1vju - Revision history

OCA at 00:04, 28 December 2023

OCA — Thu, 28 Dec 2023 00:04:30 GMT

←Older revision		Revision as of 00:04, 28 December 2023
Line 3:		Line 3:
	<StructureSection load='1vju' size='340' side='right'caption='[[1vju]], [[Resolution\|resolution]] 1.40Å' scene=''>		<StructureSection load='1vju' size='340' side='right'caption='[[1vju]], [[Resolution\|resolution]] 1.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1vju]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Leima Leima~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VJU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VJU FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1vju]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Leishmania_major Leishmania major]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VJU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VJU FirstGlance]. <br>
-	</td></tr><tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"~~><scene name~~=~~'pdbligand=MSE:SELENOMETHIONINE'>MSE</scene~~></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.401Å</td></tr>
-	<tr id='~~activity~~'><td class="sblockLbl"><b>~~Activity~~:</b></td><td class="sblockDat"><~~span class~~='~~plainlinks~~'>~~[https://en.wikipedia.org/wiki/Coproporphyrinogen_oxidase Coproporphyrinogen oxidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.3.3 1.3.3.3]~~ </~~span~~></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vju FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vju OCA], [https://pdbe.org/1vju PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vju RCSB], [https://www.ebi.ac.uk/pdbsum/1vju PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vju ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vju FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vju OCA], [https://pdbe.org/1vju PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vju RCSB], [https://www.ebi.ac.uk/pdbsum/1vju PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vju ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/HEM6_LEIMA HEM6_LEIMA]] Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX (By similarity).[HAMAP-Rule:MF_00333]	+	[https://www.uniprot.org/uniprot/HEM6_LEIMA HEM6_LEIMA] Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX (By similarity).[HAMAP-Rule:MF_00333]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 22:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Coproporphyrinogen oxidase]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Leima]]~~	+	[[Category: Leishmania major]]
-	~~[[Category: Structural genomic]]~~	+
-	~~[[Category: Oxidoreductase]]~~	+
-	~~[[Category: PSI, Protein structure initiative]]~~	+
-	~~[[Category: Sgpp~~]]	+

OCA at 09:44, 29 September 2021

OCA — Wed, 29 Sep 2021 09:44:04 GMT

←Older revision		Revision as of 09:44, 29 September 2021
Line 3:		Line 3:
	<StructureSection load='1vju' size='340' side='right'caption='[[1vju]], [[Resolution\|resolution]] 1.40Å' scene=''>		<StructureSection load='1vju' size='340' side='right'caption='[[1vju]], [[Resolution\|resolution]] 1.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1vju]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Leima Leima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VJU OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1VJU FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1vju]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Leima Leima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VJU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VJU FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Coproporphyrinogen_oxidase Coproporphyrinogen oxidase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.3.3 1.3.3.3] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Coproporphyrinogen_oxidase Coproporphyrinogen oxidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.3.3 1.3.3.3] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1vju FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vju OCA], [~~http~~://pdbe.org/1vju PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1vju RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1vju PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1vju ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vju FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vju OCA], [https://pdbe.org/1vju PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vju RCSB], [https://www.ebi.ac.uk/pdbsum/1vju PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vju ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/HEM6_LEIMA HEM6_LEIMA]] Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX (By similarity).[HAMAP-Rule:MF_00333]	+	[[https://www.uniprot.org/uniprot/HEM6_LEIMA HEM6_LEIMA]] Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX (By similarity).[HAMAP-Rule:MF_00333]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 11:32, 4 December 2019

OCA — Wed, 04 Dec 2019 11:32:45 GMT

←Older revision		Revision as of 11:32, 4 December 2019
Line 1:		Line 1:

	==Coproporphyrinogen III oxidase from Leishmania major==		==Coproporphyrinogen III oxidase from Leishmania major==
-	<StructureSection load='1vju' size='340' side='right' caption='[[1vju]], [[Resolution\|resolution]] 1.40Å' scene=''>	+	<StructureSection load='1vju' size='340' side='right'caption='[[1vju]], [[Resolution\|resolution]] 1.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1vju]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Leima Leima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VJU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VJU FirstGlance]. <br>		<table><tr><td colspan='2'>[[1vju]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Leima Leima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VJU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VJU FirstGlance]. <br>
Line 23:		Line 23:
	</StructureSection>		</StructureSection>
	[[Category: Coproporphyrinogen oxidase]]		[[Category: Coproporphyrinogen oxidase]]
		+	[[Category: Large Structures]]
	[[Category: Leima]]		[[Category: Leima]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]

OCA at 06:32, 31 January 2018

OCA — Wed, 31 Jan 2018 06:32:59 GMT

←Older revision		Revision as of 06:32, 31 January 2018
Line 1:		Line 1:
		+
	==Coproporphyrinogen III oxidase from Leishmania major==		==Coproporphyrinogen III oxidase from Leishmania major==
	<StructureSection load='1vju' size='340' side='right' caption='[[1vju]], [[Resolution\|resolution]] 1.40Å' scene=''>		<StructureSection load='1vju' size='340' side='right' caption='[[1vju]], [[Resolution\|resolution]] 1.40Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Coproporphyrinogen_oxidase Coproporphyrinogen oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.3.3 1.3.3.3] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Coproporphyrinogen_oxidase Coproporphyrinogen oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.3.3 1.3.3.3] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vju FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vju OCA], [http://pdbe.org/1vju PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1vju RCSB], [http://www.ebi.ac.uk/pdbsum/1vju PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vju FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vju OCA], [http://pdbe.org/1vju PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1vju RCSB], [http://www.ebi.ac.uk/pdbsum/1vju PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1vju ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 13:		Line 14:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vj/1vju_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vj/1vju_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 11:16, 7 February 2016

