprot/PNGF_ELIMR PNGF_ELIMR]] Cleaves an entire glycan from a glycoprotein. Requires that the glycosylated asparagine moiety (reaction 1) be substituted on its amino (R1) and carboxyl (R2) terminus with a polypeptide chain.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==

OCA at 10:18, 27 November 2019

OCA — Wed, 27 Nov 2019 10:18:59 GMT

←Older revision		Revision as of 10:18, 27 November 2019
Line 1:		Line 1:

	==CRYSTAL STRUCTURE OF PEPTIDE-N(4)-(N-ACETYL-BETA-D-GLUCOSAMINYL) ASPARAGINE AMIDASE AT 2.2 ANGSTROMS RESOLUTION==		==CRYSTAL STRUCTURE OF PEPTIDE-N(4)-(N-ACETYL-BETA-D-GLUCOSAMINYL) ASPARAGINE AMIDASE AT 2.2 ANGSTROMS RESOLUTION==
-	<StructureSection load='1png' size='340' side='right' caption='[[1png]], [[Resolution\|resolution]] 2.20Å' scene=''>	+	<StructureSection load='1png' size='340' side='right'caption='[[1png]], [[Resolution\|resolution]] 2.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1png]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_13253 Atcc 13253]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PNG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1PNG FirstGlance]. <br>		<table><tr><td colspan='2'>[[1png]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_13253 Atcc 13253]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PNG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1PNG FirstGlance]. <br>
Line 18:		Line 18:
	</div>		</div>
	<div class="pdbe-citations 1png" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 1png" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Peptide N-glycanase\|Peptide N-glycanase]]
	== References ==		== References ==
	<references/>		<references/>
Line 23:		Line 26:
	</StructureSection>		</StructureSection>
	[[Category: Atcc 13253]]		[[Category: Atcc 13253]]
		+	[[Category: Large Structures]]
	[[Category: Kuhn, P]]		[[Category: Kuhn, P]]
	[[Category: Roey, P Van]]		[[Category: Roey, P Van]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]

OCA at 06:52, 29 November 2017

OCA — Wed, 29 Nov 2017 06:52:16 GMT

←Older revision		Revision as of 06:52, 29 November 2017
Line 1:		Line 1:
		+
	==CRYSTAL STRUCTURE OF PEPTIDE-N(4)-(N-ACETYL-BETA-D-GLUCOSAMINYL) ASPARAGINE AMIDASE AT 2.2 ANGSTROMS RESOLUTION==		==CRYSTAL STRUCTURE OF PEPTIDE-N(4)-(N-ACETYL-BETA-D-GLUCOSAMINYL) ASPARAGINE AMIDASE AT 2.2 ANGSTROMS RESOLUTION==
	<StructureSection load='1png' size='340' side='right' caption='[[1png]], [[Resolution\|resolution]] 2.20Å' scene=''>		<StructureSection load='1png' size='340' side='right' caption='[[1png]], [[Resolution\|resolution]] 2.20Å' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[1png]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_13253 Atcc 13253]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PNG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1PNG FirstGlance]. <br>		<table><tr><td colspan='2'>[[1png]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_13253 Atcc 13253]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PNG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1PNG FirstGlance]. <br>
	</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine_amidase Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.52 3.5.1.52] </span></td></tr>		</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine_amidase Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.52 3.5.1.52] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1png FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1png OCA], [http://pdbe.org/1png PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1png RCSB], [http://www.ebi.ac.uk/pdbsum/1png PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1png FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1png OCA], [http://pdbe.org/1png PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1png RCSB], [http://www.ebi.ac.uk/pdbsum/1png PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1png ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 17:		Line 18:
	</div>		</div>
	<div class="pdbe-citations 1png" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 1png" style="background-color:#fffaf0;"></div>
-
-	==See Also==
-	*[[Peptide N-glycanase\|Peptide N-glycanase]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 09:34, 10 September 2015

OCA — Thu, 10 Sep 2015 09:34:19 GMT

←Older revision		Revision as of 09:34, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='1png' size='340' side='right' caption='[[1png]], [[Resolution\|resolution]] 2.20Å' scene=''>		<StructureSection load='1png' size='340' side='right' caption='[[1png]], [[Resolution\|resolution]] 2.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1png]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Elizabethkingia_meningoseptica Elizabethkingia meningoseptica~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PNG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1PNG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1png]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_13253 Atcc 13253]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PNG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1PNG FirstGlance]. <br>
	</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine_amidase Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.52 3.5.1.52] </span></td></tr>		</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine_amidase Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.52 3.5.1.52] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1png FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1png OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1png RCSB], [http://www.ebi.ac.uk/pdbsum/1png PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1png FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1png OCA], [http://pdbe.org/1png PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1png RCSB], [http://www.ebi.ac.uk/pdbsum/1png PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 16:		Line 16:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1png" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Peptide N-glycanase\|Peptide N-glycanase]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Elizabethkingia meningoseptica~~]]	+	[[Category: Atcc 13253]]
	[[Category: Kuhn, P]]		[[Category: Kuhn, P]]
	[[Category: Roey, P Van]]		[[Category: Roey, P Van]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]

