1wqy - Revision history

OCA at 11:25, 2 August 2023

OCA — Wed, 02 Aug 2023 11:25:38 GMT

←Older revision		Revision as of 11:25, 2 August 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1wqy]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WQY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WQY FirstGlance]. <br>		<table><tr><td colspan='2'>[[1wqy]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WQY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WQY FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=DOD:DEUTERATED+WATER'>DOD</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max-height: 3em;~~'>~~[[167d\|167d]], [[1wqz\|1wqz]]~~</~~div~~></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DOD:DEUTERATED+WATER'>DOD</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wqy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wqy OCA], [https://pdbe.org/1wqy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wqy RCSB], [https://www.ebi.ac.uk/pdbsum/1wqy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wqy ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wqy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wqy OCA], [https://pdbe.org/1wqy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wqy RCSB], [https://www.ebi.ac.uk/pdbsum/1wqy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wqy ProSAT]</span></td></tr>
	</table>		</table>
Line 22:		Line 22:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Arai, S]]	+	[[Category: Arai S]]
-	[[Category: Chatake, T]]	+	[[Category: Chatake T]]
-	[[Category: Fujimoto, Z]]	+	[[Category: Fujimoto Z]]
-	[[Category: Kurihara, K]]	+	[[Category: Kurihara K]]
-	[[Category: Mizuno, H]]	+	[[Category: Mizuno H]]
-	[[Category: Niimura, N]]	+	[[Category: Niimura N]]
-	[[Category: Ohhara, T]]	+	[[Category: Ohhara T]]
-	[[Category: Suzuki, N]]	+	[[Category: Suzuki N]]
-	[[Category: Tanaka, I]]	+	[[Category: Tanaka I]]
-	~~[[Category: B-dna]]~~	+
-	~~[[Category: Dna]]~~	+
-	~~[[Category: Hydration]]~~	+
-	~~[[Category: Hydrogen~~]]	+

OCA at 16:25, 27 October 2021

OCA — Wed, 27 Oct 2021 16:25:08 GMT

←Older revision		Revision as of 16:25, 27 October 2021
Line 3:		Line 3:
	<StructureSection load='1wqy' size='340' side='right'caption='[[1wqy]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='1wqy' size='340' side='right'caption='[[1wqy]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1wqy]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WQY OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1WQY FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1wqy]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WQY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WQY FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DOD:DEUTERATED+WATER'>DOD</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DOD:DEUTERATED+WATER'>DOD</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[167d\|167d]], [[1wqz\|1wqz]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[167d\|167d]], [[1wqz\|1wqz]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1wqy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wqy OCA], [~~http~~://pdbe.org/1wqy PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1wqy RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1wqy PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1wqy ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wqy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wqy OCA], [https://pdbe.org/1wqy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wqy RCSB], [https://www.ebi.ac.uk/pdbsum/1wqy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wqy ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 17:50, 22 January 2020

OCA — Wed, 22 Jan 2020 17:50:45 GMT

←Older revision		Revision as of 17:50, 22 January 2020
Line 1:		Line 1:

	==X-RAY structural analysis of B-DNA decamer D(CCATTAATGG)2 crystal grown in D2O solution==		==X-RAY structural analysis of B-DNA decamer D(CCATTAATGG)2 crystal grown in D2O solution==
-	<StructureSection load='1wqy' size='340' side='right' caption='[[1wqy]], [[Resolution\|resolution]] 2.00Å' scene=''>	+	<StructureSection load='1wqy' size='340' side='right'caption='[[1wqy]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1wqy]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WQY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WQY FirstGlance]. <br>		<table><tr><td colspan='2'>[[1wqy]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WQY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WQY FirstGlance]. <br>
Line 21:		Line 21:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Arai, S]]		[[Category: Arai, S]]
	[[Category: Chatake, T]]		[[Category: Chatake, T]]

OCA at 16:33, 11 April 2018

OCA — Wed, 11 Apr 2018 16:33:37 GMT

←Older revision		Revision as of 16:33, 11 April 2018
Line 1:		Line 1:
		+
	==X-RAY structural analysis of B-DNA decamer D(CCATTAATGG)2 crystal grown in D2O solution==		==X-RAY structural analysis of B-DNA decamer D(CCATTAATGG)2 crystal grown in D2O solution==
	<StructureSection load='1wqy' size='340' side='right' caption='[[1wqy]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='1wqy' size='340' side='right' caption='[[1wqy]], [[Resolution\|resolution]] 2.00Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DOD:DEUTERATED+WATER'>DOD</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DOD:DEUTERATED+WATER'>DOD</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[167d\|167d]], [[1wqz\|1wqz]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[167d\|167d]], [[1wqz\|1wqz]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wqy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wqy OCA], [http://pdbe.org/1wqy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1wqy RCSB], [http://www.ebi.ac.uk/pdbsum/1wqy PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wqy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wqy OCA], [http://pdbe.org/1wqy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1wqy RCSB], [http://www.ebi.ac.uk/pdbsum/1wqy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1wqy ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 23:19, 11 September 2015

