1yc6 - Revision history

OCA at 07:14, 9 August 2023

OCA — Wed, 09 Aug 2023 07:14:26 GMT

←Older revision		Revision as of 07:14, 9 August 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1yc6]] is a 30 chain structure with sequence from [https://en.wikipedia.org/wiki/Brome_mosaic_virus Brome mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YC6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YC6 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1yc6]] is a 30 chain structure with sequence from [https://en.wikipedia.org/wiki/Brome_mosaic_virus Brome mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YC6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YC6 FirstGlance]. <br>
-	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat">~~<div style='overflow: auto; max~~-~~height: 3em;'>~~[[~~1js9~~\|~~1js9~~]]~~</div>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.9Å</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yc6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yc6 OCA], [https://pdbe.org/1yc6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yc6 RCSB], [https://www.ebi.ac.uk/pdbsum/1yc6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yc6 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yc6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yc6 OCA], [https://pdbe.org/1yc6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yc6 RCSB], [https://www.ebi.ac.uk/pdbsum/1yc6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yc6 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/CAPSD_BMV CAPSD_BMV]] Capsid protein. Binds specifically to the subgenomic RNA4 to ensure selective packaging.	+	[https://www.uniprot.org/uniprot/CAPSD_BMV CAPSD_BMV] Capsid protein. Binds specifically to the subgenomic RNA4 to ensure selective packaging.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 27:		Line 27:
	[[Category: Brome mosaic virus]]		[[Category: Brome mosaic virus]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Larson~~, S B~~]]	+	[[Category: Larson SB]]
-	[[Category: Lucas~~, R W~~]]	+	[[Category: Lucas RW]]
-	[[Category: McPherson, A]]	+	[[Category: McPherson A]]
-	~~[[Category: Almv]]~~	+
-	~~[[Category: Assembly]]~~	+
-	~~[[Category: Bmv]]~~	+
-	~~[[Category: Icosahedral virus]]~~	+
-	~~[[Category: Proteolysis]]~~	+
-	~~[[Category: Structural transition]]~~	+
-	~~[[Category: Symmetry]]~~	+
-	~~[[Category: Virus~~]]	+

OCA at 16:25, 3 November 2021

OCA — Wed, 03 Nov 2021 16:25:59 GMT

←Older revision		Revision as of 16:25, 3 November 2021
Line 3:		Line 3:
	<StructureSection load='1yc6' size='340' side='right'caption='[[1yc6]], [[Resolution\|resolution]] 2.90Å' scene=''>		<StructureSection load='1yc6' size='340' side='right'caption='[[1yc6]], [[Resolution\|resolution]] 2.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1yc6]] is a 30 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Brome_mosaic_virus Brome mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YC6 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1YC6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1yc6]] is a 30 chain structure with sequence from [https://en.wikipedia.org/wiki/Brome_mosaic_virus Brome mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YC6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YC6 FirstGlance]. <br>
-	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1js9\|1js9]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1js9\|1js9]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1yc6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yc6 OCA], [~~http~~://pdbe.org/1yc6 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1yc6 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1yc6 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1yc6 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yc6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yc6 OCA], [https://pdbe.org/1yc6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yc6 RCSB], [https://www.ebi.ac.uk/pdbsum/1yc6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yc6 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/CAPSD_BMV CAPSD_BMV]] Capsid protein. Binds specifically to the subgenomic RNA4 to ensure selective packaging.	+	[[https://www.uniprot.org/uniprot/CAPSD_BMV CAPSD_BMV]] Capsid protein. Binds specifically to the subgenomic RNA4 to ensure selective packaging.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 20:		Line 20:

	==See Also==		==See Also==
-	*[[Virus coat ~~protein~~\|Virus coat ~~protein~~]]	+	*[[Virus coat proteins 3D structures\|Virus coat proteins 3D structures]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 16:34, 29 January 2020

OCA — Wed, 29 Jan 2020 16:34:27 GMT

←Older revision		Revision as of 16:34, 29 January 2020
Line 1:		Line 1:

	==Crystallographic Structure of the T=1 Particle of Brome Mosaic Virus==		==Crystallographic Structure of the T=1 Particle of Brome Mosaic Virus==
-	<StructureSection load='1yc6' size='340' side='right' caption='[[1yc6]], [[Resolution\|resolution]] 2.90Å' scene=''>	+	<StructureSection load='1yc6' size='340' side='right'caption='[[1yc6]], [[Resolution\|resolution]] 2.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1yc6]] is a 30 chain structure with sequence from [http://en.wikipedia.org/wiki/Brome_mosaic_virus Brome mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YC6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YC6 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1yc6]] is a 30 chain structure with sequence from [http://en.wikipedia.org/wiki/Brome_mosaic_virus Brome mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YC6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YC6 FirstGlance]. <br>
Line 26:		Line 26:
	</StructureSection>		</StructureSection>
	[[Category: Brome mosaic virus]]		[[Category: Brome mosaic virus]]
		+	[[Category: Large Structures]]
	[[Category: Larson, S B]]		[[Category: Larson, S B]]
	[[Category: Lucas, R W]]		[[Category: Lucas, R W]]

