1yw6 - Revision history

OCA at 08:06, 15 May 2024

OCA — Wed, 15 May 2024 08:06:52 GMT

←Older revision		Revision as of 08:06, 15 May 2024
Line 3:		Line 3:
	<StructureSection load='1yw6' size='340' side='right'caption='[[1yw6]], [[Resolution\|resolution]] 3.10Å' scene=''>		<StructureSection load='1yw6' size='340' side='right'caption='[[1yw6]], [[Resolution\|resolution]] 3.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1yw6]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~"bacillus_coli"_migula_1895 "bacillus~~ coli~~" migula 1895~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YW6 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=1YW6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1yw6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YW6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YW6 FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 3.1Å</td></tr>
-	<tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene><~~/td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	~~<tr id~~='~~gene'><td class~~=~~"sblockLbl"><b>[[Gene\|Gene~~:~~]]</b~~></td>~~<td class="sblockDat">astE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])~~</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yw6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yw6 OCA], [https://pdbe.org/1yw6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yw6 RCSB], [https://www.ebi.ac.uk/pdbsum/1yw6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yw6 ProSAT], [https://www.topsan.org/Proteins/NESGC/1yw6 TOPSAN]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=1yw6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yw6 OCA], [~~http~~://pdbe.org/1yw6 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1yw6 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1yw6 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1yw6 ProSAT], [~~http~~://www.topsan.org/Proteins/NESGC/1yw6 TOPSAN]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/ASTE_ECOLI ASTE_ECOLI]] Transforms N(2)-succinylglutamate into succinate and glutamate.<ref>PMID:9696779</ref>	+	[https://www.uniprot.org/uniprot/ASTE_ECOLI ASTE_ECOLI] Transforms N(2)-succinylglutamate into succinate and glutamate.<ref>PMID:9696779</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 25:		Line 24:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bacillus~~ coli ~~migula 1895~~]]	+	[[Category: Escherichia coli]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Acton~~, T B~~]]	+	[[Category: Acton TB]]
-	[[Category: Ciano, M]]	+	[[Category: Ciano M]]
-	[[Category: Forouhar, F]]	+	[[Category: Forouhar F]]
-	[[Category: Hunt~~, J F~~]]	+	[[Category: Hunt JF]]
-	[[Category: Kuzin~~, A P~~]]	+	[[Category: Kuzin AP]]
-	[[Category: Montelione~~, G T]]~~	+	[[Category: Montelione GT]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Tong L]]
-	[[Category: Tong, L]]	+	[[Category: Yong W]]
-	[[Category: Yong, W]]	+
-	~~[[Category: Alpha-beta protein]]~~	+
-	~~[[Category: Hydrolase]]~~	+
-	~~[[Category: Nesg]]~~	+
-	~~[[Category: PSI, Protein structure initiative~~]]	+

OCA at 08:53, 20 January 2021

OCA — Wed, 20 Jan 2021 08:53:56 GMT

←Older revision		Revision as of 08:53, 20 January 2021
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	==Crystal Structure of Succinylglutamate Desuccinylase from Escherichia coli, Northeast Structural Genomics Target ET72.==		==Crystal Structure of Succinylglutamate Desuccinylase from Escherichia coli, Northeast Structural Genomics Target ET72.==
-	<StructureSection load='1yw6' size='340' side='right' caption='[[1yw6]], [[Resolution\|resolution]] 3.10Å' scene=''>	+	<StructureSection load='1yw6' size='340' side='right'caption='[[1yw6]], [[Resolution\|resolution]] 3.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1yw6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YW6 OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1YW6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1yw6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YW6 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1YW6 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">astE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">astE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1yw6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yw6 OCA], [http://pdbe.org/1yw6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1yw6 RCSB], [http://www.ebi.ac.uk/pdbsum/1yw6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1yw6 ProSAT], [http://www.topsan.org/Proteins/NESGC/1yw6 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1yw6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yw6 OCA], [http://pdbe.org/1yw6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1yw6 RCSB], [http://www.ebi.ac.uk/pdbsum/1yw6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1yw6 ProSAT], [http://www.topsan.org/Proteins/NESGC/1yw6 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 26:		Line 26:
	</StructureSection>		</StructureSection>
	[[Category: Bacillus coli migula 1895]]		[[Category: Bacillus coli migula 1895]]
		+	[[Category: Large Structures]]
	[[Category: Acton, T B]]		[[Category: Acton, T B]]
	[[Category: Ciano, M]]		[[Category: Ciano, M]]

