1u0k - Revision history

OCA at 08:45, 1 May 2024

OCA — Wed, 01 May 2024 08:45:58 GMT

←Older revision		Revision as of 08:45, 1 May 2024
Line 3:		Line 3:
	<StructureSection load='1u0k' size='340' side='right'caption='[[1u0k]], [[Resolution\|resolution]] 1.50Å' scene=''>		<StructureSection load='1u0k' size='340' side='right'caption='[[1u0k]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1u0k]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Pseae Pseae~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U0K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1U0K FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1u0k]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U0K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1U0K FirstGlance]. <br>
-	</td></tr><tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"~~><scene name~~=~~'pdbligand=MSE:SELENOMETHIONINE'>MSE</scene~~></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.5Å</td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat">~~PA4716 ([https~~:/~~/www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 PSEAE])~~</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1u0k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1u0k OCA], [https://pdbe.org/1u0k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1u0k RCSB], [https://www.ebi.ac.uk/pdbsum/1u0k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1u0k ProSAT], [https://www.topsan.org/Proteins/MCSG/1u0k TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1u0k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1u0k OCA], [https://pdbe.org/1u0k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1u0k RCSB], [https://www.ebi.ac.uk/pdbsum/1u0k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1u0k ProSAT], [https://www.topsan.org/Proteins/MCSG/1u0k TOPSAN]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q9HV82_PSEAE Q9HV82_PSEAE]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 21:		Line 23:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Pseae~~]]	+	[[Category: Pseudomonas aeruginosa PAO1]]
-	[[Category: Cuff~~, M E~~]]	+	[[Category: Cuff ME]]
-	[[Category: Edwards, A]]	+	[[Category: Edwards A]]
-	[[Category: Ginell~~, S L~~]]	+	[[Category: Ginell SL]]
-	[[Category: Joachimiak, A]]	+	[[Category: Joachimiak A]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Rotella FJ]]
-	[[Category: Rotella~~, F J~~]]	+	[[Category: Savchenko A]]
-	[[Category: Savchenko, A]]	+	[[Category: Xu X]]
-	[[Category: Xu, X]]	+
-	~~[[Category: Mcsg]]~~	+
-	~~[[Category: PSI, Protein structure initiative]]~~	+
-	~~[[Category: Pseudomonas aeruginosa]]~~	+
-	~~[[Category: Sctructural genomic]]~~	+
-	~~[[Category: Unknown function~~]]	+

OCA at 10:49, 19 May 2021

OCA — Wed, 19 May 2021 10:49:25 GMT

←Older revision		Revision as of 10:49, 19 May 2021
Line 3:		Line 3:
	<StructureSection load='1u0k' size='340' side='right'caption='[[1u0k]], [[Resolution\|resolution]] 1.50Å' scene=''>		<StructureSection load='1u0k' size='340' side='right'caption='[[1u0k]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1u0k]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Pseae Pseae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U0K OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1U0K FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1u0k]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseae Pseae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U0K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1U0K FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PA4716 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 PSEAE])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PA4716 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 PSEAE])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1u0k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1u0k OCA], [~~http~~://pdbe.org/1u0k PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1u0k RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1u0k PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1u0k ProSAT], [~~http~~://www.topsan.org/Proteins/MCSG/1u0k TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1u0k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1u0k OCA], [https://pdbe.org/1u0k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1u0k RCSB], [https://www.ebi.ac.uk/pdbsum/1u0k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1u0k ProSAT], [https://www.topsan.org/Proteins/MCSG/1u0k TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 17:02, 14 August 2019

OCA — Wed, 14 Aug 2019 17:02:17 GMT

←Older revision		Revision as of 17:02, 14 August 2019
Line 1:		Line 1:

	==The structure of a Predicted Epimerase PA4716 from Pseudomonas aeruginosa==		==The structure of a Predicted Epimerase PA4716 from Pseudomonas aeruginosa==
-	<StructureSection load='1u0k' size='340' side='right' caption='[[1u0k]], [[Resolution\|resolution]] 1.50Å' scene=''>	+	<StructureSection load='1u0k' size='340' side='right'caption='[[1u0k]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1u0k]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseae Pseae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U0K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1U0K FirstGlance]. <br>		<table><tr><td colspan='2'>[[1u0k]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseae Pseae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U0K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1U0K FirstGlance]. <br>
Line 20:		Line 20:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Pseae]]		[[Category: Pseae]]
	[[Category: Cuff, M E]]		[[Category: Cuff, M E]]
	[[Category: Edwards, A]]		[[Category: Edwards, A]]
-	[[Category: Ginell, S J]]	+	[[Category: Ginell, S L]]
	[[Category: Joachimiak, A]]		[[Category: Joachimiak, A]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]

