1wln - Revision history

OCA at 13:44, 9 May 2024

OCA — Thu, 09 May 2024 13:44:32 GMT

←Older revision		Revision as of 13:44, 9 May 2024
Line 1:		Line 1:

	==Solution structure of the FHA domain of mouse Afadin 6==		==Solution structure of the FHA domain of mouse Afadin 6==
-	<StructureSection load='1wln' size='340' side='right'caption='[[1wln~~]], [[NMR_Ensembles_of_Models \| 20 NMR models~~]]' scene=''>	+	<StructureSection load='1wln' size='340' side='right'caption='[[1wln]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1wln]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Lk3_transgenic_mice Lk3 transgenic mice~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WLN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WLN FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1wln]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WLN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WLN FirstGlance]. <br>
-	</td></tr><tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>RIKEN cDNA library 4932441D06 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~10090 LK3 transgenic mice])~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wln FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wln OCA], [https://pdbe.org/1wln PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wln RCSB], [https://www.ebi.ac.uk/pdbsum/1wln PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wln ProSAT], [https://www.topsan.org/Proteins/RSGI/1wln TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wln FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wln OCA], [https://pdbe.org/1wln PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wln RCSB], [https://www.ebi.ac.uk/pdbsum/1wln PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wln ProSAT], [https://www.topsan.org/Proteins/RSGI/1wln TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/AFAD_MOUSE AFAD_MOUSE]] Belongs to an adhesion system, probably together with the E-cadherin-catenin system, which plays a role in the organization of homotypic, interneuronal and heterotypic cell-cell adherens junctions (AJs). Nectin- and actin-filament-binding protein that connects nectin to the actin cytoskeleton. May play a key role in the organization of epithelial structures of the embryonic ectoderm.<ref>PMID:10477764</ref>	+	[https://www.uniprot.org/uniprot/AFAD_MOUSE AFAD_MOUSE] Belongs to an adhesion system, probably together with the E-cadherin-catenin system, which plays a role in the organization of homotypic, interneuronal and heterotypic cell-cell adherens junctions (AJs). Nectin- and actin-filament-binding protein that connects nectin to the actin cytoskeleton. May play a key role in the organization of epithelial structures of the embryonic ectoderm.<ref>PMID:10477764</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 24:		Line 24:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Lk3 transgenic mice~~]]	+	[[Category: Mus musculus]]
-	[[Category: Guentert, P]]	+	[[Category: Guentert P]]
-	[[Category: Hayashi, F]]	+	[[Category: Hayashi F]]
-	[[Category: Hirata, Y]]	+	[[Category: Hirata Y]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Yokoyama S]]
-	[[Category: Yokoyama~~, S]]~~	+
-	~~[[Category: Af-6]]~~	+
-	~~[[Category: Beta sandwich]]~~	+
-	~~[[Category: Cell adhesion]]~~	+
-	~~[[Category: Fha domain]]~~	+
-	~~[[Category: National project on protein structural and functional analyse]]~~	+
-	~~[[Category: Nppsfa]]~~	+
-	~~[[Category: Rsgi]]~~	+
-	~~[[Category:~~ S~~-afadin~~]]	+

OCA at 06:58, 2 March 2022

OCA — Wed, 02 Mar 2022 06:58:21 GMT

←Older revision		Revision as of 06:58, 2 March 2022
Line 3:		Line 3:
	<StructureSection load='1wln' size='340' side='right'caption='[[1wln]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='1wln' size='340' side='right'caption='[[1wln]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1wln]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WLN OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=1WLN FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1wln]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WLN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WLN FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">RIKEN cDNA library 4932441D06 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">RIKEN cDNA library 4932441D06 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=1wln FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wln OCA], [~~http~~://pdbe.org/1wln PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1wln RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1wln PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1wln ProSAT], [~~http~~://www.topsan.org/Proteins/RSGI/1wln TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wln FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wln OCA], [https://pdbe.org/1wln PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wln RCSB], [https://www.ebi.ac.uk/pdbsum/1wln PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wln ProSAT], [https://www.topsan.org/Proteins/RSGI/1wln TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/AFAD_MOUSE AFAD_MOUSE]] Belongs to an adhesion system, probably together with the E-cadherin-catenin system, which plays a role in the organization of homotypic, interneuronal and heterotypic cell-cell adherens junctions (AJs). Nectin- and actin-filament-binding protein that connects nectin to the actin cytoskeleton. May play a key role in the organization of epithelial structures of the embryonic ectoderm.<ref>PMID:10477764</ref>	+	[[https://www.uniprot.org/uniprot/AFAD_MOUSE AFAD_MOUSE]] Belongs to an adhesion system, probably together with the E-cadherin-catenin system, which plays a role in the organization of homotypic, interneuronal and heterotypic cell-cell adherens junctions (AJs). Nectin- and actin-filament-binding protein that connects nectin to the actin cytoskeleton. May play a key role in the organization of epithelial structures of the embryonic ectoderm.<ref>PMID:10477764</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 09:24, 6 January 2021