OCA — Fri, 11 Sep 2015 23:19:46 GMT

←Older revision		Revision as of 23:19, 11 September 2015
Line 5:		Line 5:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DOD:DEUTERATED+WATER'>DOD</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DOD:DEUTERATED+WATER'>DOD</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[167d\|167d]], [[1wqz\|1wqz]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[167d\|167d]], [[1wqz\|1wqz]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wqy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wqy OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1wqy RCSB], [http://www.ebi.ac.uk/pdbsum/1wqy PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wqy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wqy OCA], [http://pdbe.org/1wqy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1wqy RCSB], [http://www.ebi.ac.uk/pdbsum/1wqy PDBsum]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 15:		Line 15:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1wqy" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 12:37, 18 December 2014

OCA — Thu, 18 Dec 2014 12:37:27 GMT

←Older revision		Revision as of 12:37, 18 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_1wqy\| PDB=1wqy \| SCENE= }}~~	+	==X-RAY structural analysis of B-DNA decamer D(CCATTAATGG)2 crystal grown in D2O solution==
-	===X-RAY structural analysis of B-DNA decamer D(CCATTAATGG)2 crystal grown in D2O solution===	+	<StructureSection load='1wqy' size='340' side='right' caption='[[1wqy]], [[Resolution\|resolution]] 2.00Å' scene=''>
-	~~{{ABSTRACT_PUBMED_15914673}}~~	+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1wqy]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WQY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WQY FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DOD:DEUTERATED+WATER'>DOD</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[167d\|167d]], [[1wqz\|1wqz]]</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wqy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wqy OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1wqy RCSB], [http://www.ebi.ac.uk/pdbsum/1wqy PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	It has long been suspected that the structure and function of a DNA duplex can be strongly dependent on its degree of hydration. By neutron diffraction experiments, we have succeeded in determining most of the hydrogen (H) and deuterium (D) atomic positions in the decameric d(CCATTAATGG)2 duplex. Moreover, the D positions in 27 D2O molecules have been determined. In particular, the complex water network in the minor groove has been observed in detail. By a combined structural analysis using 2.0 A resolution X-ray and 3.0 A resolution neutron data, it is clear that the spine of hydration is built up, not only by a simple hexagonal hydration pattern (as reported in earlier X-ray studies), but also by many other water bridges hydrogen-bonded to the DNA strands. The complexity of the hydration pattern in the minor groove is derived from an extraordinary variety of orientations displayed by the water molecules.

-	~~==About this Structure==~~	+	Complicated water orientations in the minor groove of the B-DNA decamer d(CCATTAATGG)2 observed by neutron diffraction measurements.,Arai S, Chatake T, Ohhara T, Kurihara K, Tanaka I, Suzuki N, Fujimoto Z, Mizuno H, Niimura N Nucleic Acids Res. 2005 May 24;33(9):3017-24. Print 2005. PMID:15914673<ref>PMID:15914673</ref>
-	~~[[1wqy]] is a~~ 2 ~~chain structure~~. ~~Full crystallographic information is available from [http~~:~~//oca~~.~~weizmann~~.~~ac.il~~/~~oca-bin/ocashort?id=1WQY OCA].~~	+

-	==~~Reference~~==	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~<ref group="xtra">PMID:015914673</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	</div>
-	[[Category: Arai, S.]]	+	== References ==
-	[[Category: Chatake, T.]]	+	<references/>
-	[[Category: Fujimoto, Z.]]	+	__TOC__
-	[[Category: Kurihara, K.]]	+	</StructureSection>
-	[[Category: Mizuno, H.]]	+	[[Category: Arai, S]]
-	[[Category: Niimura, N.]]	+	[[Category: Chatake, T]]
-	[[Category: Ohhara, T.]]	+	[[Category: Fujimoto, Z]]
-	[[Category: Suzuki, N.]]	+	[[Category: Kurihara, K]]
-	[[Category: Tanaka, I.]]	+	[[Category: Mizuno, H]]
		+	[[Category: Niimura, N]]
		+	[[Category: Ohhara, T]]
		+	[[Category: Suzuki, N]]
		+	[[Category: Tanaka, I]]
	[[Category: B-dna]]		[[Category: B-dna]]
	[[Category: Dna]]		[[Category: Dna]]
	[[Category: Hydration]]		[[Category: Hydration]]
	[[Category: Hydrogen]]		[[Category: Hydrogen]]

OCA at 05:27, 28 August 2013

OCA — Wed, 28 Aug 2013 05:27:50 GMT

←Older revision		Revision as of 05:27, 28 August 2013
Line 1:		Line 1:
-	[[Image:1wqy.png\|left\|200px]]
-
	{{STRUCTURE_1wqy\| PDB=1wqy \| SCENE= }}		{{STRUCTURE_1wqy\| PDB=1wqy \| SCENE= }}
-
	===X-RAY structural analysis of B-DNA decamer D(CCATTAATGG)2 crystal grown in D2O solution===		===X-RAY structural analysis of B-DNA decamer D(CCATTAATGG)2 crystal grown in D2O solution===
-
	{{ABSTRACT_PUBMED_15914673}}		{{ABSTRACT_PUBMED_15914673}}

Line 11:		Line 7:

	==Reference==		==Reference==
-	<ref group="xtra">PMID:015914673</ref><references group="xtra"/>	+	<ref group="xtra">PMID:015914673</ref><references group="xtra"/><references/>
	[[Category: Arai, S.]]		[[Category: Arai, S.]]
	[[Category: Chatake, T.]]		[[Category: Chatake, T.]]

