1xl9 - Revision history

OCA at 06:47, 23 August 2023

OCA — Wed, 23 Aug 2023 06:47:19 GMT

←Older revision		Revision as of 06:47, 23 August 2023
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	<StructureSection load='1xl9' size='340' side='right'caption='[[1xl9]], [[Resolution\|resolution]] 2.23Å' scene=''>		<StructureSection load='1xl9' size='340' side='right'caption='[[1xl9]], [[Resolution\|resolution]] 2.23Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1xl9]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~"bacillus_cereus_var._anthracis"_(cohn_1872)_smith_et_al._1946 "bacillus cereus var.~~ anthracis~~" (cohn 1872) smith et al. 1946~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XL9 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=1XL9 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1xl9]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_anthracis Bacillus anthracis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XL9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XL9 FirstGlance]. <br>
-	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~><div style='overflow: auto; max-height: 3em;'>[[1xky\|1xky]]</div></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.23Å</td></tr>
-	~~<tr~~ id~~='gene'><td class~~="~~sblockLbl~~">~~<b>~~[[~~Gene~~\|~~Gene:~~]]~~</b></td><td class="sblockDat">DapA-~~2 ~~([http://www~~.~~ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info~~&~~srchmode=5&id=1392 "Bacillus cereus var. anthracis" (Cohn 1872) Smith et al. 1946])</td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xl9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xl9 OCA], [https://pdbe.org/1xl9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xl9 RCSB], [https://www.ebi.ac.uk/pdbsum/1xl9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xl9 ProSAT]</span></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/4-hydroxy-tetrahydrodipicolinate_synthase 4-hydroxy-tetrahydrodipicolinate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.3.3.7 4.3.3.7] </span></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=1xl9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xl9 OCA], [~~http~~://pdbe.org/1xl9 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1xl9 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1xl9 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1xl9 ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/~~Q81WN7_BACAN Q81WN7_BACAN]~~] Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA~~) (By similarity~~).[~~SAAS~~:~~SAAS020625_004_011311~~][HAMAP-Rule:MF_00418]	+	[https://www.uniprot.org/uniprot/A0A6L7H340_BACAN A0A6L7H340_BACAN] Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).[ARBA:ARBA00003294][HAMAP-Rule:MF_00418]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~4-hydroxy-tetrahydrodipicolinate synthase~~]]	+	[[Category: Bacillus anthracis]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Blagova, E]]	+	[[Category: Blagova E]]
-	[[Category: Brannigan~~, J A~~]]	+	[[Category: Brannigan JA]]
-	[[Category: Fogg~~, M J~~]]	+	[[Category: Fogg MJ]]
-	[[Category: Kalliomaa~~, A K~~]]	+	[[Category: Kalliomaa AK]]
-	[[Category: Levdikov, V]]	+	[[Category: Levdikov V]]
-	[[Category: Milioti, N]]	+	[[Category: Milioti N]]
-	[[Category: Wilkinson~~, A J~~]]	+	[[Category: Wilkinson AJ]]
-	[[Category: Wilson~~, K S]]~~	+	[[Category: Wilson KS]]
-	~~[[Category: Crystal structure]]~~	+
-	~~[[Category: Dihydrodipicolinate synthase]]~~	+
-	~~[[Category: Lyase]]~~	+
-	~~[[Category: Lysine biosynthesis]]~~	+
-	~~[[Category: Spine]]~~	+
-	~~[[Category: Tim barrel~~]]	+

