1tk9 - Revision history

OCA at 06:15, 3 April 2024

OCA — Wed, 03 Apr 2024 06:15:25 GMT

←Older revision		Revision as of 06:15, 3 April 2024
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	<StructureSection load='1tk9' size='340' side='right'caption='[[1tk9]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='1tk9' size='340' side='right'caption='[[1tk9]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1tk9]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~"campylobacter_fetus_subsp._jejuni"_smibert_1974 "campylobacter fetus subsp.~~ jejuni~~" smibert 1974~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TK9 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=1TK9 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1tk9]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TK9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TK9 FirstGlance]. <br>
-	</td></tr><tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"~~><scene name~~=~~'pdbligand=MSE:SELENOMETHIONINE'>MSE</scene~~></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.1Å</td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>LPCA1, GMHA1, CJ1149C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~197~~ "~~Campylobacter fetus subsp. jejuni~~" ~~Smibert 1974])~~</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=1tk9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tk9 OCA], [~~http~~://pdbe.org/1tk9 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1tk9 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1tk9 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1tk9 ProSAT], [~~http~~://www.topsan.org/Proteins/NYSGXRC/1tk9 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tk9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tk9 OCA], [https://pdbe.org/1tk9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tk9 RCSB], [https://www.ebi.ac.uk/pdbsum/1tk9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tk9 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1tk9 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/GMHA1_CAMJE GMHA1_CAMJE]] Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate (By similarity).	+	[https://www.uniprot.org/uniprot/GMHA1_CAMJE GMHA1_CAMJE] Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate (By similarity).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 22:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Campylobacter ~~fetus subsp.~~ jejuni ~~smibert 1974~~]]	+	[[Category: Campylobacter jejuni]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Burley~~, S K~~]]	+	[[Category: Burley SK]]
-	[[Category: Kniewel, R]]	+	[[Category: Kniewel R]]
-	[[Category: Lima~~, C D]]~~	+	[[Category: Lima CD]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Rajashankar KR]]
-	[[Category: Rajashankar~~, K R~~]]	+	[[Category: Solorzano V]]
-	[[Category: Solorzano, V]]	+
-	~~[[Category: Isomerase]]~~	+
-	~~[[Category: Lipopolysaccharide biosynthesis]]~~	+
-	~~[[Category: Lpc1_camje]]~~	+
-	~~[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]~~	+
-	~~[[Category: PSI, Protein structure initiative]]~~	+
-	~~[[Category: T1512~~]]	+

OCA at 11:53, 24 December 2020

OCA — Thu, 24 Dec 2020 11:53:53 GMT

←Older revision		Revision as of 11:53, 24 December 2020
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	==Crystal Structure of Phosphoheptose isomerase 1==		==Crystal Structure of Phosphoheptose isomerase 1==
-	<StructureSection load='1tk9' size='340' side='right' caption='[[1tk9]], [[Resolution\|resolution]] 2.10Å' scene=''>	+	<StructureSection load='1tk9' size='340' side='right'caption='[[1tk9]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1tk9]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"campylobacter_fetus_subsp._jejuni"_smibert_1974 "campylobacter fetus subsp. jejuni" smibert 1974]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TK9 OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1TK9 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1tk9]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"campylobacter_fetus_subsp._jejuni"_smibert_1974 "campylobacter fetus subsp. jejuni" smibert 1974]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TK9 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1TK9 FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LPCA1, GMHA1, CJ1149C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=197 "Campylobacter fetus subsp. jejuni" Smibert 1974])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LPCA1, GMHA1, CJ1149C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=197 "Campylobacter fetus subsp. jejuni" Smibert 1974])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1tk9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tk9 OCA], [http://pdbe.org/1tk9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1tk9 RCSB], [http://www.ebi.ac.uk/pdbsum/1tk9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1tk9 ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/1tk9 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1tk9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tk9 OCA], [http://pdbe.org/1tk9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1tk9 RCSB], [http://www.ebi.ac.uk/pdbsum/1tk9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1tk9 ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/1tk9 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	</StructureSection>		</StructureSection>
	[[Category: Campylobacter fetus subsp. jejuni smibert 1974]]		[[Category: Campylobacter fetus subsp. jejuni smibert 1974]]
		+	[[Category: Large Structures]]
	[[Category: Burley, S K]]		[[Category: Burley, S K]]
	[[Category: Kniewel, R]]		[[Category: Kniewel, R]]

