1t2q - Revision history

OCA at 06:14, 3 April 2024

OCA — Wed, 03 Apr 2024 06:14:57 GMT

←Older revision		Revision as of 06:14, 3 April 2024
Line 3:		Line 3:
	<StructureSection load='1t2q' size='340' side='right'caption='[[1t2q]], [[Resolution\|resolution]] 1.83Å' scene=''>		<StructureSection load='1t2q' size='340' side='right'caption='[[1t2q]], [[Resolution\|resolution]] 1.83Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1t2q]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Lk3_transgenic_mice Lk3 transgenic mice~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T2Q OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=1T2Q FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1t2q]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T2Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1T2Q FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>~~, ~~<scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.83Å</td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat">~~N92 IgG2a ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode~~=~~Info&srchmode~~=~~5&id=10090 LK3 transgenic mice]), N92 L chain ([http~~:/~~/www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode~~=~~Info&srchmode~~=~~5&id=10090 LK3 transgenic mice]~~)</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=1t2q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t2q OCA], [~~http~~://pdbe.org/1t2q PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1t2q RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1t2q PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1t2q ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1t2q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t2q OCA], [https://pdbe.org/1t2q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1t2q RCSB], [https://www.ebi.ac.uk/pdbsum/1t2q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1t2q ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A2NHM3_MOUSE A2NHM3_MOUSE]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 26:		Line 28:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Lk3 transgenic mice~~]]	+	[[Category: Mus musculus]]
-	[[Category: Song~~, S C~~]]	+	[[Category: Song SC]]
-	[[Category: Spitalnik~~, S L~~]]	+	[[Category: Spitalnik SL]]
-	[[Category: Wedekind~~, J E~~]]	+	[[Category: Wedekind JE]]
-	[[Category: Xie, K]]	+	[[Category: Xie K]]
-	~~[[Category: Blood group antigen]]~~	+
-	~~[[Category: Fab]]~~	+
-	~~[[Category: Glycophorin some]]~~	+
-	~~[[Category: Immune system~~]]	+

OCA at 11:40, 24 December 2020

OCA — Thu, 24 Dec 2020 11:40:27 GMT

←Older revision		Revision as of 11:40, 24 December 2020
Line 1:		Line 1:

	==The Crystal Structure of an NNA7 Fab that recognizes an N-type blood group antigen==		==The Crystal Structure of an NNA7 Fab that recognizes an N-type blood group antigen==
-	<StructureSection load='1t2q' size='340' side='right' caption='[[1t2q]], [[Resolution\|resolution]] 1.83Å' scene=''>	+	<StructureSection load='1t2q' size='340' side='right'caption='[[1t2q]], [[Resolution\|resolution]] 1.83Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1t2q]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T2Q OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1T2Q FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1t2q]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T2Q OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1T2Q FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">N92 IgG2a ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice]), N92 L chain ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">N92 IgG2a ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice]), N92 L chain ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1t2q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t2q OCA], [http://pdbe.org/1t2q PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1t2q RCSB], [http://www.ebi.ac.uk/pdbsum/1t2q PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1t2q ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1t2q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t2q OCA], [http://pdbe.org/1t2q PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1t2q RCSB], [http://www.ebi.ac.uk/pdbsum/1t2q PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1t2q ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 21:		Line 21:
	==See Also==		==See Also==
	*[[Antibody 3D structures\|Antibody 3D structures]]		*[[Antibody 3D structures\|Antibody 3D structures]]
		+	*[[Sandbox 20009\|Sandbox 20009]]
		+	*[[3D structures of non-human antibody\|3D structures of non-human antibody]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Lk3 transgenic mice]]		[[Category: Lk3 transgenic mice]]
	[[Category: Song, S C]]		[[Category: Song, S C]]