OCA at 10:06, 6 January 2021

OCA — Wed, 06 Jan 2021 10:06:19 GMT

←Older revision		Revision as of 10:06, 6 January 2021
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	==Crystal Structure of Dihydrodipicolinate Synthase DapA-2 (BA3935) from Bacillus Anthracis.==		==Crystal Structure of Dihydrodipicolinate Synthase DapA-2 (BA3935) from Bacillus Anthracis.==
-	<StructureSection load='1xl9' size='340' side='right' caption='[[1xl9]], [[Resolution\|resolution]] 2.23Å' scene=''>	+	<StructureSection load='1xl9' size='340' side='right'caption='[[1xl9]], [[Resolution\|resolution]] 2.23Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1xl9]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_cereus_var._anthracis"_(cohn_1872)_smith_et_al._1946 "bacillus cereus var. anthracis" (cohn 1872) smith et al. 1946]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XL9 OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1XL9 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1xl9]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_cereus_var._anthracis"_(cohn_1872)_smith_et_al._1946 "bacillus cereus var. anthracis" (cohn 1872) smith et al. 1946]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XL9 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1XL9 FirstGlance]. <br>
-	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1xky\|1xky]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1xky\|1xky]]</div></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">DapA-2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1392 "Bacillus cereus var. anthracis" (Cohn 1872) Smith et al. 1946])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">DapA-2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1392 "Bacillus cereus var. anthracis" (Cohn 1872) Smith et al. 1946])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/4-hydroxy-tetrahydrodipicolinate_synthase 4-hydroxy-tetrahydrodipicolinate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.3.3.7 4.3.3.7] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/4-hydroxy-tetrahydrodipicolinate_synthase 4-hydroxy-tetrahydrodipicolinate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.3.3.7 4.3.3.7] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1xl9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xl9 OCA], [http://pdbe.org/1xl9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1xl9 RCSB], [http://www.ebi.ac.uk/pdbsum/1xl9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1xl9 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1xl9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xl9 OCA], [http://pdbe.org/1xl9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1xl9 RCSB], [http://www.ebi.ac.uk/pdbsum/1xl9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1xl9 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	</StructureSection>		</StructureSection>
	[[Category: 4-hydroxy-tetrahydrodipicolinate synthase]]		[[Category: 4-hydroxy-tetrahydrodipicolinate synthase]]
		+	[[Category: Large Structures]]
	[[Category: Blagova, E]]		[[Category: Blagova, E]]
	[[Category: Brannigan, J A]]		[[Category: Brannigan, J A]]

OCA at 07:05, 18 April 2018

OCA — Wed, 18 Apr 2018 07:05:11 GMT

←Older revision		Revision as of 07:05, 18 April 2018
Line 1:		Line 1:
		+
	==Crystal Structure of Dihydrodipicolinate Synthase DapA-2 (BA3935) from Bacillus Anthracis.==		==Crystal Structure of Dihydrodipicolinate Synthase DapA-2 (BA3935) from Bacillus Anthracis.==
	<StructureSection load='1xl9' size='340' side='right' caption='[[1xl9]], [[Resolution\|resolution]] 2.23Å' scene=''>		<StructureSection load='1xl9' size='340' side='right' caption='[[1xl9]], [[Resolution\|resolution]] 2.23Å' scene=''>
Line 6:		Line 7:
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">DapA-2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1392 "Bacillus cereus var. anthracis" (Cohn 1872) Smith et al. 1946])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">DapA-2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1392 "Bacillus cereus var. anthracis" (Cohn 1872) Smith et al. 1946])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/4-hydroxy-tetrahydrodipicolinate_synthase 4-hydroxy-tetrahydrodipicolinate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.3.3.7 4.3.3.7] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/4-hydroxy-tetrahydrodipicolinate_synthase 4-hydroxy-tetrahydrodipicolinate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.3.3.7 4.3.3.7] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1xl9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xl9 OCA], [http://pdbe.org/1xl9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1xl9 RCSB], [http://www.ebi.ac.uk/pdbsum/1xl9 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1xl9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xl9 OCA], [http://pdbe.org/1xl9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1xl9 RCSB], [http://www.ebi.ac.uk/pdbsum/1xl9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1xl9 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xl/1xl9_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xl/1xl9_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 05:39, 8 February 2016

OCA — Mon, 08 Feb 2016 05:39:27 GMT

←Older revision		Revision as of 05:39, 8 February 2016
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	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xl9 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>