OCA at 21:52, 24 December 2014

OCA — Wed, 24 Dec 2014 21:52:37 GMT

←Older revision		Revision as of 21:52, 24 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1png]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Elizabethkingia_meningoseptica Elizabethkingia meningoseptica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PNG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1PNG FirstGlance]. <br>		<table><tr><td colspan='2'>[[1png]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Elizabethkingia_meningoseptica Elizabethkingia meningoseptica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PNG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1PNG FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine_amidase Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.52 3.5.1.52] </span></td></tr>	+	</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine_amidase Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.52 3.5.1.52] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1png FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1png OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1png RCSB], [http://www.ebi.ac.uk/pdbsum/1png PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1png FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1png OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1png RCSB], [http://www.ebi.ac.uk/pdbsum/1png PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/PNGF_ELIMR PNGF_ELIMR]] Cleaves an entire glycan from a glycoprotein. Requires that the glycosylated asparagine moiety (reaction 1) be substituted on its amino (R1) and carboxyl (R2) terminus with a polypeptide chain.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 19:		Line 21:
	</StructureSection>		</StructureSection>
	[[Category: Elizabethkingia meningoseptica]]		[[Category: Elizabethkingia meningoseptica]]
-	[[Category: Kuhn, P.]]	+	[[Category: Kuhn, P]]
-	[[Category: Roey, P Van.]]	+	[[Category: Roey, P Van]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]

OCA at 00:03, 29 September 2014

OCA — Mon, 29 Sep 2014 00:03:42 GMT

←Older revision		Revision as of 00:03, 29 September 2014
Line 1:		Line 1:
-	[[~~Image~~:1png.~~png\|left\|200px~~]]	+	==CRYSTAL STRUCTURE OF PEPTIDE-N(4)-(N-ACETYL-BETA-D-GLUCOSAMINYL) ASPARAGINE AMIDASE AT 2.2 ANGSTROMS RESOLUTION==
		+	<StructureSection load='1png' size='340' side='right' caption='[[1png]], [[Resolution\|resolution]] 2.20Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1png]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Elizabethkingia_meningoseptica Elizabethkingia meningoseptica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PNG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1PNG FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine_amidase Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.52 3.5.1.52] </span></td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1png FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1png OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1png RCSB], [http://www.ebi.ac.uk/pdbsum/1png PDBsum]</span></td></tr>
		+	<table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Peptide-N4-(N-acetyl-beta-D-glucosaminyl)asparagine amidase F (PNGase F) is an amidase that cleaves the beta-aspartylglucosylamine bond of asparagine-linked glycans. The 34.8-kDa (314 amino acids) enzyme has a very broad substrate specificity and is extensively used for studies of the structure and function of glycoproteins. Enzymatic activity of PNGase F requires recognition of both the peptide and the carbohydrate components of the substrate. Only limited information regarding the mechanism of action of the enzyme is available. The three-dimensional structure of PNGase F has been determined by X-ray crystallography at 2.2-A resolution. The protein folds into two domains comprising residues 1-137 and 143-314, respectively. Both domains have eight-stranded antiparallel beta-sandwich motifs that are very similar in geometry. Both sandwiches have parallel principal axes and lie side by side. The covalent link between the domains is located at the top end of the molecule. Extensive hydrogen-bonding contacts occur along the full length of the interface between the two domains. Three different areas, all at the interface between the two domains, have been identified as possible locations for the active site of the enzyme. These include a hydrophobic bowl of about 20 A in diameter on one surface of the molecule, a long polar cleft on the opposite side, and a cleft at the bottom, which is lined with large aromatic residues including eight tryptophans.

-	~~{{STRUCTURE_1png\| PDB=1png \| SCENE= }}~~	+	Crystal structure of peptide-N4-(N-acetyl-beta-D-glucosaminyl)asparagine amidase F at 2.2-A resolution.,Kuhn P, Tarentino AL, Plummer TH Jr, Van Roey P Biochemistry. 1994 Oct 4;33(39):11699-706. PMID:7918386<ref>PMID:7918386</ref>

-	~~===CRYSTAL STRUCTURE OF PEPTIDE-N(4)-(N-ACETYL-BETA-D-GLUCOSAMINYL) ASPARAGINE AMIDASE AT 2~~.~~2 ANGSTROMS RESOLUTION===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_7918386}}~~	+	== References ==
-		+	<references/>
-	==~~About this Structure~~==	+	__TOC__
-	~~[[1png]] is a 1 chain structure with sequence from [http:~~//~~en.wikipedia.org/wiki/Elizabethkingia_meningoseptica Elizabethkingia meningoseptica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PNG OCA].~~	+	</StructureSection>
	[[Category: Elizabethkingia meningoseptica]]		[[Category: Elizabethkingia meningoseptica]]
	[[Category: Kuhn, P.]]		[[Category: Kuhn, P.]]
	[[Category: Roey, P Van.]]		[[Category: Roey, P Van.]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]

OCA: Protected "1png" [edit=sysop:move=sysop]