OCA at 08:33, 21 March 2018

OCA — Wed, 21 Mar 2018 08:33:36 GMT

←Older revision		Revision as of 08:33, 21 March 2018
Line 1:		Line 1:
		+
	==The structure of a Predicted Epimerase PA4716 from Pseudomonas aeruginosa==		==The structure of a Predicted Epimerase PA4716 from Pseudomonas aeruginosa==
	<StructureSection load='1u0k' size='340' side='right' caption='[[1u0k]], [[Resolution\|resolution]] 1.50Å' scene=''>		<StructureSection load='1u0k' size='340' side='right' caption='[[1u0k]], [[Resolution\|resolution]] 1.50Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PA4716 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 PSEAE])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PA4716 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 PSEAE])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1u0k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1u0k OCA], [http://pdbe.org/1u0k PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1u0k RCSB], [http://www.ebi.ac.uk/pdbsum/1u0k PDBsum], [http://www.topsan.org/Proteins/MCSG/1u0k TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1u0k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1u0k OCA], [http://pdbe.org/1u0k PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1u0k RCSB], [http://www.ebi.ac.uk/pdbsum/1u0k PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1u0k ProSAT], [http://www.topsan.org/Proteins/MCSG/1u0k TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 11:		Line 12:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/u0/1u0k_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/u0/1u0k_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 19:48, 8 February 2016

OCA — Mon, 08 Feb 2016 19:48:02 GMT

←Older revision		Revision as of 19:48, 8 February 2016
Line 15:		Line 15:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1u0k ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 14:48, 10 September 2015

OCA — Thu, 10 Sep 2015 14:48:56 GMT

←Older revision		Revision as of 14:48, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='1u0k' size='340' side='right' caption='[[1u0k]], [[Resolution\|resolution]] 1.50Å' scene=''>		<StructureSection load='1u0k' size='340' side='right' caption='[[1u0k]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1u0k]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Pseudomonas_aeruginosa Pseudomonas aeruginosa~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U0K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1U0K FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1u0k]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseae Pseae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U0K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1U0K FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PA4716 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~287 Pseudomonas aeruginosa~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PA4716 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 PSEAE])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1u0k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1u0k OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1u0k RCSB], [http://www.ebi.ac.uk/pdbsum/1u0k PDBsum], [http://www.topsan.org/Proteins/MCSG/1u0k TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1u0k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1u0k OCA], [http://pdbe.org/1u0k PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1u0k RCSB], [http://www.ebi.ac.uk/pdbsum/1u0k PDBsum], [http://www.topsan.org/Proteins/MCSG/1u0k TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 19:		Line 19:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Pseudomonas aeruginosa~~]]	+	[[Category: Pseae]]
	[[Category: Cuff, M E]]		[[Category: Cuff, M E]]
	[[Category: Edwards, A]]		[[Category: Edwards, A]]
Line 30:		Line 30:
	[[Category: Mcsg]]		[[Category: Mcsg]]
	[[Category: PSI, Protein structure initiative]]		[[Category: PSI, Protein structure initiative]]
		+	[[Category: Pseudomonas aeruginosa]]
	[[Category: Sctructural genomic]]		[[Category: Sctructural genomic]]
	[[Category: Unknown function]]		[[Category: Unknown function]]