OCA at 08:26, 10 September 2015

OCA — Thu, 10 Sep 2015 08:26:52 GMT

←Older revision		Revision as of 08:26, 10 September 2015
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	<StructureSection load='1xl9' size='340' side='right' caption='[[1xl9]], [[Resolution\|resolution]] 2.23Å' scene=''>		<StructureSection load='1xl9' size='340' side='right' caption='[[1xl9]], [[Resolution\|resolution]] 2.23Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1xl9]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Bacillus_anthracis Bacillus~~ anthracis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XL9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1XL9 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1xl9]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_cereus_var._anthracis"_(cohn_1872)_smith_et_al._1946 "bacillus cereus var. anthracis" (cohn 1872) smith et al. 1946]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XL9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1XL9 FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1xky\|1xky]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1xky\|1xky]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">DapA-2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1392 Bacillus anthracis])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">DapA-2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1392 "Bacillus cereus var. anthracis" (Cohn 1872) Smith et al. 1946])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/~~Dihydrodipicolinate_synthase Dihydrodipicolinate~~ synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.52 4.2.1.52] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/4-hydroxy-tetrahydrodipicolinate_synthase 4-hydroxy-tetrahydrodipicolinate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.3.3.7 4.3.3.7] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1xl9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xl9 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1xl9 RCSB], [http://www.ebi.ac.uk/pdbsum/1xl9 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1xl9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xl9 OCA], [http://pdbe.org/1xl9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1xl9 RCSB], [http://www.ebi.ac.uk/pdbsum/1xl9 PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bacillus anthracis]]~~	+	[[Category: 4-hydroxy-tetrahydrodipicolinate synthase]]
-	~~[[Category: Dihydrodipicolinate~~ synthase]]	+
	[[Category: Blagova, E]]		[[Category: Blagova, E]]
	[[Category: Brannigan, J A]]		[[Category: Brannigan, J A]]
Line 36:		Line 35:
	[[Category: Wilson, K S]]		[[Category: Wilson, K S]]
	[[Category: Crystal structure]]		[[Category: Crystal structure]]
		+	[[Category: Dihydrodipicolinate synthase]]
	[[Category: Lyase]]		[[Category: Lyase]]
	[[Category: Lysine biosynthesis]]		[[Category: Lysine biosynthesis]]
	[[Category: Spine]]		[[Category: Spine]]
	[[Category: Tim barrel]]		[[Category: Tim barrel]]

OCA at 21:02, 24 December 2014

OCA — Wed, 24 Dec 2014 21:02:09 GMT

←Older revision		Revision as of 21:02, 24 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1xl9]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_anthracis Bacillus anthracis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XL9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1XL9 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1xl9]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_anthracis Bacillus anthracis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XL9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1XL9 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1xky\|1xky]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1xky\|1xky]]</td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">DapA-2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1392 Bacillus anthracis])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">DapA-2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1392 Bacillus anthracis])</td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dihydrodipicolinate_synthase Dihydrodipicolinate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.52 4.2.1.52] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dihydrodipicolinate_synthase Dihydrodipicolinate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.52 4.2.1.52] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1xl9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xl9 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1xl9 RCSB], [http://www.ebi.ac.uk/pdbsum/1xl9 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1xl9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xl9 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1xl9 RCSB], [http://www.ebi.ac.uk/pdbsum/1xl9 PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/Q81WN7_BACAN Q81WN7_BACAN]] Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA) (By similarity).[SAAS:SAAS020625_004_011311][HAMAP-Rule:MF_00418]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 25:		Line 27:
	[[Category: Bacillus anthracis]]		[[Category: Bacillus anthracis]]
	[[Category: Dihydrodipicolinate synthase]]		[[Category: Dihydrodipicolinate synthase]]
-	[[Category: Blagova, E.]]	+	[[Category: Blagova, E]]
-	[[Category: Brannigan, J A.]]	+	[[Category: Brannigan, J A]]
-	[[Category: Fogg, M J.]]	+	[[Category: Fogg, M J]]
-	[[Category: Kalliomaa, A K.]]	+	[[Category: Kalliomaa, A K]]
-	[[Category: Levdikov, V.]]	+	[[Category: Levdikov, V]]
-	[[Category: Milioti, N.]]	+	[[Category: Milioti, N]]
-	[[Category: Wilkinson, A J.]]	+	[[Category: Wilkinson, A J]]
-	[[Category: Wilson, K S.]]	+	[[Category: Wilson, K S]]
	[[Category: Crystal structure]]		[[Category: Crystal structure]]
-	[[Category: Dihydrodipicolinate synthase]]
	[[Category: Lyase]]		[[Category: Lyase]]
	[[Category: Lysine biosynthesis]]		[[Category: Lysine biosynthesis]]
	[[Category: Spine]]		[[Category: Spine]]
	[[Category: Tim barrel]]		[[Category: Tim barrel]]

OCA at 11:07, 3 October 2014

OCA — Fri, 03 Oct 2014 11:07:32 GMT

←Older revision		Revision as of 11:07, 3 October 2014
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-	~~[[Image:1xl9.png\|left\|200px]]~~	+	==Crystal Structure of Dihydrodipicolinate Synthase DapA-2 (BA3935) from Bacillus Anthracis.==
-		+	<StructureSection load='1xl9' size='340' side='right' caption='[[1xl9]], [[Resolution\|resolution]] 2.23Å' scene=''>
-	~~{{STRUCTURE_1xl9\| PDB=1xl9 \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[1xl9]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_anthracis Bacillus anthracis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XL9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1XL9 FirstGlance]. <br>
-	===Crystal Structure of Dihydrodipicolinate Synthase DapA-2 (BA3935) from Bacillus Anthracis.===	+	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1xky\|1xky]]</td></tr>
-		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">DapA-2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1392 Bacillus anthracis])</td></tr>
-		+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dihydrodipicolinate_synthase Dihydrodipicolinate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.52 4.2.1.52] </span></td></tr>
-	==~~About this Structure~~==	+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1xl9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xl9 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1xl9 RCSB], [http://www.ebi.ac.uk/pdbsum/1xl9 PDBsum]</span></td></tr>
-	[[1xl9]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_anthracis Bacillus anthracis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XL9 OCA].	+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xl/1xl9_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>