OCA — Wed, 06 Jan 2021 09:24:03 GMT

←Older revision		Revision as of 09:24, 6 January 2021
Line 1:		Line 1:

	==Solution structure of the FHA domain of mouse Afadin 6==		==Solution structure of the FHA domain of mouse Afadin 6==
-	<StructureSection load='1wln' size='340' side='right' caption='[[1wln]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>	+	<StructureSection load='1wln' size='340' side='right'caption='[[1wln]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1wln]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WLN OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1WLN FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1wln]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WLN OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1WLN FirstGlance]. <br>
	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">RIKEN cDNA library 4932441D06 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>		</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">RIKEN cDNA library 4932441D06 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1wln FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wln OCA], [http://pdbe.org/1wln PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1wln RCSB], [http://www.ebi.ac.uk/pdbsum/1wln PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1wln ProSAT], [http://www.topsan.org/Proteins/RSGI/1wln TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1wln FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wln OCA], [http://pdbe.org/1wln PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1wln RCSB], [http://www.ebi.ac.uk/pdbsum/1wln PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1wln ProSAT], [http://www.topsan.org/Proteins/RSGI/1wln TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 23:		Line 23:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Lk3 transgenic mice]]		[[Category: Lk3 transgenic mice]]
	[[Category: Guentert, P]]		[[Category: Guentert, P]]

OCA at 16:34, 11 April 2018

OCA — Wed, 11 Apr 2018 16:34:15 GMT

←Older revision		Revision as of 16:34, 11 April 2018
Line 1:		Line 1:
		+
	==Solution structure of the FHA domain of mouse Afadin 6==		==Solution structure of the FHA domain of mouse Afadin 6==
	<StructureSection load='1wln' size='340' side='right' caption='[[1wln]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='1wln' size='340' side='right' caption='[[1wln]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[1wln]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WLN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WLN FirstGlance]. <br>		<table><tr><td colspan='2'>[[1wln]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WLN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WLN FirstGlance]. <br>
	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">RIKEN cDNA library 4932441D06 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>		</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">RIKEN cDNA library 4932441D06 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wln FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wln OCA], [http://pdbe.org/1wln PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1wln RCSB], [http://www.ebi.ac.uk/pdbsum/1wln PDBsum], [http://www.topsan.org/Proteins/RSGI/1wln TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wln FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wln OCA], [http://pdbe.org/1wln PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1wln RCSB], [http://www.ebi.ac.uk/pdbsum/1wln PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1wln ProSAT], [http://www.topsan.org/Proteins/RSGI/1wln TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 12:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wl/1wln_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wl/1wln_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wln ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	== References ==		== References ==

OCA at 11:37, 11 September 2015

OCA — Fri, 11 Sep 2015 11:37:50 GMT

←Older revision		Revision as of 11:37, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='1wln' size='340' side='right' caption='[[1wln]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='1wln' size='340' side='right' caption='[[1wln]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1wln]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Mus_musculus Mus musculus~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WLN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WLN FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1wln]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WLN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WLN FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">RIKEN cDNA library 4932441D06 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 ~~Mus musculus~~])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">RIKEN cDNA library 4932441D06 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wln FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wln OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1wln RCSB], [http://www.ebi.ac.uk/pdbsum/1wln PDBsum], [http://www.topsan.org/Proteins/RSGI/1wln TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wln FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wln OCA], [http://pdbe.org/1wln PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1wln RCSB], [http://www.ebi.ac.uk/pdbsum/1wln PDBsum], [http://www.topsan.org/Proteins/RSGI/1wln TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 22:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Mus musculus~~]]	+	[[Category: Lk3 transgenic mice]]
	[[Category: Guentert, P]]		[[Category: Guentert, P]]
	[[Category: Hayashi, F]]		[[Category: Hayashi, F]]