OCA — Sun, 07 Feb 2016 11:16:01 GMT

←Older revision		Revision as of 11:16, 7 February 2016
Line 17:		Line 17:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vju ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 00:58, 10 September 2015

OCA — Thu, 10 Sep 2015 00:58:05 GMT

←Older revision		Revision as of 00:58, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='1vju' size='340' side='right' caption='[[1vju]], [[Resolution\|resolution]] 1.40Å' scene=''>		<StructureSection load='1vju' size='340' side='right' caption='[[1vju]], [[Resolution\|resolution]] 1.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1vju]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Leishmania_major Leishmania major~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VJU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VJU FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1vju]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Leima Leima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VJU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VJU FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Coproporphyrinogen_oxidase Coproporphyrinogen oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.3.3 1.3.3.3] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Coproporphyrinogen_oxidase Coproporphyrinogen oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.3.3 1.3.3.3] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vju FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vju OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1vju RCSB], [http://www.ebi.ac.uk/pdbsum/1vju PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vju FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vju OCA], [http://pdbe.org/1vju PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1vju RCSB], [http://www.ebi.ac.uk/pdbsum/1vju PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 22:		Line 22:
	</StructureSection>		</StructureSection>
	[[Category: Coproporphyrinogen oxidase]]		[[Category: Coproporphyrinogen oxidase]]
-	[[Category: ~~Leishmania major~~]]	+	[[Category: Leima]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]
	[[Category: PSI, Protein structure initiative]]		[[Category: PSI, Protein structure initiative]]
	[[Category: Sgpp]]		[[Category: Sgpp]]

OCA at 14:40, 24 December 2014

OCA — Wed, 24 Dec 2014 14:40:49 GMT

←Older revision		Revision as of 14:40, 24 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1vju]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Leishmania_major Leishmania major]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VJU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VJU FirstGlance]. <br>		<table><tr><td colspan='2'>[[1vju]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Leishmania_major Leishmania major]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VJU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VJU FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Coproporphyrinogen_oxidase Coproporphyrinogen oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.3.3 1.3.3.3] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Coproporphyrinogen_oxidase Coproporphyrinogen oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.3.3 1.3.3.3] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vju FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vju OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1vju RCSB], [http://www.ebi.ac.uk/pdbsum/1vju PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vju FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vju OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1vju RCSB], [http://www.ebi.ac.uk/pdbsum/1vju PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/HEM6_LEIMA HEM6_LEIMA]] Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX (By similarity).[HAMAP-Rule:MF_00333]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 21:		Line 23:
	[[Category: Coproporphyrinogen oxidase]]		[[Category: Coproporphyrinogen oxidase]]
	[[Category: Leishmania major]]		[[Category: Leishmania major]]
-	[[Category: ~~SGPP,~~ Structural ~~Genomics of Pathogenic Protozoa Consortium.~~]]	+	[[Category: Structural genomic]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]
-	[[Category: Protein structure initiative]]	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category: Psi~~]]	+
	[[Category: Sgpp]]		[[Category: Sgpp]]
-	[[Category: Structural genomic]]
-	[[Category: Structural genomics of pathogenic protozoa consortium]]

OCA at 10:24, 3 October 2014

OCA — Fri, 03 Oct 2014 10:24:50 GMT

←Older revision		Revision as of 10:24, 3 October 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_1vju\| PDB=1vju \| SCENE= }}~~	+	==Coproporphyrinogen III oxidase from Leishmania major==
-	===Coproporphyrinogen III oxidase from Leishmania major===	+	<StructureSection load='1vju' size='340' side='right' caption='[[1vju]], [[Resolution\|resolution]] 1.40Å' scene=''>
-		+	== Structural highlights ==
-	==~~Function~~==	+	<table><tr><td colspan='2'>[[1vju]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Leishmania_major Leishmania major]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VJU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VJU FirstGlance]. <br>
-	[[~~http://www.uniprot.org/uniprot/HEM6_LEIMA HEM6_LEIMA~~]] Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX (By similarity).[~~HAMAP-Rule:MF_00333~~]	+	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-		+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Coproporphyrinogen_oxidase Coproporphyrinogen oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.3.3 1.3.3.3] </span></td></tr>
-	==~~About this Structure~~==	+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vju FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vju OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1vju RCSB], [http://www.ebi.ac.uk/pdbsum/1vju PDBsum]</span></td></tr>
-	[[1vju]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Leishmania_major Leishmania major]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VJU OCA].	+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vj/1vju_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Coproporphyrinogen oxidase]]		[[Category: Coproporphyrinogen oxidase]]
	[[Category: Leishmania major]]		[[Category: Leishmania major]]

OCA at 08:17, 23 April 2014

OCA — Wed, 23 Apr 2014 08:17:21 GMT

←Older revision		Revision as of 08:17, 23 April 2014
Line 1:		Line 1:
-	[[Image:1vju.png\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_1vju", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_1vju\| PDB=1vju \| SCENE= }}		{{STRUCTURE_1vju\| PDB=1vju \| SCENE= }}
-
	===Coproporphyrinogen III oxidase from Leishmania major===		===Coproporphyrinogen III oxidase from Leishmania major===

		+	==Function==
		+	[[http://www.uniprot.org/uniprot/HEM6_LEIMA HEM6_LEIMA]] Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX (By similarity).[HAMAP-Rule:MF_00333]

	==About this Structure==		==About this Structure==

OCA: Protected "1vju" [edit=sysop:move=sysop]

OCA — Sat, 02 Jun 2012 09:00:14 GMT

Protected "1vju" [edit=sysop:move=sysop]

←Older revision

Revision as of 09:00, 2 June 2012