	==See Also==		==See Also==
-	*[[Dihydrodipicolinate ~~Synthase~~\|Dihydrodipicolinate ~~Synthase~~]]	+	*[[Dihydrodipicolinate synthase\|Dihydrodipicolinate synthase]]
-		+	__TOC__
-	~~==Reference==~~	+	</StructureSection>
-	~~<ref group="xtra">PMID:016287120</ref>~~<~~references group="xtra"~~/>	+
	[[Category: Bacillus anthracis]]		[[Category: Bacillus anthracis]]
	[[Category: Dihydrodipicolinate synthase]]		[[Category: Dihydrodipicolinate synthase]]

OCA: Protected "1xl9" [edit=sysop:move=sysop]

OCA — Sat, 20 Oct 2012 09:06:11 GMT

Protected "1xl9" [edit=sysop:move=sysop]

←Older revision

Revision as of 09:06, 20 October 2012

OCA at 09:06, 20 October 2012

OCA — Sat, 20 Oct 2012 09:06:06 GMT

←Older revision		Revision as of 09:06, 20 October 2012
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-	{{Seed}}
	[[Image:1xl9.png\|left\|200px]]		[[Image:1xl9.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1xl9", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_1xl9\| PDB=1xl9 \| SCENE= }}		{{STRUCTURE_1xl9\| PDB=1xl9 \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	~~1XL9~~ is a 4 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Bacillus_anthracis Bacillus anthracis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XL9 OCA].	+	[[1xl9]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_anthracis Bacillus anthracis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XL9 OCA].
		+
		+	==See Also==
		+	*[[Dihydrodipicolinate Synthase\|Dihydrodipicolinate Synthase]]

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~16287120~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:016287120</ref><references group="xtra"/>
	[[Category: Bacillus anthracis]]		[[Category: Bacillus anthracis]]
	[[Category: Dihydrodipicolinate synthase]]		[[Category: Dihydrodipicolinate synthase]]
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	[[Category: Crystal structure]]		[[Category: Crystal structure]]
	[[Category: Dihydrodipicolinate synthase]]		[[Category: Dihydrodipicolinate synthase]]
		+	[[Category: Lyase]]
	[[Category: Lysine biosynthesis]]		[[Category: Lysine biosynthesis]]
	[[Category: Spine]]		[[Category: Spine]]
	[[Category: Tim barrel]]		[[Category: Tim barrel]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 19:13:20 2009''

OCA at 17:14, 16 February 2009

OCA — Mon, 16 Feb 2009 17:14:22 GMT

←Older revision		Revision as of 17:14, 16 February 2009
Line 14:		Line 14:

	==About this Structure==		==About this Structure==
-	1XL9 is a ~~[[Single protein]]~~ structure of ~~sequence~~ from [http://en.wikipedia.org/wiki/Bacillus_anthracis Bacillus anthracis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XL9 OCA].	+	1XL9 is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Bacillus_anthracis Bacillus anthracis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XL9 OCA].

	==Reference==		==Reference==
-	Crystal structure of dihydrodipicolinate synthase (BA3935) from Bacillus anthracis at 1.94 A resolution., Blagova E, Levdikov V, Milioti N, Fogg MJ, Kalliomaa AK, Brannigan JA, Wilson KS, Wilkinson AJ, Proteins. 2006 Jan 1;62(1):297-301. PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/16287120 16287120]~~	+	<ref group="xtra">PMID:16287120</ref><references group="xtra"/>
	[[Category: Bacillus anthracis]]		[[Category: Bacillus anthracis]]
	[[Category: Dihydrodipicolinate synthase]]		[[Category: Dihydrodipicolinate synthase]]
-	[[Category: Single protein]]
	[[Category: Blagova, E.]]		[[Category: Blagova, E.]]
	[[Category: Brannigan, J A.]]		[[Category: Brannigan, J A.]]
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	[[Category: Tim barrel]]		[[Category: Tim barrel]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Sun Jul 27 23~~:34:~~58 2008~~''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 19:13:20 2009''