OCA at 07:38, 14 March 2018

OCA — Wed, 14 Mar 2018 07:38:23 GMT

←Older revision		Revision as of 07:38, 14 March 2018
Line 1:		Line 1:
		+
	==The Crystal Structure of an NNA7 Fab that recognizes an N-type blood group antigen==		==The Crystal Structure of an NNA7 Fab that recognizes an N-type blood group antigen==
	<StructureSection load='1t2q' size='340' side='right' caption='[[1t2q]], [[Resolution\|resolution]] 1.83Å' scene=''>		<StructureSection load='1t2q' size='340' side='right' caption='[[1t2q]], [[Resolution\|resolution]] 1.83Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">N92 IgG2a ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice]), N92 L chain ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">N92 IgG2a ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice]), N92 L chain ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1t2q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t2q OCA], [http://pdbe.org/1t2q PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1t2q RCSB], [http://www.ebi.ac.uk/pdbsum/1t2q PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1t2q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t2q OCA], [http://pdbe.org/1t2q PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1t2q RCSB], [http://www.ebi.ac.uk/pdbsum/1t2q PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1t2q ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 11:		Line 12:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/t2/1t2q_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/t2/1t2q_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1t2q ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>

	==See Also==		==See Also==
-	*[[Antibody\|Antibody]]	+	*[[Antibody 3D structures\|Antibody 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 10:36, 11 September 2015

OCA — Fri, 11 Sep 2015 10:36:26 GMT

←Older revision		Revision as of 10:36, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='1t2q' size='340' side='right' caption='[[1t2q]], [[Resolution\|resolution]] 1.83Å' scene=''>		<StructureSection load='1t2q' size='340' side='right' caption='[[1t2q]], [[Resolution\|resolution]] 1.83Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1t2q]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Mus_musculus Mus musculus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T2Q OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1T2Q FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1t2q]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T2Q OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1T2Q FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">N92 IgG2a ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 ~~Mus musculus~~]), N92 L chain ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 ~~Mus musculus~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">N92 IgG2a ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice]), N92 L chain ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1t2q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t2q OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1t2q RCSB], [http://www.ebi.ac.uk/pdbsum/1t2q PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1t2q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t2q OCA], [http://pdbe.org/1t2q PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1t2q RCSB], [http://www.ebi.ac.uk/pdbsum/1t2q PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 22:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Mus musculus~~]]	+	[[Category: Lk3 transgenic mice]]
	[[Category: Song, S C]]		[[Category: Song, S C]]
	[[Category: Spitalnik, S L]]		[[Category: Spitalnik, S L]]

OCA at 06:56, 6 January 2015

OCA — Tue, 06 Jan 2015 06:56:03 GMT

←Older revision		Revision as of 06:56, 6 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1t2q]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T2Q OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1T2Q FirstGlance]. <br>		<table><tr><td colspan='2'>[[1t2q]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T2Q OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1T2Q FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">N92 IgG2a ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 Mus musculus]), N92 L chain ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 Mus musculus])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">N92 IgG2a ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 Mus musculus]), N92 L chain ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 Mus musculus])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1t2q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t2q OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1t2q RCSB], [http://www.ebi.ac.uk/pdbsum/1t2q PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1t2q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t2q OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1t2q RCSB], [http://www.ebi.ac.uk/pdbsum/1t2q PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 23:		Line 23:
	</StructureSection>		</StructureSection>
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
-	[[Category: Song, S C.]]	+	[[Category: Song, S C]]
-	[[Category: Spitalnik, S L.]]	+	[[Category: Spitalnik, S L]]
-	[[Category: Wedekind, J E.]]	+	[[Category: Wedekind, J E]]
-	[[Category: Xie, K.]]	+	[[Category: Xie, K]]
	[[Category: Blood group antigen]]		[[Category: Blood group antigen]]
	[[Category: Fab]]		[[Category: Fab]]
	[[Category: Glycophorin some]]		[[Category: Glycophorin some]]
	[[Category: Immune system]]		[[Category: Immune system]]