OCA at 08:32, 21 March 2018

OCA — Wed, 21 Mar 2018 08:32:05 GMT

←Older revision		Revision as of 08:32, 21 March 2018
Line 1:		Line 1:
		+
	==Crystal Structure of Phosphoheptose isomerase 1==		==Crystal Structure of Phosphoheptose isomerase 1==
	<StructureSection load='1tk9' size='340' side='right' caption='[[1tk9]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='1tk9' size='340' side='right' caption='[[1tk9]], [[Resolution\|resolution]] 2.10Å' scene=''>
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	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LPCA1, GMHA1, CJ1149C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=197 "Campylobacter fetus subsp. jejuni" Smibert 1974])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LPCA1, GMHA1, CJ1149C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=197 "Campylobacter fetus subsp. jejuni" Smibert 1974])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tk9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tk9 OCA], [http://pdbe.org/1tk9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1tk9 RCSB], [http://www.ebi.ac.uk/pdbsum/1tk9 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/1tk9 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tk9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tk9 OCA], [http://pdbe.org/1tk9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1tk9 RCSB], [http://www.ebi.ac.uk/pdbsum/1tk9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1tk9 ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/1tk9 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 13:		Line 14:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tk/1tk9_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tk/1tk9_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 00:24, 8 February 2016

OCA — Mon, 08 Feb 2016 00:24:21 GMT

←Older revision		Revision as of 00:24, 8 February 2016
Line 17:		Line 17:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1tk9 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 06:11, 10 September 2015

OCA — Thu, 10 Sep 2015 06:11:29 GMT

←Older revision		Revision as of 06:11, 10 September 2015
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	<StructureSection load='1tk9' size='340' side='right' caption='[[1tk9]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='1tk9' size='340' side='right' caption='[[1tk9]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1tk9]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Campylobacter_jejuni Campylobacter~~ jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TK9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1TK9 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1tk9]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"campylobacter_fetus_subsp._jejuni"_smibert_1974 "campylobacter fetus subsp. jejuni" smibert 1974]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TK9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1TK9 FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LPCA1, GMHA1, CJ1149C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=197 Campylobacter jejuni])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LPCA1, GMHA1, CJ1149C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=197 "Campylobacter fetus subsp. jejuni" Smibert 1974])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tk9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tk9 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1tk9 RCSB], [http://www.ebi.ac.uk/pdbsum/1tk9 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/1tk9 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tk9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tk9 OCA], [http://pdbe.org/1tk9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1tk9 RCSB], [http://www.ebi.ac.uk/pdbsum/1tk9 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/1tk9 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 21:		Line 21:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Campylobacter jejuni]]	+	[[Category: Campylobacter fetus subsp. jejuni smibert 1974]]
	[[Category: Burley, S K]]		[[Category: Burley, S K]]
	[[Category: Kniewel, R]]		[[Category: Kniewel, R]]

OCA at 19:13, 24 December 2014

OCA — Wed, 24 Dec 2014 19:13:46 GMT

←Older revision		Revision as of 19:13, 24 December 2014
Line 7:		Line 7:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tk9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tk9 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1tk9 RCSB], [http://www.ebi.ac.uk/pdbsum/1tk9 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/1tk9 TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tk9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tk9 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1tk9 RCSB], [http://www.ebi.ac.uk/pdbsum/1tk9 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/1tk9 TOPSAN]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/GMHA1_CAMJE GMHA1_CAMJE]] Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate (By similarity).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 13:18, 6 November 2014

OCA — Thu, 06 Nov 2014 13:18:37 GMT

←Older revision		Revision as of 13:18, 6 November 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1tk9]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TK9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1TK9 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1tk9]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TK9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1TK9 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LPCA1, GMHA1, CJ1149C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=197 Campylobacter jejuni])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LPCA1, GMHA1, CJ1149C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=197 Campylobacter jejuni])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tk9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tk9 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1tk9 RCSB], [http://www.ebi.ac.uk/pdbsum/1tk9 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/1tk9 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tk9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tk9 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1tk9 RCSB], [http://www.ebi.ac.uk/pdbsum/1tk9 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/1tk9 TOPSAN]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 20:		Line 20:
	</StructureSection>		</StructureSection>
	[[Category: Campylobacter jejuni]]		[[Category: Campylobacter jejuni]]
-	[[Category: Burley, S K.]]	+	[[Category: Burley, S K]]
-	[[Category: Kniewel, R.]]	+	[[Category: Kniewel, R]]
-	[[Category: Lima, C D.]]	+	[[Category: Lima, C D]]
-	[[Category: ~~NYSGXRC, New York SGX Research Center for~~ Structural ~~Genomics.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Rajashankar, K R.]]	+	[[Category: Rajashankar, K R]]
-	[[Category: Solorzano, V.]]	+	[[Category: Solorzano, V]]
	[[Category: Isomerase]]		[[Category: Isomerase]]
	[[Category: Lipopolysaccharide biosynthesis]]		[[Category: Lipopolysaccharide biosynthesis]]
	[[Category: Lpc1_camje]]		[[Category: Lpc1_camje]]
-	[[Category: New ~~york sgx research center~~ for ~~structural genomic]]~~	+	[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
-	~~[[Category: Nysgxrc~~]]	+	[[Category: PSI, Protein structure initiative]]
-	[[Category: Protein structure initiative]]	+
-	~~[[Category: Psi]]~~	+
-	~~[[Category: Structural genomic~~]]	+
	[[Category: T1512]]		[[Category: T1512]]

