1rli - Revision history

OCA at 08:24, 14 February 2024

OCA — Wed, 14 Feb 2024 08:24:04 GMT

←Older revision		Revision as of 08:24, 14 February 2024
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	<StructureSection load='1rli' size='340' side='right'caption='[[1rli]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='1rli' size='340' side='right'caption='[[1rli]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1rli]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/~~"vibrio_subtilis"_ehrenberg_1835 "vibrio~~ subtilis~~" ehrenberg 1835~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RLI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1RLI FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1rli]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RLI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1RLI FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=PT:PLATINUM+(II)+ION'>PT</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.8Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=PT:PLATINUM+(II)+ION'>PT</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1rli FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rli OCA], [https://pdbe.org/1rli PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1rli RCSB], [https://www.ebi.ac.uk/pdbsum/1rli PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1rli ProSAT], [https://www.topsan.org/Proteins/MCSG/1rli TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1rli FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rli OCA], [https://pdbe.org/1rli PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1rli RCSB], [https://www.ebi.ac.uk/pdbsum/1rli PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1rli ProSAT], [https://www.topsan.org/Proteins/MCSG/1rli TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/YWQN_BACSU YWQN_BACSU]] Putative NADPH-dependent oxidoreductase (Potential).	+	[https://www.uniprot.org/uniprot/YWQN_BACSU YWQN_BACSU] Putative NADPH-dependent oxidoreductase (Potential).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Vibrio~~ subtilis ~~ehrenberg 1835~~]]	+	[[Category: Bacillus subtilis]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Joachimiak, A]]	+	[[Category: Joachimiak A]]
-	[[Category: Kim, Y]]	+	[[Category: Kim Y]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Quartey P]]
-	[[Category: Quartey, P]]	+
-	~~[[Category: Mcsg]]~~	+
-	~~[[Category: Protein binding]]~~	+
-	~~[[Category: PSI, Protein structure initiative]]~~	+
-	~~[[Category: Trp repressor~~]]	+

OCA at 10:14, 15 September 2021

OCA — Wed, 15 Sep 2021 10:14:52 GMT

←Older revision		Revision as of 10:14, 15 September 2021
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	<StructureSection load='1rli' size='340' side='right'caption='[[1rli]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='1rli' size='340' side='right'caption='[[1rli]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1rli]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RLI OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1RLI FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1rli]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RLI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1RLI FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=PT:PLATINUM+(II)+ION'>PT</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=PT:PLATINUM+(II)+ION'>PT</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1rli FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rli OCA], [~~http~~://pdbe.org/1rli PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1rli RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1rli PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1rli ProSAT], [~~http~~://www.topsan.org/Proteins/MCSG/1rli TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1rli FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rli OCA], [https://pdbe.org/1rli PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1rli RCSB], [https://www.ebi.ac.uk/pdbsum/1rli PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1rli ProSAT], [https://www.topsan.org/Proteins/MCSG/1rli TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/YWQN_BACSU YWQN_BACSU]] Putative NADPH-dependent oxidoreductase (Potential).	+	[[https://www.uniprot.org/uniprot/YWQN_BACSU YWQN_BACSU]] Putative NADPH-dependent oxidoreductase (Potential).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 19:30, 11 December 2019

OCA — Wed, 11 Dec 2019 19:30:21 GMT

←Older revision		Revision as of 19:30, 11 December 2019
Line 1:		Line 1:

	==The Structure of Trp Repressor Binding Protein from Bacillus subtilis==		==The Structure of Trp Repressor Binding Protein from Bacillus subtilis==
-	<StructureSection load='1rli' size='340' side='right' caption='[[1rli]], [[Resolution\|resolution]] 1.80Å' scene=''>	+	<StructureSection load='1rli' size='340' side='right'caption='[[1rli]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1rli]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RLI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1RLI FirstGlance]. <br>		<table><tr><td colspan='2'>[[1rli]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RLI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1RLI FirstGlance]. <br>
Line 22:		Line 22:
	</StructureSection>		</StructureSection>
	[[Category: Vibrio subtilis ehrenberg 1835]]		[[Category: Vibrio subtilis ehrenberg 1835]]
		+	[[Category: Large Structures]]
	[[Category: Joachimiak, A]]		[[Category: Joachimiak, A]]
	[[Category: Kim, Y]]		[[Category: Kim, Y]]

