1uxz - Revision history

OCA at 13:03, 13 December 2023

OCA — Wed, 13 Dec 2023 13:03:26 GMT

←Older revision		Revision as of 13:03, 13 December 2023
Line 3:		Line 3:
	<StructureSection load='1uxz' size='340' side='right'caption='[[1uxz]], [[Resolution\|resolution]] 1.40Å' scene=''>		<StructureSection load='1uxz' size='340' side='right'caption='[[1uxz]], [[Resolution\|resolution]] 1.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1uxz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Acm_2601 Acm 2601~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UXZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UXZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1uxz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cellvibrio_mixtus Cellvibrio mixtus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UXZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UXZ FirstGlance]. <br>
-	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat">~~<div style='overflow: auto; max~~-~~height: 3em;'>[[1uy0\|1uy0]]~~, [[~~1uyx~~\|~~1uyx~~]]~~, [[1uyy\|1uyy]], [[1uyz\|1uyz]], [[1uz0\|1uz0]]</div>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.4Å</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1uxz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uxz OCA], [https://pdbe.org/1uxz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1uxz RCSB], [https://www.ebi.ac.uk/pdbsum/1uxz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1uxz ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1uxz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uxz OCA], [https://pdbe.org/1uxz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1uxz RCSB], [https://www.ebi.ac.uk/pdbsum/1uxz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1uxz ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/O07653_9GAMM O07653_9GAMM]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 30:		Line 32:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Acm 2601~~]]	+	[[Category: Cellvibrio mixtus]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Bolam, D]]	+	[[Category: Bolam D]]
-	[[Category: Czjzek, M]]	+	[[Category: Czjzek M]]
-	[[Category: Gilbert~~, H J~~]]	+	[[Category: Gilbert HJ]]
-	[[Category: Henrissat, B]]	+	[[Category: Henrissat B]]
-	[[Category: Henshaw, J]]	+	[[Category: Henshaw J]]
-	[[Category: Pires~~, V M.R~~]]	+	[[Category: Pires VMR]]
-	[[Category: Prates~~, J A.M]]~~	+	[[Category: Prates JAM]]
-	~~[[Category: 3-1]]~~	+
-	~~[[Category: Linked glucan]]~~	+
-	~~[[Category: Carbohydrate binding module]]~~	+
-	~~[[Category: Cbm6]]~~	+
-	~~[[Category: Mixted beta1~~]]	+

OCA at 06:20, 6 October 2021

OCA — Wed, 06 Oct 2021 06:20:28 GMT

←Older revision		Revision as of 06:20, 6 October 2021
Line 3:		Line 3:
	<StructureSection load='1uxz' size='340' side='right'caption='[[1uxz]], [[Resolution\|resolution]] 1.40Å' scene=''>		<StructureSection load='1uxz' size='340' side='right'caption='[[1uxz]], [[Resolution\|resolution]] 1.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1uxz]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Acm_2601 Acm 2601]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UXZ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1UXZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1uxz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acm_2601 Acm 2601]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UXZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UXZ FirstGlance]. <br>
-	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1uy0\|1uy0]], [[1uyx\|1uyx]], [[1uyy\|1uyy]], [[1uyz\|1uyz]], [[1uz0\|1uz0]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1uy0\|1uy0]], [[1uyx\|1uyx]], [[1uyy\|1uyy]], [[1uyz\|1uyz]], [[1uz0\|1uz0]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1uxz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uxz OCA], [~~http~~://pdbe.org/1uxz PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1uxz RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1uxz PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1uxz ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1uxz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uxz OCA], [https://pdbe.org/1uxz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1uxz RCSB], [https://www.ebi.ac.uk/pdbsum/1uxz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1uxz ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 13:19, 1 January 2020

OCA — Wed, 01 Jan 2020 13:19:54 GMT

←Older revision		Revision as of 13:19, 1 January 2020
Line 1:		Line 1:

	==Carbohydrate binding module (CBM6cm-2) from Cellvibrio mixtus lichenase 5A==		==Carbohydrate binding module (CBM6cm-2) from Cellvibrio mixtus lichenase 5A==
-	<StructureSection load='1uxz' size='340' side='right' caption='[[1uxz]], [[Resolution\|resolution]] 1.40Å' scene=''>	+	<StructureSection load='1uxz' size='340' side='right'caption='[[1uxz]], [[Resolution\|resolution]] 1.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1uxz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Acm_2601 Acm 2601]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UXZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UXZ FirstGlance]. <br>		<table><tr><td colspan='2'>[[1uxz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Acm_2601 Acm 2601]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UXZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UXZ FirstGlance]. <br>
Line 31:		Line 31:
	</StructureSection>		</StructureSection>
	[[Category: Acm 2601]]		[[Category: Acm 2601]]
		+	[[Category: Large Structures]]
	[[Category: Bolam, D]]		[[Category: Bolam, D]]
	[[Category: Czjzek, M]]		[[Category: Czjzek, M]]

OCA at 08:09, 28 March 2018

OCA — Wed, 28 Mar 2018 08:09:34 GMT

←Older revision		Revision as of 08:09, 28 March 2018
Line 1:		Line 1:
-	==~~CARBOHYDRATE BINDING MODULE~~ (~~CBM6CM~~-2) ~~FROM CELLVIBRIO MIXTUS LICHENASE~~ 5A==	+
		+	==Carbohydrate binding module (CBM6cm-2) from Cellvibrio mixtus lichenase 5A==
	<StructureSection load='1uxz' size='340' side='right' caption='[[1uxz]], [[Resolution\|resolution]] 1.40Å' scene=''>		<StructureSection load='1uxz' size='340' side='right' caption='[[1uxz]], [[Resolution\|resolution]] 1.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1uxz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Acm_2601 Acm 2601]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UXZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UXZ FirstGlance]. <br>		<table><tr><td colspan='2'>[[1uxz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Acm_2601 Acm 2601]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UXZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UXZ FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1uy0\|1uy0]], [[1uyx\|1uyx]], [[1uyy\|1uyy]], [[1uyz\|1uyz]], [[1uz0\|1uz0]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1uy0\|1uy0]], [[1uyx\|1uyx]], [[1uyy\|1uyy]], [[1uyz\|1uyz]], [[1uz0\|1uz0]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1uxz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uxz OCA], [http://pdbe.org/1uxz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1uxz RCSB], [http://www.ebi.ac.uk/pdbsum/1uxz PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1uxz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uxz OCA], [http://pdbe.org/1uxz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1uxz RCSB], [http://www.ebi.ac.uk/pdbsum/1uxz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1uxz ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 10:		Line 11:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ux/1uxz_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ux/1uxz_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1uxz ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 16:20, 11 September 2015

OCA — Fri, 11 Sep 2015 16:20:00 GMT

←Older revision		Revision as of 16:20, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='1uxz' size='340' side='right' caption='[[1uxz]], [[Resolution\|resolution]] 1.40Å' scene=''>		<StructureSection load='1uxz' size='340' side='right' caption='[[1uxz]], [[Resolution\|resolution]] 1.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1uxz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Cellvibrio_mixtus Cellvibrio mixtus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UXZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UXZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1uxz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Acm_2601 Acm 2601]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UXZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UXZ FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1uy0\|1uy0]], [[1uyx\|1uyx]], [[1uyy\|1uyy]], [[1uyz\|1uyz]], [[1uz0\|1uz0]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1uy0\|1uy0]], [[1uyx\|1uyx]], [[1uyy\|1uyy]], [[1uyz\|1uyz]], [[1uz0\|1uz0]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1uxz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uxz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1uxz RCSB], [http://www.ebi.ac.uk/pdbsum/1uxz PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1uxz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uxz OCA], [http://pdbe.org/1uxz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1uxz RCSB], [http://www.ebi.ac.uk/pdbsum/1uxz PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 24:		Line 24:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1uxz" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Cellvibrio mixtus~~]]	+	[[Category: Acm 2601]]
	[[Category: Bolam, D]]		[[Category: Bolam, D]]
	[[Category: Czjzek, M]]		[[Category: Czjzek, M]]

