1xhh - Revision history

OCA at 14:10, 9 May 2024

OCA — Thu, 09 May 2024 14:10:25 GMT

←Older revision		Revision as of 14:10, 9 May 2024
Line 1:		Line 1:

	==Solution Structure of porcine beta-microseminoprotein==		==Solution Structure of porcine beta-microseminoprotein==
-	<StructureSection load='1xhh' size='340' side='right'caption='[[1xhh~~]], [[NMR_Ensembles_of_Models \| 20 NMR models~~]]' scene=''>	+	<StructureSection load='1xhh' size='340' side='right'caption='[[1xhh]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1xhh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Pig Pig~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XHH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XHH FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1xhh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XHH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XHH FirstGlance]. <br>
-	</td></tr><tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"~~><scene name~~=~~'pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene~~></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xhh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xhh OCA], [https://pdbe.org/1xhh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xhh RCSB], [https://www.ebi.ac.uk/pdbsum/1xhh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xhh ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xhh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xhh OCA], [https://pdbe.org/1xhh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xhh RCSB], [https://www.ebi.ac.uk/pdbsum/1xhh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xhh ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/MSMB_PIG MSMB_PIG]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 31:		Line 33:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Pig~~]]	+	[[Category: Sus scrofa]]
-	[[Category: Chang~~, W C~~]]	+	[[Category: Chang WC]]
-	[[Category: Chen, C]]	+	[[Category: Chen C]]
-	[[Category: Lou~~, Y C~~]]	+	[[Category: Lou YC]]
-	[[Category: Wang, I]]	+	[[Category: Wang I]]
-	[[Category: Wu~~, K P~~]]	+	[[Category: Wu KP]]
-	[[Category: Wu~~, S H]]~~	+	[[Category: Wu SH]]
-	~~[[Category: Beta srand]]~~	+
-	~~[[Category: Beta-microseminoprotein]]~~	+
-	~~[[Category: K+ atpase inhibitor]]~~	+
-	~~[[Category: Na+]]~~	+
-	~~[[Category: Novel fold]]~~	+
-	~~[[Category: Prostatic secretory protein]]~~	+
-	~~[[Category: Solution structure]]~~	+
-	~~[[Category: Unknown function~~]]	+

OCA at 16:38, 27 October 2021

OCA — Wed, 27 Oct 2021 16:38:13 GMT

←Older revision		Revision as of 16:38, 27 October 2021
Line 3:		Line 3:
	<StructureSection load='1xhh' size='340' side='right'caption='[[1xhh]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='1xhh' size='340' side='right'caption='[[1xhh]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1xhh]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Pig Pig]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XHH OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1XHH FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1xhh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pig Pig]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XHH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XHH FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1xhh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xhh OCA], [~~http~~://pdbe.org/1xhh PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1xhh RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1xhh PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1xhh ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xhh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xhh OCA], [https://pdbe.org/1xhh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xhh RCSB], [https://www.ebi.ac.uk/pdbsum/1xhh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xhh ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 17:44, 22 January 2020

OCA — Wed, 22 Jan 2020 17:44:14 GMT

←Older revision		Revision as of 17:44, 22 January 2020
Line 1:		Line 1:

	==Solution Structure of porcine beta-microseminoprotein==		==Solution Structure of porcine beta-microseminoprotein==
-	<StructureSection load='1xhh' size='340' side='right' caption='[[1xhh]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>	+	<StructureSection load='1xhh' size='340' side='right'caption='[[1xhh]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1xhh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pig Pig]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XHH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1XHH FirstGlance]. <br>		<table><tr><td colspan='2'>[[1xhh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pig Pig]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XHH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1XHH FirstGlance]. <br>
Line 30:		Line 30:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Pig]]		[[Category: Pig]]
	[[Category: Chang, W C]]		[[Category: Chang, W C]]