OCA at 07:01, 8 March 2018

OCA — Thu, 08 Mar 2018 07:01:38 GMT

←Older revision		Revision as of 07:01, 8 March 2018
Line 1:		Line 1:
		+
	==The Structure of Trp Repressor Binding Protein from Bacillus subtilis==		==The Structure of Trp Repressor Binding Protein from Bacillus subtilis==
	<StructureSection load='1rli' size='340' side='right' caption='[[1rli]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='1rli' size='340' side='right' caption='[[1rli]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1rli]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"~~bacillus_globigii~~"~~_migula_1900~~ "~~bacillus globigii~~" ~~migula 1900~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RLI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1RLI FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1rli]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RLI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1RLI FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=PT:PLATINUM+(II)+ION'>PT</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=PT:PLATINUM+(II)+ION'>PT</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rli FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rli OCA], [http://pdbe.org/1rli PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1rli RCSB], [http://www.ebi.ac.uk/pdbsum/1rli PDBsum], [http://www.topsan.org/Proteins/MCSG/1rli TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rli FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rli OCA], [http://pdbe.org/1rli PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1rli RCSB], [http://www.ebi.ac.uk/pdbsum/1rli PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1rli ProSAT], [http://www.topsan.org/Proteins/MCSG/1rli TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 12:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rl/1rli_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rl/1rli_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1rli ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bacillus globigii migula 1900~~]]	+	[[Category: Vibrio subtilis ehrenberg 1835]]
	[[Category: Joachimiak, A]]		[[Category: Joachimiak, A]]
	[[Category: Kim, Y]]		[[Category: Kim, Y]]

OCA at 09:21, 11 September 2015

OCA — Fri, 11 Sep 2015 09:21:51 GMT

←Older revision		Revision as of 09:21, 11 September 2015
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	<StructureSection load='1rli' size='340' side='right' caption='[[1rli]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='1rli' size='340' side='right' caption='[[1rli]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1rli]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Bacillus_subtilis Bacillus subtilis~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RLI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1RLI FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1rli]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_globigii"_migula_1900 "bacillus globigii" migula 1900]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RLI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1RLI FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=PT:PLATINUM+(II)+ION'>PT</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=PT:PLATINUM+(II)+ION'>PT</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rli FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rli OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1rli RCSB], [http://www.ebi.ac.uk/pdbsum/1rli PDBsum], [http://www.topsan.org/Proteins/MCSG/1rli TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rli FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rli OCA], [http://pdbe.org/1rli PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1rli RCSB], [http://www.ebi.ac.uk/pdbsum/1rli PDBsum], [http://www.topsan.org/Proteins/MCSG/1rli TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 20:		Line 20:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Bacillus ~~subtilis~~]]	+	[[Category: Bacillus globigii migula 1900]]
	[[Category: Joachimiak, A]]		[[Category: Joachimiak, A]]
	[[Category: Kim, Y]]		[[Category: Kim, Y]]

OCA at 14:26, 25 December 2014

OCA — Thu, 25 Dec 2014 14:26:09 GMT

←Older revision		Revision as of 14:26, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1rli]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RLI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1RLI FirstGlance]. <br>		<table><tr><td colspan='2'>[[1rli]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RLI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1RLI FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=PT:PLATINUM+(II)+ION'>PT</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=PT:PLATINUM+(II)+ION'>PT</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rli FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rli OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1rli RCSB], [http://www.ebi.ac.uk/pdbsum/1rli PDBsum], [http://www.topsan.org/Proteins/MCSG/1rli TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rli FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rli OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1rli RCSB], [http://www.ebi.ac.uk/pdbsum/1rli PDBsum], [http://www.topsan.org/Proteins/MCSG/1rli TOPSAN]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/YWQN_BACSU YWQN_BACSU]] Putative NADPH-dependent oxidoreductase (Potential).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 19:		Line 21:
	</StructureSection>		</StructureSection>
	[[Category: Bacillus subtilis]]		[[Category: Bacillus subtilis]]
-	[[Category: Joachimiak, A.]]	+	[[Category: Joachimiak, A]]
-	[[Category: Kim, Y.]]	+	[[Category: Kim, Y]]
-	[[Category: ~~MCSG, Midwest Center for~~ Structural ~~Genomics.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Quartey, P.]]	+	[[Category: Quartey, P]]
	[[Category: Mcsg]]		[[Category: Mcsg]]
-	[[Category: Midwest center for structural genomic]]
	[[Category: Protein binding]]		[[Category: Protein binding]]
-	[[Category: Protein structure initiative]]	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category: Psi]]~~	+
-	~~[[Category: Structural genomic~~]]	+
	[[Category: Trp repressor]]		[[Category: Trp repressor]]