OCA at 13:57, 6 January 2015

OCA — Tue, 06 Jan 2015 13:57:32 GMT

←Older revision		Revision as of 13:57, 6 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1uxz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Cellvibrio_mixtus Cellvibrio mixtus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UXZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UXZ FirstGlance]. <br>		<table><tr><td colspan='2'>[[1uxz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Cellvibrio_mixtus Cellvibrio mixtus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UXZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UXZ FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1uy0\|1uy0]], [[1uyx\|1uyx]], [[1uyy\|1uyy]], [[1uyz\|1uyz]], [[1uz0\|1uz0]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1uy0\|1uy0]], [[1uyx\|1uyx]], [[1uyy\|1uyy]], [[1uyz\|1uyz]], [[1uz0\|1uz0]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1uxz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uxz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1uxz RCSB], [http://www.ebi.ac.uk/pdbsum/1uxz PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1uxz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uxz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1uxz RCSB], [http://www.ebi.ac.uk/pdbsum/1uxz PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 29:		Line 29:
	</StructureSection>		</StructureSection>
	[[Category: Cellvibrio mixtus]]		[[Category: Cellvibrio mixtus]]
-	[[Category: Bolam, D.]]	+	[[Category: Bolam, D]]
-	[[Category: Czjzek, M.]]	+	[[Category: Czjzek, M]]
-	[[Category: Gilbert, H J.]]	+	[[Category: Gilbert, H J]]
-	[[Category: Henrissat, B.]]	+	[[Category: Henrissat, B]]
-	[[Category: Henshaw, J.]]	+	[[Category: Henshaw, J]]
-	[[Category: Pires, V M.R.]]	+	[[Category: Pires, V M.R]]
-	[[Category: Prates, J A.M.]]	+	[[Category: Prates, J A.M]]
	[[Category: 3-1]]		[[Category: 3-1]]
-	[[Category: ~~4 linked~~ glucan]]	+	[[Category: Linked glucan]]
	[[Category: Carbohydrate binding module]]		[[Category: Carbohydrate binding module]]
	[[Category: Cbm6]]		[[Category: Cbm6]]
	[[Category: Mixted beta1]]		[[Category: Mixted beta1]]

OCA at 22:02, 29 September 2014

OCA — Mon, 29 Sep 2014 22:02:38 GMT

←Older revision		Revision as of 22:02, 29 September 2014
Line 1:		Line 1:
-	[[~~Image:~~1uxz.~~png~~\|~~left~~\|200px]]	+	==CARBOHYDRATE BINDING MODULE (CBM6CM-2) FROM CELLVIBRIO MIXTUS LICHENASE 5A==
		+	<StructureSection load='1uxz' size='340' side='right' caption='[[1uxz]], [[Resolution\|resolution]] 1.40Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1uxz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Cellvibrio_mixtus Cellvibrio mixtus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UXZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UXZ FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1uy0\|1uy0]], [[1uyx\|1uyx]], [[1uyy\|1uyy]], [[1uyz\|1uyz]], [[1uz0\|1uz0]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1uxz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uxz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1uxz RCSB], [http://www.ebi.ac.uk/pdbsum/1uxz PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ux/1uxz_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Glycoside hydrolases that release fixed carbon from the plant cell wall are of considerable biological and industrial importance. These hydrolases contain non-catalytic carbohydrate binding modules (CBMs) that, by bringing the appended catalytic domain into intimate association with its insoluble substrate, greatly potentiate catalysis. Family 6 CBMs (CBM6) are highly unusual because they contain two distinct clefts (cleft A and cleft B) that potentially can function as binding sites. Henshaw et al. (Henshaw, J., Bolam, D. N., Pires, V. M. R., Czjzek, M., Henrissat, B., Ferreira, L. M. A., Fontes, C. M. G. A., and Gilbert, H. J. (2003) J. Biol. Chem. 279, 21552-21559) show that CmCBM6 contains two binding sites that display both similarities and differences in their ligand specificity. Here we report the crystal structure of CmCBM6 in complex with a variety of ligands that reveals the structural basis for the ligand specificity displayed by this protein. In cleft A the two faces of the terminal sugars of beta-linked oligosaccharides stack against Trp-92 and Tyr-33, whereas the rest of the binding cleft is blocked by Glu-20 and Thr-23, residues that are not present in CBM6 proteins that bind to the internal regions of polysaccharides in cleft A. Cleft B is solvent-exposed and, therefore, able to bind ligands because the loop, which occludes this region in other CBM6 proteins, is much shorter and flexible (lacks a conserved proline) in CmCBM6. Subsites 2 and 3 of cleft B accommodate cellobiose (Glc-beta-1,4-Glc), subsite 4 will bind only to a beta-1,3-linked glucose, whereas subsite 1 can interact with either a beta-1,3- or beta-1,4-linked glucose. These different specificities of the subsites explain how cleft B can accommodate beta-1,4-beta-1,3- or beta-1,3-beta-1,4-linked gluco-configured ligands.

