1um1 - Revision history

OCA at 23:56, 27 December 2023

OCA — Wed, 27 Dec 2023 23:56:04 GMT

←Older revision		Revision as of 23:56, 27 December 2023
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	==Solution Structure of RSGI RUH-007, PDZ domain in Human cDNA==		==Solution Structure of RSGI RUH-007, PDZ domain in Human cDNA==
-	<StructureSection load='1um1' size='340' side='right'caption='[[1um1~~]], [[NMR_Ensembles_of_Models \| 20 NMR models~~]]' scene=''>	+	<StructureSection load='1um1' size='340' side='right'caption='[[1um1]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1um1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Human Human~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UM1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UM1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1um1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UM1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UM1 FirstGlance]. <br>
-	</td></tr><tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>Kazusa cDNA KIAA1849 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~9606 HUMAN])~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1um1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1um1 OCA], [https://pdbe.org/1um1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1um1 RCSB], [https://www.ebi.ac.uk/pdbsum/1um1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1um1 ProSAT], [https://www.topsan.org/Proteins/RSGI/1um1 TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1um1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1um1 OCA], [https://pdbe.org/1um1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1um1 RCSB], [https://www.ebi.ac.uk/pdbsum/1um1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1um1 ProSAT], [https://www.topsan.org/Proteins/RSGI/1um1 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/RADIL_HUMAN RADIL_HUMAN]] Downstream effector of Rap required for cell adhesion and migration of neural crest precursors during development.<ref>PMID:17704304</ref>	+	[https://www.uniprot.org/uniprot/RADIL_HUMAN RADIL_HUMAN] Downstream effector of Rap required for cell adhesion and migration of neural crest precursors during development.<ref>PMID:17704304</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Human~~]]	+	[[Category: Homo sapiens]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Doi-Katayama, Y]]	+	[[Category: Doi-Katayama Y]]
-	[[Category: Hayashi, F]]	+	[[Category: Hayashi F]]
-	[[Category: Hirota, H]]	+	[[Category: Hirota H]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Yokoyama S]]
-	[[Category: Yokoyama, S]]	+
-	~~[[Category: Human cdna]]~~	+
-	~~[[Category: Pdz domain]]~~	+
-	~~[[Category: Rsgi]]~~	+
-	~~[[Category: Unknown function~~]]	+

OCA at 06:46, 2 March 2022

OCA — Wed, 02 Mar 2022 06:46:47 GMT

←Older revision		Revision as of 06:46, 2 March 2022
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	<StructureSection load='1um1' size='340' side='right'caption='[[1um1]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='1um1' size='340' side='right'caption='[[1um1]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1um1]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UM1 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=1UM1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1um1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UM1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UM1 FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Kazusa cDNA KIAA1849 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Kazusa cDNA KIAA1849 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=1um1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1um1 OCA], [~~http~~://pdbe.org/1um1 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1um1 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1um1 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1um1 ProSAT], [~~http~~://www.topsan.org/Proteins/RSGI/1um1 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1um1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1um1 OCA], [https://pdbe.org/1um1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1um1 RCSB], [https://www.ebi.ac.uk/pdbsum/1um1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1um1 ProSAT], [https://www.topsan.org/Proteins/RSGI/1um1 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/RADIL_HUMAN RADIL_HUMAN]] Downstream effector of Rap required for cell adhesion and migration of neural crest precursors during development.<ref>PMID:17704304</ref>	+	[[https://www.uniprot.org/uniprot/RADIL_HUMAN RADIL_HUMAN]] Downstream effector of Rap required for cell adhesion and migration of neural crest precursors during development.<ref>PMID:17704304</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 07:29, 30 December 2020

OCA — Wed, 30 Dec 2020 07:29:56 GMT

←Older revision		Revision as of 07:29, 30 December 2020
Line 1:		Line 1:

	==Solution Structure of RSGI RUH-007, PDZ domain in Human cDNA==		==Solution Structure of RSGI RUH-007, PDZ domain in Human cDNA==
-	<StructureSection load='1um1' size='340' side='right' caption='[[1um1]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>	+	<StructureSection load='1um1' size='340' side='right'caption='[[1um1]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1um1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UM1 OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1UM1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1um1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UM1 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1UM1 FirstGlance]. <br>
	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Kazusa cDNA KIAA1849 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>		</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Kazusa cDNA KIAA1849 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1um1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1um1 OCA], [http://pdbe.org/1um1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1um1 RCSB], [http://www.ebi.ac.uk/pdbsum/1um1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1um1 ProSAT], [http://www.topsan.org/Proteins/RSGI/1um1 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1um1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1um1 OCA], [http://pdbe.org/1um1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1um1 RCSB], [http://www.ebi.ac.uk/pdbsum/1um1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1um1 ProSAT], [http://www.topsan.org/Proteins/RSGI/1um1 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 24:		Line 24:
	</StructureSection>		</StructureSection>
	[[Category: Human]]		[[Category: Human]]
		+	[[Category: Large Structures]]
	[[Category: Doi-Katayama, Y]]		[[Category: Doi-Katayama, Y]]
	[[Category: Hayashi, F]]		[[Category: Hayashi, F]]

OCA at 08:01, 28 March 2018

OCA — Wed, 28 Mar 2018 08:01:07 GMT

←Older revision		Revision as of 08:01, 28 March 2018
Line 1:		Line 1:
		+
	==Solution Structure of RSGI RUH-007, PDZ domain in Human cDNA==		==Solution Structure of RSGI RUH-007, PDZ domain in Human cDNA==
	<StructureSection load='1um1' size='340' side='right' caption='[[1um1]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='1um1' size='340' side='right' caption='[[1um1]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[1um1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UM1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UM1 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1um1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UM1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UM1 FirstGlance]. <br>
	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Kazusa cDNA KIAA1849 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>		</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Kazusa cDNA KIAA1849 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1um1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1um1 OCA], [http://pdbe.org/1um1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1um1 RCSB], [http://www.ebi.ac.uk/pdbsum/1um1 PDBsum], [http://www.topsan.org/Proteins/RSGI/1um1 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1um1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1um1 OCA], [http://pdbe.org/1um1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1um1 RCSB], [http://www.ebi.ac.uk/pdbsum/1um1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1um1 ProSAT], [http://www.topsan.org/Proteins/RSGI/1um1 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/um/1um1_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/um/1um1_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 20:27, 8 February 2016

OCA — Mon, 08 Feb 2016 20:27:20 GMT

←Older revision		Revision as of 20:27, 8 February 2016
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	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1um1 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	== References ==		== References ==

OCA at 15:07, 10 September 2015

OCA — Thu, 10 Sep 2015 15:07:11 GMT

←Older revision		Revision as of 15:07, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='1um1' size='340' side='right' caption='[[1um1]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='1um1' size='340' side='right' caption='[[1um1]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1um1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Homo_sapiens Homo sapiens~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UM1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UM1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1um1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UM1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UM1 FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Kazusa cDNA KIAA1849 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 ~~Homo sapiens~~])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Kazusa cDNA KIAA1849 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1um1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1um1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1um1 RCSB], [http://www.ebi.ac.uk/pdbsum/1um1 PDBsum], [http://www.topsan.org/Proteins/RSGI/1um1 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1um1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1um1 OCA], [http://pdbe.org/1um1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1um1 RCSB], [http://www.ebi.ac.uk/pdbsum/1um1 PDBsum], [http://www.topsan.org/Proteins/RSGI/1um1 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[http://www.uniprot.org/uniprot/~~K1849_HUMAN K1849_HUMAN~~]] Downstream effector of Rap required for cell adhesion and migration of neural crest precursors during development.<ref>PMID:17704304</ref>	+	[[http://www.uniprot.org/uniprot/RADIL_HUMAN RADIL_HUMAN]] Downstream effector of Rap required for cell adhesion and migration of neural crest precursors during development.<ref>PMID:17704304</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Homo sapiens~~]]	+	[[Category: Human]]
	[[Category: Doi-Katayama, Y]]		[[Category: Doi-Katayama, Y]]
	[[Category: Hayashi, F]]		[[Category: Hayashi, F]]