OCA at 07:08, 25 April 2018

OCA — Wed, 25 Apr 2018 07:08:31 GMT

←Older revision		Revision as of 07:08, 25 April 2018
Line 1:		Line 1:
		+
	==Crystal Structure of Succinylglutamate Desuccinylase from Escherichia coli, Northeast Structural Genomics Target ET72.==		==Crystal Structure of Succinylglutamate Desuccinylase from Escherichia coli, Northeast Structural Genomics Target ET72.==
	<StructureSection load='1yw6' size='340' side='right' caption='[[1yw6]], [[Resolution\|resolution]] 3.10Å' scene=''>		<StructureSection load='1yw6' size='340' side='right' caption='[[1yw6]], [[Resolution\|resolution]] 3.10Å' scene=''>
Line 6:		Line 7:
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">astE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">astE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yw6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yw6 OCA], [http://pdbe.org/1yw6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1yw6 RCSB], [http://www.ebi.ac.uk/pdbsum/1yw6 PDBsum], [http://www.topsan.org/Proteins/NESGC/1yw6 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yw6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yw6 OCA], [http://pdbe.org/1yw6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1yw6 RCSB], [http://www.ebi.ac.uk/pdbsum/1yw6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1yw6 ProSAT], [http://www.topsan.org/Proteins/NESGC/1yw6 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 14:		Line 15:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yw/1yw6_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yw/1yw6_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 15:50, 8 February 2016

OCA — Mon, 08 Feb 2016 15:50:22 GMT

←Older revision		Revision as of 15:50, 8 February 2016
Line 18:		Line 18:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yw6 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	== References ==		== References ==

OCA at 13:07, 10 September 2015

OCA — Thu, 10 Sep 2015 13:07:23 GMT

←Older revision		Revision as of 13:07, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='1yw6' size='340' side='right' caption='[[1yw6]], [[Resolution\|resolution]] 3.10Å' scene=''>		<StructureSection load='1yw6' size='340' side='right' caption='[[1yw6]], [[Resolution\|resolution]] 3.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1yw6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Escherichia_coli Escherichia~~ coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YW6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YW6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1yw6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YW6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YW6 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">astE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 ~~Escherichia~~ coli])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">astE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yw6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yw6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1yw6 RCSB], [http://www.ebi.ac.uk/pdbsum/1yw6 PDBsum], [http://www.topsan.org/Proteins/NESGC/1yw6 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yw6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yw6 OCA], [http://pdbe.org/1yw6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1yw6 RCSB], [http://www.ebi.ac.uk/pdbsum/1yw6 PDBsum], [http://www.topsan.org/Proteins/NESGC/1yw6 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 24:		Line 24:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Escherichia~~ coli]]	+	[[Category: Bacillus coli migula 1895]]
	[[Category: Acton, T B]]		[[Category: Acton, T B]]
	[[Category: Ciano, M]]		[[Category: Ciano, M]]

OCA at 00:26, 25 December 2014

OCA — Thu, 25 Dec 2014 00:26:54 GMT

←Older revision		Revision as of 00:26, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1yw6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YW6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YW6 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1yw6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YW6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YW6 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">astE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">astE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yw6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yw6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1yw6 RCSB], [http://www.ebi.ac.uk/pdbsum/1yw6 PDBsum], [http://www.topsan.org/Proteins/NESGC/1yw6 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yw6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yw6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1yw6 RCSB], [http://www.ebi.ac.uk/pdbsum/1yw6 PDBsum], [http://www.topsan.org/Proteins/NESGC/1yw6 TOPSAN]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/ASTE_ECOLI ASTE_ECOLI]] Transforms N(2)-succinylglutamate into succinate and glutamate.<ref>PMID:9696779</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 18:		Line 20:
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
-	[[Category: Acton, T B.]]	+	[[Category: Acton, T B]]
-	[[Category: Ciano, M.]]	+	[[Category: Ciano, M]]
-	[[Category: Forouhar, F.]]	+	[[Category: Forouhar, F]]
-	[[Category: Hunt, J F.]]	+	[[Category: Hunt, J F]]
-	[[Category: Kuzin, A P.]]	+	[[Category: Kuzin, A P]]
-	[[Category: Montelione, G T.]]	+	[[Category: Montelione, G T]]
-	[[Category: ~~NESG, Northeast~~ Structural ~~Genomics Consortium.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Tong, L.]]	+	[[Category: Tong, L]]
-	[[Category: Yong, W.]]	+	[[Category: Yong, W]]
-	[[Category: Alpha-beta protein.]]	+	[[Category: Alpha-beta protein]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]
	[[Category: Nesg]]		[[Category: Nesg]]
-	[[Category: ~~Northeast structural genomics consortium]]~~	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category:~~ Protein structure initiative]]	+
-	~~[[Category: Psi]]~~	+
-	~~[[Category: Structural genomic~~]]	+