OCA: Protected "1wqy" [edit=sysop:move=sysop]

OCA — Sat, 05 Jan 2013 13:40:42 GMT

Protected "1wqy" [edit=sysop:move=sysop]

←Older revision

Revision as of 13:40, 5 January 2013

OCA at 13:40, 5 January 2013

OCA — Sat, 05 Jan 2013 13:40:38 GMT

←Older revision		Revision as of 13:40, 5 January 2013
Line 1:		Line 1:
-	{{Seed}}
	[[Image:1wqy.png\|left\|200px]]		[[Image:1wqy.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1wqy", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_1wqy\| PDB=1wqy \| SCENE= }}		{{STRUCTURE_1wqy\| PDB=1wqy \| SCENE= }}

	===X-RAY structural analysis of B-DNA decamer D(CCATTAATGG)2 crystal grown in D2O solution===		===X-RAY structural analysis of B-DNA decamer D(CCATTAATGG)2 crystal grown in D2O solution===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_15914673}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 15914673 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_15914673}}		{{ABSTRACT_PUBMED_15914673}}

	==About this Structure==		==About this Structure==
-	Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WQY OCA].	+	[[1wqy]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WQY OCA].

	==Reference==		==Reference==
-	Complicated water orientations in the minor groove of the B-DNA decamer d(CCATTAATGG)2 observed by neutron diffraction measurements., Arai S, Chatake T, Ohhara T, Kurihara K, Tanaka I, Suzuki N, Fujimoto Z, Mizuno H, Niimura N, Nucleic Acids Res. 2005 May 24;33(9):3017-24. Print 2005. PMID:~~[http://www.ncbi.nlm.nih.gov~~/~~pubmed~~/~~15914673 15914673]~~	+	<ref group="xtra">PMID:015914673</ref><references group="xtra"/>
	[[Category: Arai, S.]]		[[Category: Arai, S.]]
	[[Category: Chatake, T.]]		[[Category: Chatake, T.]]
Line 34:		Line 22:
	[[Category: Tanaka, I.]]		[[Category: Tanaka, I.]]
	[[Category: B-dna]]		[[Category: B-dna]]
		+	[[Category: Dna]]
	[[Category: Hydration]]		[[Category: Hydration]]
	[[Category: Hydrogen]]		[[Category: Hydrogen]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 13:26:48 2008''

OCA at 10:26, 29 July 2008

OCA — Tue, 29 Jul 2008 10:26:53 GMT

←Older revision		Revision as of 10:26, 29 July 2008
Line 1:		Line 1:
-	[[Image:1wqy.~~gif~~\|left\|200px]]	+	{{Seed}}
		+	[[Image:1wqy.png\|left\|200px]]

	<!--		<!--
Line 9:		Line 10:
	{{STRUCTURE_1wqy\| PDB=1wqy \| SCENE= }}		{{STRUCTURE_1wqy\| PDB=1wqy \| SCENE= }}

-	~~'''~~X-RAY structural analysis of B-DNA decamer D(CCATTAATGG)2 crystal grown in D2O solution~~'''~~	+	===X-RAY structural analysis of B-DNA decamer D(CCATTAATGG)2 crystal grown in D2O solution===


-	~~==Overview==~~	+	<!--
-	~~It has long been suspected that the structure and function of a DNA duplex can be strongly dependent on its degree of hydration. By neutron diffraction experiments~~, ~~we have succeeded in determining most of~~ the ~~hydrogen (H) and deuterium (D) atomic positions in~~ the ~~decameric d~~(~~CCATTAATGG)2 duplex~~. ~~Moreover, the D positions in 27 D2O molecules have been determined~~. ~~In particular~~, the ~~complex water network in the minor groove has been observed in detail~~. ~~By a combined structural analysis using 2.0 A resolution X~~-~~ray and 3.0 A resolution neutron data, it is clear that the spine of hydration is built up, not only by a simple hexagonal hydration pattern (as reported in earlier X~~-ray studies), but also by many other water bridges hydrogen-bonded to the DNA strands. The complexity of the hydration pattern in the minor groove is derived from an extraordinary variety of orientations displayed by the water molecules.	+	The line below this paragraph, {{ABSTRACT_PUBMED_15914673}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 15914673 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_15914673}}

	==About this Structure==		==About this Structure==
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	[[Category: Hydration]]		[[Category: Hydration]]
	[[Category: Hydrogen]]		[[Category: Hydrogen]]
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Sat May 3 14~~:01:49 2008''	+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 13:26:48 2008''