OCA at 01:56, 25 December 2014

OCA — Thu, 25 Dec 2014 01:56:17 GMT

←Older revision		Revision as of 01:56, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1um1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UM1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UM1 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1um1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UM1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UM1 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Kazusa cDNA KIAA1849 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Kazusa cDNA KIAA1849 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1um1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1um1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1um1 RCSB], [http://www.ebi.ac.uk/pdbsum/1um1 PDBsum], [http://www.topsan.org/Proteins/RSGI/1um1 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1um1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1um1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1um1 RCSB], [http://www.ebi.ac.uk/pdbsum/1um1 PDBsum], [http://www.topsan.org/Proteins/RSGI/1um1 TOPSAN]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/K1849_HUMAN K1849_HUMAN]] Downstream effector of Rap required for cell adhesion and migration of neural crest precursors during development.<ref>PMID:17704304</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
-	[[Category: Doi-Katayama, Y.]]	+	[[Category: Doi-Katayama, Y]]
-	[[Category: Hayashi, F.]]	+	[[Category: Hayashi, F]]
-	[[Category: Hirota, H.]]	+	[[Category: Hirota, H]]
-	[[Category: ~~RSGI, RIKEN~~ Structural ~~Genomics/Proteomics Initiative.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Yokoyama, S.]]	+	[[Category: Yokoyama, S]]
	[[Category: Human cdna]]		[[Category: Human cdna]]
	[[Category: Pdz domain]]		[[Category: Pdz domain]]
-	[[Category: Riken structural genomics/proteomics initiative]]
	[[Category: Rsgi]]		[[Category: Rsgi]]
-	[[Category: Structural genomic]]
	[[Category: Unknown function]]		[[Category: Unknown function]]

OCA at 21:31, 29 September 2014

OCA — Mon, 29 Sep 2014 21:31:57 GMT

←Older revision		Revision as of 21:31, 29 September 2014
Line 1:		Line 1:
-	~~[[Image:1um1.png\|left\|200px]]~~	+	==Solution Structure of RSGI RUH-007, PDZ domain in Human cDNA==
-		+	<StructureSection load='1um1' size='340' side='right' caption='[[1um1]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
-	~~{{STRUCTURE_1um1\| PDB=1um1 \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[1um1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UM1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UM1 FirstGlance]. <br>
-	===Solution Structure of RSGI RUH-007, PDZ domain in Human cDNA===	+	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Kazusa cDNA KIAA1849 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1um1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1um1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1um1 RCSB], [http://www.ebi.ac.uk/pdbsum/1um1 PDBsum], [http://www.topsan.org/Proteins/RSGI/1um1 TOPSAN]</span></td></tr>
-		+	<table>
-	==~~About this Structure~~==	+	== Evolutionary Conservation ==
-	[[1um1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UM1 OCA].	+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/um/1um1_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
	[[Category: Doi-Katayama, Y.]]		[[Category: Doi-Katayama, Y.]]

OCA: Protected "1um1" [edit=sysop:move=sysop]

OCA — Sat, 05 Jan 2013 12:50:01 GMT

Protected "1um1" [edit=sysop:move=sysop]

←Older revision

Revision as of 12:50, 5 January 2013

OCA at 12:49, 5 January 2013

OCA — Sat, 05 Jan 2013 12:49:58 GMT

←Older revision		Revision as of 12:49, 5 January 2013
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-	{{Seed}}
	[[Image:1um1.png\|left\|200px]]		[[Image:1um1.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1um1", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_1um1\| PDB=1um1 \| SCENE= }}		{{STRUCTURE_1um1\| PDB=1um1 \| SCENE= }}

Line 14:		Line 7:

	==About this Structure==		==About this Structure==
-	~~1UM1~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UM1 OCA].	+	[[1um1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UM1 OCA].
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
	[[Category: Doi-Katayama, Y.]]		[[Category: Doi-Katayama, Y.]]
Line 26:		Line 19:
	[[Category: Rsgi]]		[[Category: Rsgi]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
-		+	[[Category: Unknown function]]
-	~~''Page seeded by~~ [~~http~~:~~//oca.weizmann.ac.il/oca OCA~~ ] ~~on Sun Nov 16 17:35:30 2008''~~	+