OCA — Wed, 19 Dec 2012 11:53:49 GMT

Protected "1png" [edit=sysop:move=sysop]

←Older revision

Revision as of 11:53, 19 December 2012

OCA at 11:53, 19 December 2012

OCA — Wed, 19 Dec 2012 11:53:44 GMT

←Older revision		Revision as of 11:53, 19 December 2012
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-	{{Seed}}
	[[Image:1png.png\|left\|200px]]		[[Image:1png.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1png", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_1png\| PDB=1png \| SCENE= }}		{{STRUCTURE_1png\| PDB=1png \| SCENE= }}

	===CRYSTAL STRUCTURE OF PEPTIDE-N(4)-(N-ACETYL-BETA-D-GLUCOSAMINYL) ASPARAGINE AMIDASE AT 2.2 ANGSTROMS RESOLUTION===		===CRYSTAL STRUCTURE OF PEPTIDE-N(4)-(N-ACETYL-BETA-D-GLUCOSAMINYL) ASPARAGINE AMIDASE AT 2.2 ANGSTROMS RESOLUTION===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_7918386}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 7918386 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_7918386}}		{{ABSTRACT_PUBMED_7918386}}

	==About this Structure==		==About this Structure==
-	~~1PNG is a~~ [[~~Single protein~~]] structure of sequence from [http://en.wikipedia.org/wiki/Elizabethkingia_meningoseptica Elizabethkingia meningoseptica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PNG OCA].	+	[[1png]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Elizabethkingia_meningoseptica Elizabethkingia meningoseptica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PNG OCA].
-		+
-	~~==Reference==~~	+
-	Crystal structure of peptide-N4-(N-acetyl-beta-D-glucosaminyl)asparagine amidase F at 2.2-A resolution., Kuhn P, Tarentino AL, Plummer TH Jr, Van Roey P, Biochemistry. 1994 Oct 4;33(39):11699-706. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/7918386 7918386]	+
	[[Category: Elizabethkingia meningoseptica]]		[[Category: Elizabethkingia meningoseptica]]
-	[[Category: Single protein]]
	[[Category: Kuhn, P.]]		[[Category: Kuhn, P.]]
	[[Category: Roey, P Van.]]		[[Category: Roey, P Van.]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 00:38:57 2008''

OCA at 21:39, 27 July 2008

OCA — Sun, 27 Jul 2008 21:39:02 GMT

←Older revision		Revision as of 21:39, 27 July 2008
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-	[[Image:1png.~~jpg~~\|left\|200px]]	+	{{Seed}}
		+	[[Image:1png.png\|left\|200px]]

	<!--		<!--
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	{{STRUCTURE_1png\| PDB=1png \| SCENE= }}		{{STRUCTURE_1png\| PDB=1png \| SCENE= }}

-	~~'''~~CRYSTAL STRUCTURE OF PEPTIDE-N(4)-(N-ACETYL-BETA-D-GLUCOSAMINYL) ASPARAGINE AMIDASE AT 2.2 ANGSTROMS RESOLUTION~~'''~~	+	===CRYSTAL STRUCTURE OF PEPTIDE-N(4)-(N-ACETYL-BETA-D-GLUCOSAMINYL) ASPARAGINE AMIDASE AT 2.2 ANGSTROMS RESOLUTION===


-	~~==Overview==~~	+	<!--
-	~~Peptide~~-N4-~~(N-acetyl-beta-D-glucosaminyl)asparagine amidase F (PNGase F) is an amidase that cleaves the beta-aspartylglucosylamine bond of asparagine-linked glycans.~~ The ~~34.8-kDa (314 amino acids) enzyme has a very broad substrate specificity and is extensively used for studies of~~ the ~~structure and function of glycoproteins. Enzymatic activity of PNGase F requires recognition of both~~ the peptide and the carbohydrate components of the substrate. Only limited information regarding the mechanism of action of the enzyme is available. The three-dimensional structure of PNGase F has been determined by X-ray crystallography at 2.~~2-A resolution~~. ~~The protein folds into two domains comprising residues 1-137 and 143-314~~, respectively. Both domains have eight-stranded antiparallel beta-sandwich motifs that are very similar in geometry. Both sandwiches have parallel principal axes and lie side by side. The covalent link between the domains is ~~located at~~ the ~~top end of the molecule~~. ~~Extensive hydrogen~~-bonding contacts occur along the full length of the interface between the two domains. Three different areas, all at the interface between the two domains, have been identified as possible locations for the active site of the enzyme. These include a hydrophobic bowl of about 20 A in diameter on one surface of the molecule, a long polar cleft on the opposite side, and a cleft at the bottom, which is lined with large aromatic residues including eight tryptophans.	+	The line below this paragraph, {{ABSTRACT_PUBMED_7918386}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 7918386 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_7918386}}

	==About this Structure==		==About this Structure==
Line 25:		Line 29:
	[[Category: Roey, P Van.]]		[[Category: Roey, P Van.]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Sat May 3 05~~:16:49 2008''	+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 00:38:57 2008''