OCA at 07:24, 18 April 2018

OCA — Wed, 18 Apr 2018 07:24:16 GMT

←Older revision		Revision as of 07:24, 18 April 2018
Line 1:		Line 1:
		+
	==Solution Structure of porcine beta-microseminoprotein==		==Solution Structure of porcine beta-microseminoprotein==
	<StructureSection load='1xhh' size='340' side='right' caption='[[1xhh]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='1xhh' size='340' side='right' caption='[[1xhh]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[1xhh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pig Pig]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XHH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1XHH FirstGlance]. <br>		<table><tr><td colspan='2'>[[1xhh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pig Pig]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XHH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1XHH FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1xhh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xhh OCA], [http://pdbe.org/1xhh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1xhh RCSB], [http://www.ebi.ac.uk/pdbsum/1xhh PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1xhh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xhh OCA], [http://pdbe.org/1xhh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1xhh RCSB], [http://www.ebi.ac.uk/pdbsum/1xhh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1xhh ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 10:		Line 11:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xh/1xhh_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xh/1xhh_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 06:22, 8 February 2016

OCA — Mon, 08 Feb 2016 06:22:29 GMT

←Older revision		Revision as of 06:22, 8 February 2016
Line 14:		Line 14:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xhh ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 08:45, 10 September 2015

OCA — Thu, 10 Sep 2015 08:45:30 GMT

←Older revision		Revision as of 08:45, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='1xhh' size='340' side='right' caption='[[1xhh]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='1xhh' size='340' side='right' caption='[[1xhh]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1xhh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Sus_scrofa Sus scrofa~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XHH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1XHH FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1xhh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pig Pig]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XHH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1XHH FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1xhh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xhh OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1xhh RCSB], [http://www.ebi.ac.uk/pdbsum/1xhh PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1xhh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xhh OCA], [http://pdbe.org/1xhh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1xhh RCSB], [http://www.ebi.ac.uk/pdbsum/1xhh PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 24:		Line 24:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1xhh" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Sus scrofa~~]]	+	[[Category: Pig]]
	[[Category: Chang, W C]]		[[Category: Chang, W C]]
	[[Category: Chen, C]]		[[Category: Chen, C]]

OCA at 21:16, 24 December 2014

OCA — Wed, 24 Dec 2014 21:16:49 GMT

←Older revision		Revision as of 21:16, 24 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1xhh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XHH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1XHH FirstGlance]. <br>		<table><tr><td colspan='2'>[[1xhh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XHH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1XHH FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene></td></tr>	+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1xhh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xhh OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1xhh RCSB], [http://www.ebi.ac.uk/pdbsum/1xhh PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1xhh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xhh OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1xhh RCSB], [http://www.ebi.ac.uk/pdbsum/1xhh PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 29:		Line 29:
	</StructureSection>		</StructureSection>
	[[Category: Sus scrofa]]		[[Category: Sus scrofa]]
-	[[Category: Chang, W C.]]	+	[[Category: Chang, W C]]
-	[[Category: Chen, C.]]	+	[[Category: Chen, C]]
-	[[Category: Lou, Y C.]]	+	[[Category: Lou, Y C]]
-	[[Category: Wang, I.]]	+	[[Category: Wang, I]]
-	[[Category: Wu, K P.]]	+	[[Category: Wu, K P]]
-	[[Category: Wu, S H.]]	+	[[Category: Wu, S H]]
	[[Category: Beta srand]]		[[Category: Beta srand]]
	[[Category: Beta-microseminoprotein]]		[[Category: Beta-microseminoprotein]]