OCA at 19:29, 28 September 2014

OCA — Sun, 28 Sep 2014 19:29:14 GMT

←Older revision		Revision as of 19:29, 28 September 2014
Line 1:		Line 1:
-	~~[[Image:1t2q.png\|left\|200px]]~~	+	==The Crystal Structure of an NNA7 Fab that recognizes an N-type blood group antigen==
-		+	<StructureSection load='1t2q' size='340' side='right' caption='[[1t2q]], [[Resolution\|resolution]] 1.83Å' scene=''>
-	~~{{STRUCTURE_1t2q\| PDB=1t2q \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[1t2q]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T2Q OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1T2Q FirstGlance]. <br>
-	===The Crystal Structure of an NNA7 Fab that recognizes an N-type blood group antigen===	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene><br>
-		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">N92 IgG2a ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 Mus musculus]), N92 L chain ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 Mus musculus])</td></tr>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1t2q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t2q OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1t2q RCSB], [http://www.ebi.ac.uk/pdbsum/1t2q PDBsum]</span></td></tr>
-	==~~About this Structure~~==	+	<table>
-	[[1t2q]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T2Q OCA].	+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/t2/1t2q_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>

	==See Also==		==See Also==
	*[[Antibody\|Antibody]]		*[[Antibody\|Antibody]]
		+	__TOC__
		+	</StructureSection>
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
	[[Category: Song, S C.]]		[[Category: Song, S C.]]

OCA at 18:14, 20 October 2012

OCA — Sat, 20 Oct 2012 18:14:18 GMT

←Older revision		Revision as of 18:14, 20 October 2012
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	==About this Structure==		==About this Structure==
-	[[1t2q]] is a 2 chain structure ~~of [[Antibody]]~~ with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T2Q OCA].	+	[[1t2q]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T2Q OCA].

	==See Also==		==See Also==

OCA: Protected "1t2q" [edit=sysop:move=sysop]

OCA — Fri, 27 Jul 2012 03:26:56 GMT

Protected "1t2q" [edit=sysop:move=sysop]

←Older revision

Revision as of 03:26, 27 July 2012

OCA at 03:26, 27 July 2012

OCA — Fri, 27 Jul 2012 03:26:54 GMT

←Older revision		Revision as of 03:26, 27 July 2012
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-	{{Seed}}
	[[Image:1t2q.png\|left\|200px]]		[[Image:1t2q.png\|left\|200px]]

-	<!--
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	{{STRUCTURE_1t2q\| PDB=1t2q \| SCENE= }}		{{STRUCTURE_1t2q\| PDB=1t2q \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	~~1T2Q~~ is a 2 ~~chains~~ structure of ~~sequences~~ from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T2Q OCA].	+	[[1t2q]] is a 2 chain structure of [[Antibody]] with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T2Q OCA].
		+
		+	==See Also==
		+	*[[Antibody\|Antibody]]
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
	[[Category: Song, S C.]]		[[Category: Song, S C.]]
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	[[Category: Fab]]		[[Category: Fab]]
	[[Category: Glycophorin some]]		[[Category: Glycophorin some]]
-		+	[[Category: Immune system]]
-	~~''Page seeded by~~ [~~http~~:~~//oca.weizmann.ac.il/oca OCA~~ ] ~~on Tue Feb 17 20:02:44 2009''~~	+

OCA at 18:02, 17 February 2009

OCA — Tue, 17 Feb 2009 18:02:45 GMT

←Older revision		Revision as of 18:02, 17 February 2009
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-	[[Image:1t2q.~~gif~~\|left\|200px]]	+	{{Seed}}
		+	[[Image:1t2q.png\|left\|200px]]

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	{{STRUCTURE_1t2q\| PDB=1t2q \| SCENE= }}		{{STRUCTURE_1t2q\| PDB=1t2q \| SCENE= }}

-	~~'''~~The Crystal Structure of an NNA7 Fab that recognizes an N-type blood group antigen~~'''~~	+	===The Crystal Structure of an NNA7 Fab that recognizes an N-type blood group antigen===


	==About this Structure==		==About this Structure==
-	Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T2Q OCA].	+	1T2Q is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T2Q OCA].
		+	[[Category: Mus musculus]]
	[[Category: Song, S C.]]		[[Category: Song, S C.]]
	[[Category: Spitalnik, S L.]]		[[Category: Spitalnik, S L.]]
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	[[Category: Fab]]		[[Category: Fab]]
	[[Category: Glycophorin some]]		[[Category: Glycophorin some]]
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Sat May 3 09~~:26:~~36 2008~~''	+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 20:02:44 2009''