OCA at 12:31, 6 January 2015

OCA — Tue, 06 Jan 2015 12:31:15 GMT

←Older revision		Revision as of 12:31, 6 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1u0k]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U0K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1U0K FirstGlance]. <br>		<table><tr><td colspan='2'>[[1u0k]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U0K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1U0K FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PA4716 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 Pseudomonas aeruginosa])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PA4716 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 Pseudomonas aeruginosa])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1u0k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1u0k OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1u0k RCSB], [http://www.ebi.ac.uk/pdbsum/1u0k PDBsum], [http://www.topsan.org/Proteins/MCSG/1u0k TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1u0k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1u0k OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1u0k RCSB], [http://www.ebi.ac.uk/pdbsum/1u0k PDBsum], [http://www.topsan.org/Proteins/MCSG/1u0k TOPSAN]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 20:		Line 20:
	</StructureSection>		</StructureSection>
	[[Category: Pseudomonas aeruginosa]]		[[Category: Pseudomonas aeruginosa]]
-	[[Category: Cuff, M E.]]	+	[[Category: Cuff, M E]]
-	[[Category: Edwards, A.]]	+	[[Category: Edwards, A]]
-	[[Category: Ginell, S J.]]	+	[[Category: Ginell, S J]]
-	[[Category: Joachimiak, A.]]	+	[[Category: Joachimiak, A]]
-	[[Category: ~~MCSG, Midwest Center for~~ Structural ~~Genomics.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Rotella, F J.]]	+	[[Category: Rotella, F J]]
-	[[Category: Savchenko, A.]]	+	[[Category: Savchenko, A]]
-	[[Category: Xu, X.]]	+	[[Category: Xu, X]]
	[[Category: Mcsg]]		[[Category: Mcsg]]
-	[[Category: ~~Midwest center for structural genomic]]~~	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category:~~ Protein structure initiative]]	+
-	~~[[Category: Pseudomonas aeruginosa]]~~	+
-	~~[[Category: Psi~~]]	+
	[[Category: Sctructural genomic]]		[[Category: Sctructural genomic]]
-	[[Category: Structural genomic]]
	[[Category: Unknown function]]		[[Category: Unknown function]]

OCA at 21:22, 29 September 2014

OCA — Mon, 29 Sep 2014 21:22:05 GMT

←Older revision		Revision as of 21:22, 29 September 2014
Line 1:		Line 1:
-	~~[[Image:1u0k.png\|left\|200px]]~~	+	==The structure of a Predicted Epimerase PA4716 from Pseudomonas aeruginosa==
-		+	<StructureSection load='1u0k' size='340' side='right' caption='[[1u0k]], [[Resolution\|resolution]] 1.50Å' scene=''>
-	~~{{STRUCTURE_1u0k\| PDB=1u0k \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[1u0k]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U0K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1U0K FirstGlance]. <br>
-	===The structure of a Predicted Epimerase PA4716 from Pseudomonas aeruginosa===	+	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PA4716 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 Pseudomonas aeruginosa])</td></tr>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1u0k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1u0k OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1u0k RCSB], [http://www.ebi.ac.uk/pdbsum/1u0k PDBsum], [http://www.topsan.org/Proteins/MCSG/1u0k TOPSAN]</span></td></tr>
-	==~~About this Structure~~==	+	<table>
-	[[1u0k]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U0K OCA].	+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/u0/1u0k_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Pseudomonas aeruginosa]]		[[Category: Pseudomonas aeruginosa]]
	[[Category: Cuff, M E.]]		[[Category: Cuff, M E.]]

OCA: Protected "1u0k" [edit=sysop:move=sysop]

OCA — Sat, 05 Jan 2013 12:33:18 GMT

Protected "1u0k" [edit=sysop:move=sysop]

←Older revision

Revision as of 12:33, 5 January 2013

OCA at 12:33, 5 January 2013

OCA — Sat, 05 Jan 2013 12:33:16 GMT

←Older revision		Revision as of 12:33, 5 January 2013
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-	{{Seed}}
	[[Image:1u0k.png\|left\|200px]]		[[Image:1u0k.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1u0k", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
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	{{STRUCTURE_1u0k\| PDB=1u0k \| SCENE= }}		{{STRUCTURE_1u0k\| PDB=1u0k \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	~~1U0K~~ is a 2 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/~~Pseudomonas_aeruginosa_pao1~~ Pseudomonas aeruginosa ~~pao1~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U0K OCA].	+	[[1u0k]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U0K OCA].
-	[[Category: Pseudomonas aeruginosa ~~pao1~~]]	+	[[Category: Pseudomonas aeruginosa]]
	[[Category: Cuff, M E.]]		[[Category: Cuff, M E.]]
	[[Category: Edwards, A.]]		[[Category: Edwards, A.]]
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	[[Category: Sctructural genomic]]		[[Category: Sctructural genomic]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
-		+	[[Category: Unknown function]]
-	~~''Page seeded by~~ [~~http~~:~~//oca.weizmann.ac.il/oca OCA~~ ] ~~on Sun Nov 16 17:03:09 2008''~~	+