OCA at 21:32, 29 September 2014

OCA — Mon, 29 Sep 2014 21:32:38 GMT

←Older revision		Revision as of 21:32, 29 September 2014
Line 1:		Line 1:
-	[[~~Image~~:1xhh.~~png\|left~~\|200px]]	+	==Solution Structure of porcine beta-microseminoprotein==
		+	<StructureSection load='1xhh' size='340' side='right' caption='[[1xhh]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1xhh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XHH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1XHH FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene></td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1xhh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xhh OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1xhh RCSB], [http://www.ebi.ac.uk/pdbsum/1xhh PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xh/1xhh_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	A number of beta-microseminoproteins (MSPs) have been identified from different species. MSPs are all non-glycosylated and disulfide bond-rich, but show a relatively low level of conservation. Although all Cys residues are conserved, our previous study showed that the disulfide bond pairings differ in porcine and ostrich MSPs. Despite the variety of biological functions that have been suggested for MSPs, their real function is still poorly understood. Furthermore, no 3D structure has been reported for any MSP, so the determination of the structure and function of MSPs is an interesting and important task. In the present study, we determined the 3D solution structure of porcine MSP on the basis of 1018 restraints. The ensemble of 20 NMR structures was well defined, with average root-mean-square deviations of 0.83(+/-0.16) A for the backbone atoms and 1.37(+/-0.17) A for heavy-atoms in residues 2-90. The 3D structure showed that porcine MSP is clearly composed of two domains, an N-terminal domain consisting of one double-stranded and one four-stranded antiparallel beta-sheet, and a C-terminal domain consisting of two double-stranded antiparallel beta-sheet. The orientation of the two domains was derived mainly on the basis of long-range NOEs and verified using residual dipolar coupling data. No inter-domain hydrophobic interaction or H-bonding was detected. However, a number of charged residues were found in close proximity between the domains, indicating that electrostatic interaction may be the key factor for the orientation of the two domains. This is the first report of a 3D structure for any MSP. In addition, structural comparison based on distance matrix alignment (DALI), class architecture topology and homologous superfamily (CATH) and combinatorial extension (CE) methods revealed that porcine MSP has a novel structure with a new fold providing valuable information for future structural studies on other MSPs and for understanding their biological functions.

-	~~{{STRUCTURE_1xhh\| PDB=1xhh \| SCENE= }}~~	+	Novel solution structure of porcine beta-microseminoprotein.,Wang I, Lou YC, Wu KP, Wu SH, Chang WC, Chen C J Mol Biol. 2005 Mar 4;346(4):1071-82. Epub 2005 Jan 16. PMID:15701518<ref>PMID:15701518</ref>

-	~~===Solution Structure~~ of ~~porcine beta-microseminoprotein===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_15701518}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[1xhh]] is a 1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Sus_scrofa Sus scrofa]~~. ~~Full experimental information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=1XHH OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:015701518<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Sus scrofa]]		[[Category: Sus scrofa]]
	[[Category: Chang, W C.]]		[[Category: Chang, W C.]]

OCA: Protected "1xhh" [edit=sysop:move=sysop]

OCA — Sat, 05 Jan 2013 12:50:51 GMT

Protected "1xhh" [edit=sysop:move=sysop]

←Older revision

Revision as of 12:50, 5 January 2013

OCA at 12:50, 5 January 2013

OCA — Sat, 05 Jan 2013 12:50:48 GMT

←Older revision		Revision as of 12:50, 5 January 2013
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-	{{Seed}}
	[[Image:1xhh.png\|left\|200px]]		[[Image:1xhh.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1xhh", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_1xhh\| PDB=1xhh \| SCENE= }}		{{STRUCTURE_1xhh\| PDB=1xhh \| SCENE= }}

	===Solution Structure of porcine beta-microseminoprotein===		===Solution Structure of porcine beta-microseminoprotein===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_15701518}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 15701518 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_15701518}}		{{ABSTRACT_PUBMED_15701518}}

	==About this Structure==		==About this Structure==
-	~~1XHH~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XHH OCA].	+	[[1xhh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XHH OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~15701518~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:015701518</ref><references group="xtra"/>
	[[Category: Sus scrofa]]		[[Category: Sus scrofa]]
	[[Category: Chang, W C.]]		[[Category: Chang, W C.]]
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	[[Category: Prostatic secretory protein]]		[[Category: Prostatic secretory protein]]
	[[Category: Solution structure]]		[[Category: Solution structure]]
-		+	[[Category: Unknown function]]
-	~~''Page seeded by~~ [~~http~~:~~//oca.weizmann.ac.il/oca OCA~~ ] ~~on Mon Feb 16 19:46:03 2009''~~	+