OCA at 19:54, 29 September 2014

OCA — Mon, 29 Sep 2014 19:54:20 GMT

←Older revision		Revision as of 19:54, 29 September 2014
Line 1:		Line 1:
-	~~[[Image:1tk9.png\|left\|200px]]~~	+	==Crystal Structure of Phosphoheptose isomerase 1==
-		+	<StructureSection load='1tk9' size='340' side='right' caption='[[1tk9]], [[Resolution\|resolution]] 2.10Å' scene=''>
-	~~{{STRUCTURE_1tk9\| PDB=1tk9 \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[1tk9]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TK9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1TK9 FirstGlance]. <br>
-	===Crystal Structure of Phosphoheptose isomerase 1===	+	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LPCA1, GMHA1, CJ1149C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=197 Campylobacter jejuni])</td></tr>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tk9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tk9 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1tk9 RCSB], [http://www.ebi.ac.uk/pdbsum/1tk9 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/1tk9 TOPSAN]</span></td></tr>
-	==~~About this Structure~~==	+	<table>
-	[[1tk9]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TK9 OCA].	+	== Evolutionary Conservation ==
-		+	[[Image:Consurf_key_small.gif\|200px\|right]]
-	==~~Reference~~==	+	Check<jmol>
-	<~~ref group~~="~~xtra~~">~~PMID~~:~~016477602~~</~~ref~~><~~references group~~="~~xtra~~"/>	+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tk/1tk9_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Campylobacter jejuni]]		[[Category: Campylobacter jejuni]]
	[[Category: Burley, S K.]]		[[Category: Burley, S K.]]

OCA: Protected "1tk9" [edit=sysop:move=sysop]

OCA — Sat, 05 Jan 2013 13:18:23 GMT

Protected "1tk9" [edit=sysop:move=sysop]

←Older revision

Revision as of 13:18, 5 January 2013

OCA at 13:18, 5 January 2013

OCA — Sat, 05 Jan 2013 13:18:18 GMT

←Older revision		Revision as of 13:18, 5 January 2013
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-	{{Seed}}
	[[Image:1tk9.png\|left\|200px]]		[[Image:1tk9.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1tk9", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_1tk9\| PDB=1tk9 \| SCENE= }}		{{STRUCTURE_1tk9\| PDB=1tk9 \| SCENE= }}

Line 14:		Line 7:

	==About this Structure==		==About this Structure==
-	~~1TK9~~ is a 4 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TK9 OCA].	+	[[1tk9]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TK9 OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~16477602~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:016477602</ref><references group="xtra"/>
	[[Category: Campylobacter jejuni]]		[[Category: Campylobacter jejuni]]
	[[Category: Burley, S K.]]		[[Category: Burley, S K.]]
	[[Category: Kniewel, R.]]		[[Category: Kniewel, R.]]
	[[Category: Lima, C D.]]		[[Category: Lima, C D.]]
-	[[Category: NYSGXRC, New York ~~Structural GenomiX~~ Research ~~Consortium~~.]]	+	[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
	[[Category: Rajashankar, K R.]]		[[Category: Rajashankar, K R.]]
	[[Category: Solorzano, V.]]		[[Category: Solorzano, V.]]
		+	[[Category: Isomerase]]
	[[Category: Lipopolysaccharide biosynthesis]]		[[Category: Lipopolysaccharide biosynthesis]]
	[[Category: Lpc1_camje]]		[[Category: Lpc1_camje]]
-	[[Category: New york ~~structural genomix~~ research ~~consortium~~]]	+	[[Category: New york sgx research center for structural genomic]]
	[[Category: Nysgxrc]]		[[Category: Nysgxrc]]
	[[Category: Protein structure initiative]]		[[Category: Protein structure initiative]]
Line 33:		Line 27:
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: T1512]]		[[Category: T1512]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 17:29:03 2009''