OCA at 17:03, 29 September 2014

OCA — Mon, 29 Sep 2014 17:03:11 GMT

←Older revision		Revision as of 17:03, 29 September 2014
Line 1:		Line 1:
-	~~[[Image:1rli.png\|left\|200px]]~~	+	==The Structure of Trp Repressor Binding Protein from Bacillus subtilis==
-		+	<StructureSection load='1rli' size='340' side='right' caption='[[1rli]], [[Resolution\|resolution]] 1.80Å' scene=''>
-	~~{{STRUCTURE_1rli\| PDB=1rli \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[1rli]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RLI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1RLI FirstGlance]. <br>
-	===The Structure of Trp Repressor Binding Protein from Bacillus subtilis===	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=PT:PLATINUM+(II)+ION'>PT</scene><br>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rli FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rli OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1rli RCSB], [http://www.ebi.ac.uk/pdbsum/1rli PDBsum], [http://www.topsan.org/Proteins/MCSG/1rli TOPSAN]</span></td></tr>
-		+	<table>
-	==~~About this Structure~~==	+	== Evolutionary Conservation ==
-	[[1rli]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RLI OCA].	+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rl/1rli_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Bacillus subtilis]]		[[Category: Bacillus subtilis]]
	[[Category: Joachimiak, A.]]		[[Category: Joachimiak, A.]]

OCA: Protected "1rli" [edit=sysop:move=sysop]

OCA — Fri, 04 Jan 2013 10:33:17 GMT

Protected "1rli" [edit=sysop:move=sysop]

←Older revision

Revision as of 10:33, 4 January 2013

OCA at 10:33, 4 January 2013

OCA — Fri, 04 Jan 2013 10:33:14 GMT

←Older revision		Revision as of 10:33, 4 January 2013
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-	{{Seed}}
	[[Image:1rli.png\|left\|200px]]		[[Image:1rli.png\|left\|200px]]

-	<!--
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	{{STRUCTURE_1rli\| PDB=1rli \| SCENE= }}		{{STRUCTURE_1rli\| PDB=1rli \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	~~1RLI~~ is a 4 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RLI OCA].	+	[[1rli]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RLI OCA].
	[[Category: Bacillus subtilis]]		[[Category: Bacillus subtilis]]
	[[Category: Joachimiak, A.]]		[[Category: Joachimiak, A.]]
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	[[Category: Mcsg]]		[[Category: Mcsg]]
	[[Category: Midwest center for structural genomic]]		[[Category: Midwest center for structural genomic]]
		+	[[Category: Protein binding]]
	[[Category: Protein structure initiative]]		[[Category: Protein structure initiative]]
	[[Category: Psi]]		[[Category: Psi]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Trp repressor]]		[[Category: Trp repressor]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 17:34:29 2008''

OCA at 15:34, 16 November 2008

OCA — Sun, 16 Nov 2008 15:34:31 GMT

←Older revision		Revision as of 15:34, 16 November 2008
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	==About this Structure==		==About this Structure==
-	1RLI is a ~~[[Single protein]]~~ structure of ~~sequence~~ from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RLI OCA].	+	1RLI is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RLI OCA].
	[[Category: Bacillus subtilis]]		[[Category: Bacillus subtilis]]
-	[[Category: Single protein]]
	[[Category: Joachimiak, A.]]		[[Category: Joachimiak, A.]]
	[[Category: Kim, Y.]]		[[Category: Kim, Y.]]
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	[[Category: Trp repressor]]		[[Category: Trp repressor]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Mon Sep 29 05~~:13:46 2008''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 17:34:29 2008''