1t0d - Revision history

OCA at 21:36, 28 June 2023

OCA — Wed, 28 Jun 2023 21:36:59 GMT

←Older revision		Revision as of 21:36, 28 June 2023
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1t0d]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T0D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1T0D FirstGlance]. <br>		<table><tr><td colspan='2'>[[1t0d]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T0D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1T0D FirstGlance]. <br>
-	</td></tr><tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat">~~<scene name='pdbligand=MTU:9-BETA-D-RIBOFURANOSYL-9H-PURIN~~-2~~-AMINE'>MTU</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.2Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max~~-~~height: 3em;~~'>~~[[1t0e\|1t0e]]~~</~~div~~></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MTU:9-BETA-D-RIBOFURANOSYL-9H-PURIN-2-AMINE'>MTU</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1t0d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t0d OCA], [https://pdbe.org/1t0d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1t0d RCSB], [https://www.ebi.ac.uk/pdbsum/1t0d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1t0d ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1t0d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t0d OCA], [https://pdbe.org/1t0d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1t0d RCSB], [https://www.ebi.ac.uk/pdbsum/1t0d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1t0d ProSAT]</span></td></tr>
	</table>		</table>
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	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Ayida~~, B K~~]]	+	[[Category: Ayida BK]]
-	[[Category: Han, Q]]	+	[[Category: Han Q]]
-	[[Category: Hermann, T]]	+	[[Category: Hermann T]]
-	[[Category: Shandrick, S]]	+	[[Category: Shandrick S]]
-	[[Category: Simonsen~~, K B~~]]	+	[[Category: Simonsen KB]]
-	[[Category: Takahashi, M]]	+	[[Category: Takahashi M]]
-	[[Category: Vourloumis, D]]	+	[[Category: Vourloumis D]]
-	[[Category: Winters~~, G C~~]]	+	[[Category: Winters GC]]
-	[[Category: Zhao, Q]]	+	[[Category: Zhao Q]]
-	~~[[Category: 2-aminopurine]]~~	+
-	~~[[Category: 9-beta-d-ribofuranosyl-9h-purin-2-amine]]~~	+
-	~~[[Category: Bacterial decoding site rna]]~~	+
-	~~[[Category: Fluorescence emission spectra]]~~	+
-	~~[[Category: Rna~~]]	+

OCA at 07:40, 22 September 2021

OCA — Wed, 22 Sep 2021 07:40:05 GMT

←Older revision		Revision as of 07:40, 22 September 2021
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	<StructureSection load='1t0d' size='340' side='right'caption='[[1t0d]], [[Resolution\|resolution]] 2.20Å' scene=''>		<StructureSection load='1t0d' size='340' side='right'caption='[[1t0d]], [[Resolution\|resolution]] 2.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1t0d]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T0D OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1T0D FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1t0d]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T0D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1T0D FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MTU:9-BETA-D-RIBOFURANOSYL-9H-PURIN-2-AMINE'>MTU</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MTU:9-BETA-D-RIBOFURANOSYL-9H-PURIN-2-AMINE'>MTU</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1t0e\|1t0e]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1t0e\|1t0e]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1t0d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t0d OCA], [~~http~~://pdbe.org/1t0d PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1t0d RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1t0d PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1t0d ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1t0d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t0d OCA], [https://pdbe.org/1t0d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1t0d RCSB], [https://www.ebi.ac.uk/pdbsum/1t0d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1t0d ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__

OCA at 14:11, 18 December 2019

OCA — Wed, 18 Dec 2019 14:11:18 GMT

←Older revision		Revision as of 14:11, 18 December 2019
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	==Crystal Structure of 2-aminopurine labelled bacterial decoding site RNA==		==Crystal Structure of 2-aminopurine labelled bacterial decoding site RNA==
-	<StructureSection load='1t0d' size='340' side='right' caption='[[1t0d]], [[Resolution\|resolution]] 2.20Å' scene=''>	+	<StructureSection load='1t0d' size='340' side='right'caption='[[1t0d]], [[Resolution\|resolution]] 2.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1t0d]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T0D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1T0D FirstGlance]. <br>		<table><tr><td colspan='2'>[[1t0d]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T0D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1T0D FirstGlance]. <br>
Line 10:		Line 10:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Ayida, B K]]		[[Category: Ayida, B K]]
	[[Category: Han, Q]]		[[Category: Han, Q]]