OCA at 20:15, 29 September 2014

OCA — Mon, 29 Sep 2014 20:15:20 GMT

←Older revision		Revision as of 20:15, 29 September 2014
Line 1:		Line 1:
-	~~[[Image:1yw6.png\|left\|200px]]~~	+	==Crystal Structure of Succinylglutamate Desuccinylase from Escherichia coli, Northeast Structural Genomics Target ET72.==
-		+	<StructureSection load='1yw6' size='340' side='right' caption='[[1yw6]], [[Resolution\|resolution]] 3.10Å' scene=''>
-	~~{{STRUCTURE_1yw6\| PDB=1yw6 \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[1yw6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YW6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YW6 FirstGlance]. <br>
-	===Crystal Structure of Succinylglutamate Desuccinylase from Escherichia coli, Northeast Structural Genomics Target ET72.===	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br>
-		+	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">astE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])</td></tr>
-	==~~About this Structure~~==	+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yw6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yw6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1yw6 RCSB], [http://www.ebi.ac.uk/pdbsum/1yw6 PDBsum], [http://www.topsan.org/Proteins/NESGC/1yw6 TOPSAN]</span></td></tr>
-	[[1yw6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YW6 OCA].	+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yw/1yw6_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Acton, T B.]]		[[Category: Acton, T B.]]

OCA: Protected "1yw6" [edit=sysop:move=sysop]

OCA — Sat, 05 Jan 2013 17:54:15 GMT

Protected "1yw6" [edit=sysop:move=sysop]

←Older revision

Revision as of 17:54, 5 January 2013

OCA at 17:54, 5 January 2013

OCA — Sat, 05 Jan 2013 17:54:12 GMT

←Older revision		Revision as of 17:54, 5 January 2013
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-	{{Seed}}
	[[Image:1yw6.png\|left\|200px]]		[[Image:1yw6.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1yw6", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_1yw6\| PDB=1yw6 \| SCENE= }}		{{STRUCTURE_1yw6\| PDB=1yw6 \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	~~1YW6~~ is a 2 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YW6 OCA].	+	[[1yw6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YW6 OCA].
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Acton, T B.]]		[[Category: Acton, T B.]]
Line 26:		Line 19:
	[[Category: Yong, W.]]		[[Category: Yong, W.]]
	[[Category: Alpha-beta protein.]]		[[Category: Alpha-beta protein.]]
		+	[[Category: Hydrolase]]
	[[Category: Nesg]]		[[Category: Nesg]]
	[[Category: Northeast structural genomics consortium]]		[[Category: Northeast structural genomics consortium]]
Line 31:		Line 25:
	[[Category: Psi]]		[[Category: Psi]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 14:44:31 2008''

OCA at 12:44, 16 November 2008

OCA — Sun, 16 Nov 2008 12:44:33 GMT

←Older revision		Revision as of 12:44, 16 November 2008
Line 14:		Line 14:

	==About this Structure==		==About this Structure==
-	1YW6 is a ~~[[Single protein]]~~ structure of ~~sequence~~ from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YW6 OCA].	+	1YW6 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YW6 OCA].
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
-	[[Category: Single protein]]
	[[Category: Acton, T B.]]		[[Category: Acton, T B.]]
	[[Category: Ciano, M.]]		[[Category: Ciano, M.]]
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	[[Category: Structural genomic]]		[[Category: Structural genomic]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun ~~Sep 28 22~~:03:28 2008''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 14:44:31 2008''