OCA at 15:56, 25 December 2014

OCA — Thu, 25 Dec 2014 15:56:43 GMT

←Older revision		Revision as of 15:56, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1wln]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WLN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WLN FirstGlance]. <br>		<table><tr><td colspan='2'>[[1wln]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WLN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WLN FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">RIKEN cDNA library 4932441D06 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 Mus musculus])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">RIKEN cDNA library 4932441D06 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 Mus musculus])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wln FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wln OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1wln RCSB], [http://www.ebi.ac.uk/pdbsum/1wln PDBsum], [http://www.topsan.org/Proteins/RSGI/1wln TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wln FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wln OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1wln RCSB], [http://www.ebi.ac.uk/pdbsum/1wln PDBsum], [http://www.topsan.org/Proteins/RSGI/1wln TOPSAN]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/AFAD_MOUSE AFAD_MOUSE]] Belongs to an adhesion system, probably together with the E-cadherin-catenin system, which plays a role in the organization of homotypic, interneuronal and heterotypic cell-cell adherens junctions (AJs). Nectin- and actin-filament-binding protein that connects nectin to the actin cytoskeleton. May play a key role in the organization of epithelial structures of the embryonic ectoderm.<ref>PMID:10477764</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 16:		Line 18:
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
-	[[Category: Guentert, P.]]	+	[[Category: Guentert, P]]
-	[[Category: Hayashi, F.]]	+	[[Category: Hayashi, F]]
-	[[Category: Hirata, Y.]]	+	[[Category: Hirata, Y]]
-	[[Category: ~~RSGI, RIKEN~~ Structural ~~Genomics/Proteomics Initiative.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Yokoyama, S.]]	+	[[Category: Yokoyama, S]]
	[[Category: Af-6]]		[[Category: Af-6]]
	[[Category: Beta sandwich]]		[[Category: Beta sandwich]]
Line 30:		Line 34:
	[[Category: National project on protein structural and functional analyse]]		[[Category: National project on protein structural and functional analyse]]
	[[Category: Nppsfa]]		[[Category: Nppsfa]]
-	[[Category: Riken structural genomics/proteomics initiative]]
	[[Category: Rsgi]]		[[Category: Rsgi]]
	[[Category: S-afadin]]		[[Category: S-afadin]]
-	[[Category: Structural genomic]]

OCA at 19:12, 29 September 2014

OCA — Mon, 29 Sep 2014 19:12:32 GMT

←Older revision		Revision as of 19:12, 29 September 2014
Line 1:		Line 1:
-	~~[[Image:1wln.png\|left\|200px]]~~	+	==Solution structure of the FHA domain of mouse Afadin 6==
-		+	<StructureSection load='1wln' size='340' side='right' caption='[[1wln]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
-	~~{{STRUCTURE_1wln\| PDB=1wln \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[1wln]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WLN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WLN FirstGlance]. <br>
-	===Solution structure of the FHA domain of mouse Afadin 6===	+	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">RIKEN cDNA library 4932441D06 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 Mus musculus])</td></tr>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wln FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wln OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1wln RCSB], [http://www.ebi.ac.uk/pdbsum/1wln PDBsum], [http://www.topsan.org/Proteins/RSGI/1wln TOPSAN]</span></td></tr>
-		+	<table>
-	==~~About this Structure~~==	+	== Evolutionary Conservation ==
-	[[1wln]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WLN OCA].	+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wl/1wln_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
	[[Category: Guentert, P.]]		[[Category: Guentert, P.]]

OCA: Protected "1wln" [edit=sysop:move=sysop]

OCA — Sat, 05 Jan 2013 12:07:28 GMT

Protected "1wln" [edit=sysop:move=sysop]

←Older revision

Revision as of 12:07, 5 January 2013

OCA at 12:07, 5 January 2013

OCA — Sat, 05 Jan 2013 12:07:25 GMT

←Older revision		Revision as of 12:07, 5 January 2013
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-	{{Seed}}
	[[Image:1wln.png\|left\|200px]]		[[Image:1wln.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1wln", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_1wln\| PDB=1wln \| SCENE= }}		{{STRUCTURE_1wln\| PDB=1wln \| SCENE= }}

Line 14:		Line 7:

	==About this Structure==		==About this Structure==
-	~~1WLN~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WLN OCA].	+	[[1wln]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WLN OCA].
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
	[[Category: Guentert, P.]]		[[Category: Guentert, P.]]
Line 23:		Line 16:
	[[Category: Af-6]]		[[Category: Af-6]]
	[[Category: Beta sandwich]]		[[Category: Beta sandwich]]
		+	[[Category: Cell adhesion]]
	[[Category: Fha domain]]		[[Category: Fha domain]]
	[[Category: National project on protein structural and functional analyse]]		[[Category: National project on protein structural and functional analyse]]
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	[[Category: S-afadin]]		[[Category: S-afadin]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 11:41:01 2008''

OCA at 09:41, 16 November 2008

OCA — Sun, 16 Nov 2008 09:41:03 GMT

←Older revision		Revision as of 09:41, 16 November 2008
Line 14:		Line 14:

	==About this Structure==		==About this Structure==
-	1WLN is a ~~[[Single protein]]~~ structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WLN OCA].	+	1WLN is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WLN OCA].
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
-	[[Category: Single protein]]
	[[Category: Guentert, P.]]		[[Category: Guentert, P.]]
	[[Category: Hayashi, F.]]		[[Category: Hayashi, F.]]
Line 32:		Line 31:
	[[Category: Structural genomic]]		[[Category: Structural genomic]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun ~~Sep 28 17~~:54:55 2008''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 11:41:01 2008''