OCA at 07:51, 14 March 2018

OCA — Wed, 14 Mar 2018 07:51:43 GMT

←Older revision		Revision as of 07:51, 14 March 2018
Line 1:		Line 1:
		+
	==Crystal Structure of 2-aminopurine labelled bacterial decoding site RNA==		==Crystal Structure of 2-aminopurine labelled bacterial decoding site RNA==
	<StructureSection load='1t0d' size='340' side='right' caption='[[1t0d]], [[Resolution\|resolution]] 2.20Å' scene=''>		<StructureSection load='1t0d' size='340' side='right' caption='[[1t0d]], [[Resolution\|resolution]] 2.20Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MTU:9-BETA-D-RIBOFURANOSYL-9H-PURIN-2-AMINE'>MTU</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MTU:9-BETA-D-RIBOFURANOSYL-9H-PURIN-2-AMINE'>MTU</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1t0e\|1t0e]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1t0e\|1t0e]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1t0d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t0d OCA], [http://pdbe.org/1t0d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1t0d RCSB], [http://www.ebi.ac.uk/pdbsum/1t0d PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1t0d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t0d OCA], [http://pdbe.org/1t0d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1t0d RCSB], [http://www.ebi.ac.uk/pdbsum/1t0d PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1t0d ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__

OCA at 12:48, 10 September 2015

OCA — Thu, 10 Sep 2015 12:48:51 GMT

←Older revision		Revision as of 12:48, 10 September 2015
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	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MTU:9-BETA-D-RIBOFURANOSYL-9H-PURIN-2-AMINE'>MTU</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MTU:9-BETA-D-RIBOFURANOSYL-9H-PURIN-2-AMINE'>MTU</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1t0e\|1t0e]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1t0e\|1t0e]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1t0d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t0d OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1t0d RCSB], [http://www.ebi.ac.uk/pdbsum/1t0d PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1t0d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t0d OCA], [http://pdbe.org/1t0d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1t0d RCSB], [http://www.ebi.ac.uk/pdbsum/1t0d PDBsum]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__

OCA at 18:15, 15 January 2015

OCA — Thu, 15 Jan 2015 18:15:08 GMT

←Older revision		Revision as of 18:15, 15 January 2015
Line 9:		Line 9:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Ayida, B K.]]	+	[[Category: Ayida, B K]]
-	[[Category: Han, Q.]]	+	[[Category: Han, Q]]
-	[[Category: Hermann, T.]]	+	[[Category: Hermann, T]]
-	[[Category: Shandrick, S.]]	+	[[Category: Shandrick, S]]
-	[[Category: Simonsen, K B.]]	+	[[Category: Simonsen, K B]]
-	[[Category: Takahashi, M.]]	+	[[Category: Takahashi, M]]
-	[[Category: Vourloumis, D.]]	+	[[Category: Vourloumis, D]]
-	[[Category: Winters, G C.]]	+	[[Category: Winters, G C]]
-	[[Category: Zhao, Q.]]	+	[[Category: Zhao, Q]]
	[[Category: 2-aminopurine]]		[[Category: 2-aminopurine]]
	[[Category: 9-beta-d-ribofuranosyl-9h-purin-2-amine]]		[[Category: 9-beta-d-ribofuranosyl-9h-purin-2-amine]]