-	~~{{STRUCTURE_1uxz\| PDB=1uxz \| SCENE= }}~~	+	The crystal structure of the family 6 carbohydrate binding module from Cellvibrio mixtus endoglucanase 5a in complex with oligosaccharides reveals two distinct binding sites with different ligand specificities.,Pires VM, Henshaw JL, Prates JA, Bolam DN, Ferreira LM, Fontes CM, Henrissat B, Planas A, Gilbert HJ, Czjzek M J Biol Chem. 2004 May 14;279(20):21560-8. Epub 2004 Mar 8. PMID:15010454<ref>PMID:15010454</ref>

-	~~===CARBOHYDRATE BINDING MODULE (CBM6CM-2) FROM CELLVIBRIO MIXTUS LICHENASE 5A===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_15010454}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[1uxz]] is~~ a ~~2 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Cellvibrio_mixtus Cellvibrio mixtus]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=1UXZ OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:015010454<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Cellvibrio mixtus]]		[[Category: Cellvibrio mixtus]]
	[[Category: Bolam, D.]]		[[Category: Bolam, D.]]

OCA: Protected "1uxz" [edit=sysop:move=sysop]

OCA — Sat, 05 Jan 2013 13:43:04 GMT

Protected "1uxz" [edit=sysop:move=sysop]

←Older revision

Revision as of 13:43, 5 January 2013

OCA at 13:43, 5 January 2013

OCA — Sat, 05 Jan 2013 13:43:02 GMT

←Older revision		Revision as of 13:43, 5 January 2013
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-	{{Seed}}
	[[Image:1uxz.png\|left\|200px]]		[[Image:1uxz.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1uxz", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_1uxz\| PDB=1uxz \| SCENE= }}		{{STRUCTURE_1uxz\| PDB=1uxz \| SCENE= }}

	===CARBOHYDRATE BINDING MODULE (CBM6CM-2) FROM CELLVIBRIO MIXTUS LICHENASE 5A===		===CARBOHYDRATE BINDING MODULE (CBM6CM-2) FROM CELLVIBRIO MIXTUS LICHENASE 5A===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_15010454}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 15010454 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_15010454}}		{{ABSTRACT_PUBMED_15010454}}

	==About this Structure==		==About this Structure==
-	~~1UXZ~~ is a 2 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Cellvibrio_mixtus Cellvibrio mixtus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UXZ OCA].	+	[[1uxz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Cellvibrio_mixtus Cellvibrio mixtus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UXZ OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~15010454~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:015010454</ref><references group="xtra"/>
	[[Category: Cellvibrio mixtus]]		[[Category: Cellvibrio mixtus]]
	[[Category: Bolam, D.]]		[[Category: Bolam, D.]]
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	[[Category: Cbm6]]		[[Category: Cbm6]]
	[[Category: Mixted beta1]]		[[Category: Mixted beta1]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 03:37:18 2009''

OCA at 01:37, 18 February 2009

OCA — Wed, 18 Feb 2009 01:37:21 GMT

←Older revision		Revision as of 01:37, 18 February 2009
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	==About this Structure==		==About this Structure==
-	1UXZ is a ~~[[Single protein]]~~ structure of ~~sequence~~ from [http://en.wikipedia.org/wiki/Cellvibrio_mixtus Cellvibrio mixtus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UXZ OCA].	+	1UXZ is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Cellvibrio_mixtus Cellvibrio mixtus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UXZ OCA].

	==Reference==		==Reference==
-	The crystal structure of the family 6 carbohydrate binding module from Cellvibrio mixtus endoglucanase 5a in complex with oligosaccharides reveals two distinct binding sites with different ligand specificities., Pires VM, Henshaw JL, Prates JA, Bolam DN, Ferreira LM, Fontes CM, Henrissat B, Planas A, Gilbert HJ, Czjzek M, J Biol Chem. 2004 May 14;279(20):21560-8. Epub 2004 Mar 8. PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/15010454 15010454]~~	+	<ref group="xtra">PMID:15010454</ref><references group="xtra"/>
	[[Category: Cellvibrio mixtus]]		[[Category: Cellvibrio mixtus]]
-	[[Category: Single protein]]
	[[Category: Bolam, D.]]		[[Category: Bolam, D.]]
	[[Category: Czjzek, M.]]		[[Category: Czjzek, M.]]
Line 39:		Line 38:
	[[Category: Mixted beta1]]		[[Category: Mixted beta1]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Tue Jul 29 09~~:51:~~53 2008~~''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 03:37:18 2009''