OCA at 06:22, 25 April 2018

OCA — Wed, 25 Apr 2018 06:22:25 GMT

←Older revision		Revision as of 06:22, 25 April 2018
Line 1:		Line 1:
		+
	==Crystallographic Structure of the T=1 Particle of Brome Mosaic Virus==		==Crystallographic Structure of the T=1 Particle of Brome Mosaic Virus==
	<StructureSection load='1yc6' size='340' side='right' caption='[[1yc6]], [[Resolution\|resolution]] 2.90Å' scene=''>		<StructureSection load='1yc6' size='340' side='right' caption='[[1yc6]], [[Resolution\|resolution]] 2.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1yc6]] is a 30 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Bmv Bmv~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YC6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YC6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1yc6]] is a 30 chain structure with sequence from [http://en.wikipedia.org/wiki/Brome_mosaic_virus Brome mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YC6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YC6 FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1js9\|1js9]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1js9\|1js9]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yc6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yc6 OCA], [http://pdbe.org/1yc6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1yc6 RCSB], [http://www.ebi.ac.uk/pdbsum/1yc6 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yc6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yc6 OCA], [http://pdbe.org/1yc6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1yc6 RCSB], [http://www.ebi.ac.uk/pdbsum/1yc6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1yc6 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 24:		Line 25:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bmv~~]]	+	[[Category: Brome mosaic virus]]
	[[Category: Larson, S B]]		[[Category: Larson, S B]]
	[[Category: Lucas, R W]]		[[Category: Lucas, R W]]
Line 30:		Line 31:
	[[Category: Almv]]		[[Category: Almv]]
	[[Category: Assembly]]		[[Category: Assembly]]
		+	[[Category: Bmv]]
	[[Category: Icosahedral virus]]		[[Category: Icosahedral virus]]
	[[Category: Proteolysis]]		[[Category: Proteolysis]]

OCA at 20:37, 10 September 2015

OCA — Thu, 10 Sep 2015 20:37:05 GMT

←Older revision		Revision as of 20:37, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='1yc6' size='340' side='right' caption='[[1yc6]], [[Resolution\|resolution]] 2.90Å' scene=''>		<StructureSection load='1yc6' size='340' side='right' caption='[[1yc6]], [[Resolution\|resolution]] 2.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1yc6]] is a 30 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Brome_mosaic_virus Brome mosaic virus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YC6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YC6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1yc6]] is a 30 chain structure with sequence from [http://en.wikipedia.org/wiki/Bmv Bmv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YC6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YC6 FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1js9\|1js9]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1js9\|1js9]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yc6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yc6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1yc6 RCSB], [http://www.ebi.ac.uk/pdbsum/1yc6 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yc6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yc6 OCA], [http://pdbe.org/1yc6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1yc6 RCSB], [http://www.ebi.ac.uk/pdbsum/1yc6 PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[http://www.uniprot.org/uniprot/~~COAT_BMV COAT_BMV~~]] Capsid protein. Binds specifically to the subgenomic RNA4 to ensure selective packaging.	+	[[http://www.uniprot.org/uniprot/CAPSD_BMV CAPSD_BMV]] Capsid protein. Binds specifically to the subgenomic RNA4 to ensure selective packaging.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 16:		Line 16:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1yc6" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
Line 23:		Line 24:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Brome mosaic virus~~]]	+	[[Category: Bmv]]
	[[Category: Larson, S B]]		[[Category: Larson, S B]]
	[[Category: Lucas, R W]]		[[Category: Lucas, R W]]
Line 29:		Line 30:
	[[Category: Almv]]		[[Category: Almv]]
	[[Category: Assembly]]		[[Category: Assembly]]
-	[[Category: Bmv]]
	[[Category: Icosahedral virus]]		[[Category: Icosahedral virus]]
	[[Category: Proteolysis]]		[[Category: Proteolysis]]