OCA at 08:19, 8 October 2014

OCA — Wed, 08 Oct 2014 08:19:19 GMT

←Older revision		Revision as of 08:19, 8 October 2014
Line 1:		Line 1:
-	~~[[Image:1t0d.png\|left\|200px]]~~	+	==Crystal Structure of 2-aminopurine labelled bacterial decoding site RNA==
-		+	<StructureSection load='1t0d' size='340' side='right' caption='[[1t0d]], [[Resolution\|resolution]] 2.20Å' scene=''>
-	~~{{STRUCTURE_1t0d\| PDB=1t0d \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[1t0d]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T0D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1T0D FirstGlance]. <br>
-	===Crystal Structure of 2-aminopurine labelled bacterial decoding site RNA===	+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MTU:9-BETA-D-RIBOFURANOSYL-9H-PURIN-2-AMINE'>MTU</scene></td></tr>
-		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1t0e\|1t0e]]</td></tr>
-		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1t0d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t0d OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1t0d RCSB], [http://www.ebi.ac.uk/pdbsum/1t0d PDBsum]</span></td></tr>
-	==~~About this Structure~~==	+	</table>
-	[[1t0d]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T0D OCA].	+	__TOC__
-		+	</StructureSection>
-	==~~Reference~~==	+
-	<~~ref group~~="~~xtra~~">~~PMID~~:~~015199571~~</~~ref~~><~~references group~~="~~xtra~~"/>	+
	[[Category: Ayida, B K.]]		[[Category: Ayida, B K.]]
	[[Category: Han, Q.]]		[[Category: Han, Q.]]

OCA: Protected "1t0d" [edit=sysop:move=sysop]

OCA — Sat, 05 Jan 2013 13:36:31 GMT

Protected "1t0d" [edit=sysop:move=sysop]

←Older revision

Revision as of 13:36, 5 January 2013

OCA at 13:36, 5 January 2013

OCA — Sat, 05 Jan 2013 13:36:27 GMT

←Older revision		Revision as of 13:36, 5 January 2013
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-	{{Seed}}
	[[Image:1t0d.png\|left\|200px]]		[[Image:1t0d.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1t0d", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_1t0d\| PDB=1t0d \| SCENE= }}		{{STRUCTURE_1t0d\| PDB=1t0d \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	~~1T0D~~ is a 4 ~~chains~~ structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T0D OCA].	+	[[1t0d]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T0D OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~15199571~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:015199571</ref><references group="xtra"/>
	[[Category: Ayida, B K.]]		[[Category: Ayida, B K.]]
	[[Category: Han, Q.]]		[[Category: Han, Q.]]
Line 30:		Line 23:
	[[Category: 9-beta-d-ribofuranosyl-9h-purin-2-amine]]		[[Category: 9-beta-d-ribofuranosyl-9h-purin-2-amine]]
	[[Category: Bacterial decoding site rna]]		[[Category: Bacterial decoding site rna]]
-	[[Category: Crystal structure]]
	[[Category: Fluorescence emission spectra]]		[[Category: Fluorescence emission spectra]]
-		+	[[Category: Rna]]
-	~~''Page seeded by~~ [~~http~~:~~//oca.weizmann.ac.il/oca OCA~~ ] ~~on Mon Jan 18 11:28:28 2010''~~	+

OCA at 09:28, 18 January 2010

OCA — Mon, 18 Jan 2010 09:28:29 GMT

←Older revision		Revision as of 09:28, 18 January 2010
Line 14:		Line 14:

	==About this Structure==		==About this Structure==
-	Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T0D OCA].	+	1T0D is a 4 chains structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T0D OCA].

	==Reference==		==Reference==
-	Monitoring molecular recognition of the ribosomal decoding site., Shandrick S, Zhao Q, Han Q, Ayida BK, Takahashi M, Winters GC, Simonsen KB, Vourloumis D, Hermann T, Angew Chem Int Ed Engl. 2004 Jun 14;43(24):3177-82. PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/15199571 15199571]~~	+	<ref group="xtra">PMID:15199571</ref><references group="xtra"/>
	[[Category: Ayida, B K.]]		[[Category: Ayida, B K.]]
	[[Category: Han, Q.]]		[[Category: Han, Q.]]
Line 33:		Line 33:
	[[Category: Fluorescence emission spectra]]		[[Category: Fluorescence emission spectra]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon ~~Jul~~ 28 04:~~15:33 2008~~''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jan 18 11:28:28 2010''