OCA at 05:50, 25 December 2014

OCA — Thu, 25 Dec 2014 05:50:11 GMT

←Older revision		Revision as of 05:50, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1yc6]] is a 30 chain structure with sequence from [http://en.wikipedia.org/wiki/Brome_mosaic_virus Brome mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YC6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YC6 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1yc6]] is a 30 chain structure with sequence from [http://en.wikipedia.org/wiki/Brome_mosaic_virus Brome mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YC6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YC6 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1js9\|1js9]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1js9\|1js9]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yc6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yc6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1yc6 RCSB], [http://www.ebi.ac.uk/pdbsum/1yc6 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yc6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yc6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1yc6 RCSB], [http://www.ebi.ac.uk/pdbsum/1yc6 PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/COAT_BMV COAT_BMV]] Capsid protein. Binds specifically to the subgenomic RNA4 to ensure selective packaging.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 22:		Line 24:
	</StructureSection>		</StructureSection>
	[[Category: Brome mosaic virus]]		[[Category: Brome mosaic virus]]
-	[[Category: Larson, S B.]]	+	[[Category: Larson, S B]]
-	[[Category: Lucas, R W.]]	+	[[Category: Lucas, R W]]
-	[[Category: McPherson, A.]]	+	[[Category: McPherson, A]]
	[[Category: Almv]]		[[Category: Almv]]
	[[Category: Assembly]]		[[Category: Assembly]]

OCA at 23:10, 28 September 2014

OCA — Sun, 28 Sep 2014 23:10:13 GMT

←Older revision		Revision as of 23:10, 28 September 2014
Line 1:		Line 1:
-	[[~~Image:~~1yc6.~~png~~\|~~left~~\|~~200px~~]]	+	==Crystallographic Structure of the T=1 Particle of Brome Mosaic Virus==
		+	<StructureSection load='1yc6' size='340' side='right' caption='[[1yc6]], [[Resolution\|resolution]] 2.90Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1yc6]] is a 30 chain structure with sequence from [http://en.wikipedia.org/wiki/Brome_mosaic_virus Brome mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YC6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YC6 FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1js9\|1js9]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yc6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yc6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1yc6 RCSB], [http://www.ebi.ac.uk/pdbsum/1yc6 PDBsum]</span></td></tr>
		+	<table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	T=1 icosahedral particles of amino terminally truncated brome mosaic virus (BMV) protein were created by treatment of the wild-type T=3 virus with 1M CaCl2 and crystallized from sodium malonate. Diffraction data were collected from frozen crystals to beyond 2.9 A resolution and the structure determined by molecular replacement and phase extension. The particles are composed of pentameric capsomeres from the wild-type virions which have reoriented with respect to the original particle pentameric axes by rotations of 37 degrees , and formed tenuous interactions with one another, principally through conformationally altered C-terminal polypeptides. Otherwise, the pentamers are virtually superimposable upon those of the original T=3 BMV particles. The T=1 particles, in the crystals, are not perfect icosahedra, but deviate slightly from exact symmetry, possibly due to packing interactions. This suggests that the T=1 particles are deformable, which is consistent with the loose arrangement of pentamers and latticework of holes that penetrate the surface. Atomic force microscopy showed that the T=3 to T=1 transition could occur by shedding of hexameric capsomeres and restructuring of remaining pentamers accompanied by direct condensation. Knowledge of the structures of the BMV wild-type and T=1 particles now permit us to propose a tentative model for that process. A comparison of the BMV T=1 particles was made with the reassembled T=1 particles produced from the coat protein of trypsin treated alfalfa mosaic virus (AlMV), another bromovirus. There is little resemblance between the two particles. The BMV particle, with a maximum diameter of 195 A, is made from distinctive pentameric capsomeres with large holes along the 3-fold axis, while the AlMV particle, of approximate maximum diameter 220 A, has subunits closely packed around the 3-fold axis, large holes along the 5-fold axis, and few contacts within pentamers. In both particles crucial linkages are made about icosahedral dyads.

-	~~{{STRUCTURE_1yc6\| PDB~~=~~1yc6 \| SCENE= }}~~	+	Crystallographic structure of the T=1 particle of brome mosaic virus.,Larson SB, Lucas RW, McPherson A J Mol Biol. 2005 Feb 25;346(3):815-31. Epub 2005 Jan 12. PMID:15713465<ref>PMID:15713465</ref>

-	~~===Crystallographic Structure~~ of the ~~T=1 Particle of Brome Mosaic Virus===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_15713465}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[1yc6]] is a 30 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Brome_mosaic_virus Brome mosaic virus]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=1YC6 OCA].~~	+

	==See Also==		==See Also==
	*[[Virus coat protein\|Virus coat protein]]		*[[Virus coat protein\|Virus coat protein]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	<~~ref group="xtra">PMID:015713465<~~/~~ref~~><~~ref group="xtra">PMID:011916381</ref><ref group="xtra">PMID:011485397</ref><references group="xtra"~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Brome mosaic virus]]		[[Category: Brome mosaic virus]]
	[[Category: Larson, S B.]]		[[Category: Larson, S B.]]

OCA at 13:19, 20 October 2012

OCA — Sat, 20 Oct 2012 13:19:59 GMT

←Older revision		Revision as of 13:19, 20 October 2012
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	[[Image:1yc6.png\|left\|200px]]		[[Image:1yc6.png\|left\|200px]]

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	{{STRUCTURE_1yc6\| PDB=1yc6 \| SCENE= }}		{{STRUCTURE_1yc6\| PDB=1yc6 \| SCENE= }}

	===Crystallographic Structure of the T=1 Particle of Brome Mosaic Virus===		===Crystallographic Structure of the T=1 Particle of Brome Mosaic Virus===

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	{{ABSTRACT_PUBMED_15713465}}		{{ABSTRACT_PUBMED_15713465}}

	==About this Structure==		==About this Structure==
	[[1yc6]] is a 30 chain structure with sequence from [http://en.wikipedia.org/wiki/Brome_mosaic_virus Brome mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YC6 OCA].		[[1yc6]] is a 30 chain structure with sequence from [http://en.wikipedia.org/wiki/Brome_mosaic_virus Brome mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YC6 OCA].
		+
		+	==See Also==
		+	*[[Virus coat protein\|Virus coat protein]]

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~15713465~~</ref><ref group="xtra">PMID:~~11916381~~</ref><ref group="xtra">PMID:~~11485397~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:015713465</ref><ref group="xtra">PMID:011916381</ref><ref group="xtra">PMID:011485397</ref><references group="xtra"/>
	[[Category: Brome mosaic virus]]		[[Category: Brome mosaic virus]]
	[[Category: Larson, S B.]]		[[Category: Larson, S B.]]
	[[Category: Lucas, R W.]]		[[Category: Lucas, R W.]]
	[[Category: McPherson, A.]]		[[Category: McPherson, A.]]
		+	[[Category: Almv]]
		+	[[Category: Assembly]]
		+	[[Category: Bmv]]
		+	[[Category: Icosahedral virus]]
		+	[[Category: Proteolysis]]
		+	[[Category: Structural transition]]
		+	[[Category: Symmetry]]
		+	[[Category: Virus]]

OCA: Protected "1yc6" [edit=sysop:move=sysop]

OCA — Wed, 09 Mar 2011 05:43:20 GMT

Protected "1yc6" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:43, 9 March 2011

OCA at 05:43, 9 March 2011

OCA — Wed, 09 Mar 2011 05:43:17 GMT

←Older revision		Revision as of 05:43, 9 March 2011
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-	{{Seed}}
	[[Image:1yc6.png\|left\|200px]]		[[Image:1yc6.png\|left\|200px]]

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	==About this Structure==		==About this Structure==
-	~~1YC6 is a~~ [[~~Single protein~~]] structure of sequence from [http://en.wikipedia.org/wiki/Brome_mosaic_virus Brome mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YC6 OCA].	+	[[1yc6]] is a 30 chain structure with sequence from [http://en.wikipedia.org/wiki/Brome_mosaic_virus Brome mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YC6 OCA].

	==Reference==		==Reference==
-	~~Crystallographic structure of the T~~=~~1 particle of brome mosaic virus., Larson SB, Lucas RW, McPherson A, J Mol Biol. 2005 Feb 25;346(3):815-31. Epub 2005 Jan 12.~~ PMID:~~[http:~~/~~/www.ncbi.nlm.nih.gov/pubmed/15713465 15713465]~~	+	<ref group="xtra">PMID:15713465</ref><ref group="xtra">PMID:11916381</ref><ref group="xtra">PMID:11485397</ref><references group="xtra"/>
-		+
-	~~The crystallographic structure of brome mosaic virus., Lucas RW, Larson SB, McPherson A, J Mol Biol. 2002 Mar 15;317(1):95-108.~~ PMID:~~[http:~~/~~/www.ncbi.nlm.nih.gov/pubmed/11916381 11916381]~~	+
-		+
-	~~Crystallization of Brome mosaic virus and T~~ = ~~1 Brome mosaic virus particles following a structural transition., Lucas RW, Kuznetsov YG, Larson SB, McPherson A, Virology. 2001 Aug 1;286(2):290-303.~~ PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/11485397 11485397]~~	+
	[[Category: Brome mosaic virus]]		[[Category: Brome mosaic virus]]
-	[[Category: Single protein]]
	[[Category: Larson, S B.]]		[[Category: Larson, S B.]]
	[[Category: Lucas, R W.]]		[[Category: Lucas, R W.]]
	[[Category: McPherson, A.]]		[[Category: McPherson, A.]]
-	[[Category: Almv]]
-	[[Category: Assembly]]
-	[[Category: Bmv]]
-	[[Category: Icosahedral virus]]
-	[[Category: Proteolysis]]
-	[[Category: Structural transition]]
-	[[Category: Symmetry]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 11:56:03 2008''